12-122012543-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122012543
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122012543
    reference: chr 12
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.258-45T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.351-45T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-45T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.240-45T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-45T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.351-45T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-45T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.346-45T>C
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 12774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2557
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10313
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6826
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3992
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

12-122012544-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122012544
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122012544
    reference: chr 12
allele count: 2
allele frequency: 1.66602802259134e-5
allele num: 120046
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.351-46G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.351-46G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-46G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.240-46G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.346-46G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-46G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-46G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.258-46G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5210
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12810
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2575
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10308
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4668
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

12-122012546-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122012546
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122012546
    reference: chr 12
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.351-48C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.351-48C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-48C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.240-48C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-48C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.346-48C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.258-48C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-48C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9753
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6719
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

12-122012547-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122012547
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122012547
    reference: chr 12
allele count: 1
allele frequency: 8.332638946754437e-6
allele num: 120010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.240-49T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-49T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.351-49T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.258-49T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.351-49T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-49T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.346-49T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-49T>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3796
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

12-122012548-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122012548
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122012548
    reference: chr 12
allele count: 1
allele frequency: 8.343484572897024e-6
allele num: 119854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-50C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.240-50C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.258-50C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.351-50C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-50C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.351-50C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.346-50C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-50C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12367
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4027
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3964
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

12-122012549-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122012549
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122012549
    reference: chr 12
allele count: 2
allele frequency: 1.671458180116333e-5
allele num: 119656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.346-51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.351-51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.240-51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.351-51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.258-51G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4600
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10301
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6034
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4588
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4953
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

12-122012550-TAGAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122012550
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122012546
    reference: chr 12
allele count: 1
allele frequency: 8.356592515835743e-6
allele num: 119666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-56_-1-53delGTCT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.351-56_351-53delGTCT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-56_272-53delGTCT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-56_-1-53delGTCT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.346-56_346-53delGTCT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.240-56_240-53delGTCT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.351-56_351-53delGTCT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.258-56_258-53delGTCT
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10302
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4902
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4217
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: TAGAC
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

12-122013638-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013638
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013638
    reference: chr 12
allele count: 1
allele frequency: 8.29228651508367e-6
allele num: 120594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+48A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+48A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+48A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1140A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+48A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1140A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1140A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+48A>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4644
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4807
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-122013641-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013641
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013641
    reference: chr 12
allele count: 1
allele frequency: 8.293386853323161e-6
allele num: 120578
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1143A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+45A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1143A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+45A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+45A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+45A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1143A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+45A>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10141
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4802
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24577
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

12-122013653-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013653
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013653
    reference: chr 12
allele count: 14
allele frequency: 1.160785354205359e-4
allele num: 120608
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1155G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1155G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1155G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4615
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4786
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

12-122013653-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013653
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013652
    reference: chr 12
allele count: 1
allele frequency: 8.29132395860971e-6
allele num: 120608
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1156delC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1156delC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+32delC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1156delC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+32delC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+32delC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+32delC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+32delC
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24555
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5453
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4615
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: CG
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

12-122013654-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013654
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013654
    reference: chr 12
allele count: 45
allele frequency: 3.729487817006464e-4
allele num: 120660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1156C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1156C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1156C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+32C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8857
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9350
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10241
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24577
  bin: 9.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11005
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4624
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 2
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

12-122013656-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013656
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013656
    reference: chr 12
allele count: 2
allele frequency: 1.657302905251993e-5
allele num: 120678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+30C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1158C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+30C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+30C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1158C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+30C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1158C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+30C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2780
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

12-122013657-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013657
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013657
    reference: chr 12
allele count: 1
allele frequency: 8.285965232089886e-6
allele num: 120686
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+29C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+29C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+29C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+29C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1159C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1159C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+29C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1159C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5516
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-122013660-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013660
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013661
    reference: chr 12
allele count: 1
allele frequency: 8.285141427364165e-6
allele num: 120698
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+25dupC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+25dupC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1163dupC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+25dupC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1163dupC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+25dupC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+25dupC
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1163dupC
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24543
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4818
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

12-122013662-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013662
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013661
    reference: chr 12
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1165delT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+23delT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+23delT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+23delT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1165delT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+23delT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+23delT
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1165delT
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11321
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2783
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: GA
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

12-122013676-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013676
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013676
    reference: chr 12
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.345+10T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1178T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.350+10T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1178T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.350+10T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1178T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.239+10T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.257+10T>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4626
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4815
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

12-122013692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013692
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013692
    reference: chr 12
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.344G>A
  hgvsp: ENSP00000366271.3:p.Gly115Glu
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1194G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.344G>A
  hgvsp: ENSP00000474307.1:p.Gly115Glu
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.339G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.233G>A
  hgvsp: ENSP00000398279.2:p.Gly78Glu
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1194G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.251G>A
  hgvsp: ENSP00000366269.3:p.Gly84Glu
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1194G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4817
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24540
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4624
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly115Glu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

12-122013710-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013710
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013710
    reference: chr 12
allele count: 2
allele frequency: 1.656232402530723e-5
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.326G>A
  hgvsp: ENSP00000366271.3:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.326G>A
  hgvsp: ENSP00000474307.1:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1212G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.215G>A
  hgvsp: ENSP00000398279.2:p.Arg72Gln
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.233G>A
  hgvsp: ENSP00000366269.3:p.Arg78Gln
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1212G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1212G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.321G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11539
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg109Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

12-122013717-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013717
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013717
    reference: chr 12
allele count: 3
allele frequency: 2.484266313348791e-5
allele num: 120760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1219A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.319A>G
  hgvsp: ENSP00000474307.1:p.Ile107Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.314A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1219A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.319A>G
  hgvsp: ENSP00000366271.3:p.Ile107Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.208A>G
  hgvsp: ENSP00000398279.2:p.Ile70Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.226A>G
  hgvsp: ENSP00000366269.3:p.Ile76Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1219A>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile107Val
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

12-122013720-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013720
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013720
    reference: chr 12
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.311C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.316C>T
  hgvsp: ENST00000377071.4:c.316C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.223C>T
  hgvsp: ENST00000377069.4:c.223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1222C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1222C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1222C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.316C>T
  hgvsp: ENST00000538046.2:c.316C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.205C>T
  hgvsp: ENST00000446152.2:c.205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4814
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5517
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4623
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu106Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

12-122013747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013747
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013747
    reference: chr 12
allele count: 11
allele frequency: 9.110485340400861e-5
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1249G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.289G>A
  hgvsp: ENSP00000366271.3:p.Val97Ile
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1249G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.284G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.178G>A
  hgvsp: ENSP00000398279.2:p.Val60Ile
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.196G>A
  hgvsp: ENSP00000366269.3:p.Val66Ile
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1249G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.289G>A
  hgvsp: ENSP00000474307.1:p.Val97Ile
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5511
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4621
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val97Ile
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

12-122013791-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013791
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013791
    reference: chr 12
allele count: 1
allele frequency: 8.28953694646617e-6
allele num: 120634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1293C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1293C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1293C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.272-27C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.272-27C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.161-27C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.179-27C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.267-27C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10829
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4788
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

12-122013804-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013804
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013804
    reference: chr 12
allele count: 36
allele frequency: 2.986610031691251e-4
allele num: 120538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1306G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.161-40G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1306G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.272-40G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1306G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.272-40G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.179-40G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.267-40G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8003
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8080
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9211
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

12-122013805-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013805
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013805
    reference: chr 12
allele count: 2
allele frequency: 1.659448067572725e-5
allele num: 120522
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.272-41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.179-41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.161-41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1307C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1307C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1307C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.272-41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.267-41C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4717
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9169
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24506
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4593
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

12-122013812-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013812
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013812
    reference: chr 12
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.267-48G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1314G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1314G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.272-48G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1314G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.272-48G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.179-48G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.161-48G>C
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4634
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24499
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

12-122013812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122013812
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122013812
    reference: chr 12
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.272-48G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-1-1314G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.272-48G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.272-1314G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.179-48G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-1-1314G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.161-48G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.267-48G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4721
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

12-122016656-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016656
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016656
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 71124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+51G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+51G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16955
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11295
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3648
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

12-122016657-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016657
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016657
    reference: chr 12
allele count: 4
allele frequency: 5.628253834247925e-5
allele num: 71070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+50C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+50C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+50C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+50C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+50C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+50C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+50C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+50C>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16969
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10159
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18320
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4452
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3619
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1219
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5125
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11995
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

12-122016666-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016666
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016666
    reference: chr 12
allele count: 1
allele frequency: 1.381139163582122e-5
allele num: 72404
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+41C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+41C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7095
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7503
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

12-122016666-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016666
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016666
    reference: chr 12
allele count: 3
allele frequency: 4.143417490746368e-5
allele num: 72404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+41C>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17198
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7095
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8437
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5747
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5152
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

12-122016674-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016674
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016674
    reference: chr 12
allele count: 2
allele frequency: 2.677017802168384e-5
allele num: 74710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+33G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+33G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13829
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

12-122016675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016675
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016675
    reference: chr 12
allele count: 1
allele frequency: 1.329433661260303e-5
allele num: 75220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+32C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+32C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15112
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3825
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17210
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4654
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

12-122016675-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016675
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016675
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 75220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+32C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+32C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+32C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+32C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+32C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+32C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+32C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+32C>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17414
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17210
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4654
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12984
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3825
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

12-122016683-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016683
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016683
    reference: chr 12
allele count: 1
allele frequency: 1.271423485734629e-5
allele num: 78652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+24G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+24G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+24G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+24G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+24G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+24G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+24G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+24G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4027
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3041
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3043
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

12-122016689-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016689
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016689
    reference: chr 12
allele count: 5
allele frequency: 5.850416549658336e-5
allele num: 85464
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+18C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+18C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+18C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+18C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+18C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+18C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+18C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+18C>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25170
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8294
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15515
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2953
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23914
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3443
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ

12-122016694-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016694
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016694
    reference: chr 12
allele count: 1
allele frequency: 1.097092704333516e-5
allele num: 91150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+13C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+13C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+13C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+13C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+13C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+13C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+13C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+13C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12848
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6443
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4425
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

12-122016695-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016695
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016695
    reference: chr 12
allele count: 1
allele frequency: 1.085446335533171e-5
allele num: 92128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+12C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+12C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+12C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+12C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+12C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+12C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+12C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+12C>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4534
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

12-122016700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016700
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016700
    reference: chr 12
allele count: 1
allele frequency: 1.024107490322184e-5
allele num: 97646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-2+7C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.271+7C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.178+7C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-2+7C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.271+7C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.266+7C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.160+7C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.271+7C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5203
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10695
  bin: 2.25e1
  variant carriers: 0
hgvs: c.271+7C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

12-122016714-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016714
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016714
    reference: chr 12
allele count: 1
allele frequency: 9.119428029473991e-6
allele num: 109656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.259G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.171G>A
  hgvsp: ENST00000377069.4:c.171G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.264G>A
  hgvsp: ENST00000538046.2:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.264G>A
  hgvsp: ENST00000377071.4:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.264G>A
  hgvsp: ENST00000543025.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.153G>A
  hgvsp: ENST00000446152.2:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38066
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu88Glu
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

12-122016722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016722
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016722
    reference: chr 12
allele count: 34
allele frequency: 3.00289691231541e-4
allele num: 113224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.163G>A
  hgvsp: ENSP00000366269.3:p.Ala55Thr
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-17G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.256G>A
  hgvsp: ENSP00000366271.3:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.256G>A
  hgvsp: ENSP00000474307.1:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.256G>A
  hgvsp: ENSP00000438138.1:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.251G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.145G>A
  hgvsp: ENSP00000398279.2:p.Ala49Thr
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 39697
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 9.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3558
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala86Thr
num of homozygotes: 1
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

12-122016734-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016734
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016734
    reference: chr 12
allele count: 3
allele frequency: 2.570958453311395e-5
allele num: 116688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.239G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.133G>A
  hgvsp: ENSP00000398279.2:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.151G>A
  hgvsp: ENSP00000366269.3:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.244G>A
  hgvsp: ENSP00000366271.3:p.Asp82Asn
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-29G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-29G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.244G>A
  hgvsp: ENSP00000474307.1:p.Asp82Asn
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.244G>A
  hgvsp: ENSP00000438138.1:p.Asp82Asn
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp82Asn
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

12-122016739-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016739
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016739
    reference: chr 12
allele count: 1
allele frequency: 8.512521919743944e-6
allele num: 117474
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.239A>G
  hgvsp: ENSP00000438138.1:p.Gln80Arg
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.239A>G
  hgvsp: ENSP00000366271.3:p.Gln80Arg
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.128A>G
  hgvsp: ENSP00000398279.2:p.Gln43Arg
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-34A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.234A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.239A>G
  hgvsp: ENSP00000474307.1:p.Gln80Arg
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.146A>G
  hgvsp: ENSP00000366269.3:p.Gln49Arg
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-34A>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42635
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln80Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

12-122016761-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016761
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016761
    reference: chr 12
allele count: 1
allele frequency: 8.39278220730172e-6
allele num: 119150
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-56A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.212A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-56A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.217A>G
  hgvsp: ENSP00000438138.1:p.Lys73Glu
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.124A>G
  hgvsp: ENSP00000366269.3:p.Lys42Glu
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.217A>G
  hgvsp: ENSP00000366271.3:p.Lys73Glu
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.217A>G
  hgvsp: ENSP00000474307.1:p.Lys73Glu
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.106A>G
  hgvsp: ENSP00000398279.2:p.Lys36Glu
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12452
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7063
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys73Glu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

12-122016770-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016770
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016770
    reference: chr 12
allele count: 1
allele frequency: 8.379420144126027e-6
allele num: 119340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.97C>G
  hgvsp: ENSP00000398279.2:p.Leu33Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.208C>G
  hgvsp: ENSP00000366271.3:p.Leu70Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-65C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.208C>G
  hgvsp: ENSP00000474307.1:p.Leu70Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.115C>G
  hgvsp: ENSP00000366269.3:p.Leu39Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.208C>G
  hgvsp: ENSP00000438138.1:p.Leu70Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-65C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.203C>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2648
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43819
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu70Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

12-122016792-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016792
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016792
    reference: chr 12
allele count: 2
allele frequency: 1.672576436743159e-5
allele num: 119576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-87C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.186C>T
  hgvsp: ENST00000377071.4:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.181C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-87C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.186C>T
  hgvsp: ENST00000543025.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.93C>T
  hgvsp: ENST00000377069.4:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.75C>T
  hgvsp: ENST00000446152.2:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.186C>T
  hgvsp: ENST00000538046.2:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile62Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

12-122016792-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016792
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016792
    reference: chr 12
allele count: 1
allele frequency: 8.362882183715796e-6
allele num: 119576
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-87C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.75C>G
  hgvsp: ENSP00000398279.2:p.Ile25Met
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.186C>G
  hgvsp: ENSP00000474307.1:p.Ile62Met
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.181C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.93C>G
  hgvsp: ENSP00000366269.3:p.Ile31Met
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-87C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.186C>G
  hgvsp: ENSP00000438138.1:p.Ile62Met
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.186C>G
  hgvsp: ENSP00000366271.3:p.Ile62Met
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7108
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile62Met
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/12-122016807-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016807
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016807
    reference: chr 12
allele count: 4
allele frequency: 3.34520882466088e-5
allele num: 119574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.60G>T
  hgvsp: ENST00000446152.2:c.60G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.171G>T
  hgvsp: ENST00000377071.4:c.171G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-102G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.78G>T
  hgvsp: ENST00000377069.4:c.78G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.171G>T
  hgvsp: ENST00000538046.2:c.171G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-102G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.166G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.171G>T
  hgvsp: ENST00000543025.1:c.171G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser57Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

12-122016810-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016810
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016810
    reference: chr 12
allele count: 1
allele frequency: 8.365400702693659e-6
allele num: 119540
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.168G>A
  hgvsp: ENST00000538046.2:c.168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.57G>A
  hgvsp: ENST00000446152.2:c.57G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.75G>A
  hgvsp: ENST00000377069.4:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.163G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.168G>A
  hgvsp: ENST00000543025.1:c.168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.168G>A
  hgvsp: ENST00000377071.4:c.168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-105G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-105G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu56Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

12-122016834-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016834
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016834
    reference: chr 12
allele count: 1
allele frequency: 8.391514500537057e-6
allele num: 119168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.144G>A
  hgvsp: ENST00000543025.1:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.33G>A
  hgvsp: ENST00000446152.2:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.139G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-129G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-129G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.144G>A
  hgvsp: ENST00000538046.2:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.144G>A
  hgvsp: ENST00000377071.4:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.51G>A
  hgvsp: ENST00000377069.4:c.51G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12712
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7069
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln48Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-122016845-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016845
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016845
    reference: chr 12
allele count: 1
allele frequency: 8.426729586247577e-6
allele num: 118670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-140A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.128A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.133A>G
  hgvsp: ENSP00000438138.1:p.Ile45Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.133A>G
  hgvsp: ENSP00000366271.3:p.Ile45Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-140A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.40A>G
  hgvsp: ENSP00000366269.3:p.Ile14Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.133A>G
  hgvsp: ENSP00000474307.1:p.Ile45Val
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.22A>G
  hgvsp: ENSP00000398279.2:p.Ile8Val
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43197
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile45Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

12-122016848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016848
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016848
    reference: chr 12
allele count: 3
allele frequency: 2.534854245880862e-5
allele num: 118350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.130C>T
  hgvsp: ENSP00000366271.3:p.Pro44Ser
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-143C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.130C>T
  hgvsp: ENSP00000438138.1:p.Pro44Ser
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-143C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.37C>T
  hgvsp: ENSP00000366269.3:p.Pro13Ser
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.125C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.130C>T
  hgvsp: ENSP00000474307.1:p.Pro44Ser
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.19C>T
  hgvsp: ENSP00000398279.2:p.Pro7Ser
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro44Ser
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

12-122016856-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016856
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016856
    reference: chr 12
allele count: 1
allele frequency: 8.481044864727334e-6
allele num: 117910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-5C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-5C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-5C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-5C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-5C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-5C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-5C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-5C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 40021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 7.25e1
  variant carriers: 0
hgvs: c.127-5C>T
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

12-122016859-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016859
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016859
    reference: chr 12
allele count: 9
allele frequency: 7.653451706719731e-5
allele num: 117594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-8C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-8C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-8C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-8C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-8C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-8C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-8C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-8C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39781
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41883
  bin: 6.25e1
  variant carriers: 0
hgvs: c.127-8C>T
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/12-122016861-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016861
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016861
    reference: chr 12
allele count: 1
allele frequency: 8.518032675173342e-6
allele num: 117398
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-10G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-10G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-10G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-10G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-10G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-10G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-10G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-10G>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41666
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2609
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/12-122016862-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016862
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016862
    reference: chr 12
allele count: 1
allele frequency: 8.526603001364257e-6
allele num: 117280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-11G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-11G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-11G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-11G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-11G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-11G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-11G>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-11G>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

12-122016869-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016869
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016869
    reference: chr 12
allele count: 1
allele frequency: 8.588409083101446e-6
allele num: 116436
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-18T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-18T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-18T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-18T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-18T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-18T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-18T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-18T>C
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ

12-122016872-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016872
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016872
    reference: chr 12
allele count: 3
allele frequency: 2.582955934771753e-5
allele num: 116146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-21C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-21C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-21C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-21C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-21C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-21C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-21C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-21C>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

12-122016877-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016877
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016877
    reference: chr 12
allele count: 1
allele frequency: 8.650369370772131e-6
allele num: 115602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-26G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-26G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-26G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-26G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-26G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-26G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-26G>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-26G>C
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39795
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2584
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6693
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

12-122016877-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016877
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016877
    reference: chr 12
allele count: 5
allele frequency: 4.325184685386066e-5
allele num: 115602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-26G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-26G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-26G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-26G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-26G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-26G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-26G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-26G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

12-122016883-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016883
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016883
    reference: chr 12
allele count: 1
allele frequency: 8.697316008279845e-6
allele num: 114978
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-32T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-32T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-32T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-32T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-32T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-32T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-32T>C
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-32T>C
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

12-122016891-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016891
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016891
    reference: chr 12
allele count: 2
allele frequency: 1.754693805930865e-5
allele num: 113980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-40C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-40C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-40C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-40C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-40C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-40C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-40C>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-40C>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum

12-122016892-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016892
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016892
    reference: chr 12
allele count: 1
allele frequency: 8.774238834781082e-6
allele num: 113970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-41C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-41C>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11000
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4589
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37649
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

12-122016894-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016894
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016894
    reference: chr 12
allele count: 1
allele frequency: 8.786574114752658e-6
allele num: 113810
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-43C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-43C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-43C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-43C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-43C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-43C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-43C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-43C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36498
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10957
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2575
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

12-122016895-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016895
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016895
    reference: chr 12
allele count: 1
allele frequency: 8.81414493979939e-6
allele num: 113454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-44C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-44C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-44C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-44C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-44C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-44C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-44C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-44C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36941
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

12-122016895-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016895
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016895
    reference: chr 12
allele count: 249
allele frequency: 2.194722090010048e-3
allele num: 113454
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-44C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-44C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-44C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-44C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-44C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-44C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-44C>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-44C>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 36056
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10772
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 1
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

12-122016905-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016905
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016905
    reference: chr 12
allele count: 1
allele frequency: 8.894106764857605e-6
allele num: 112434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-54C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-54C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-54C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-54C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-54C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-54C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-54C>T
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-54C>T
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36178
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-122016916-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016916
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016916
    reference: chr 12
allele count: 1
allele frequency: 8.991835413444593e-6
allele num: 111212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-65A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-65A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-65A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-65A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-65A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-65A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-65A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-65A>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10322
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-122016928-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016928
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016928
    reference: chr 12
allele count: 2
allele frequency: 1.814618567177179e-5
allele num: 110216
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-77A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-77A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-77A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-77A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-77A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-77A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-77A>G
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-77A>G
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31456
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4083
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

12-122016930-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122016930
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122016930
    reference: chr 12
allele count: 1
allele frequency: 9.088265231932529e-6
allele num: 110032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-79T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-79T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.16-79T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-79T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-146-79T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-79T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.122-79T>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.34-79T>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

12-122017476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 122017476
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 122017476
    reference: chr 12
allele count: 3
allele frequency: 2.44140625e-4
allele num: 12288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl transcript: ENST00000540191
  gene symbol: KDM2B
  hgvsc: ENST00000540191.1:n.121+449G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366271
  ensembl transcript: ENST00000377071
  gene symbol: KDM2B
  hgvsc: ENST00000377071.4:c.127-625G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000366269
  ensembl transcript: ENST00000377069
  gene symbol: KDM2B
  hgvsc: ENST00000377069.4:c.33+449G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000474307
  ensembl transcript: ENST00000538046
  gene symbol: KDM2B
  hgvsc: ENST00000538046.2:c.127-625G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000438138
  ensembl transcript: ENST00000543025
  gene symbol: KDM2B
  hgvsc: ENST00000543025.1:c.127-625G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000445196
  ensembl transcript: ENST00000536437
  gene symbol: KDM2B
  hgvsc: ENST00000536437.1:c.-146-625G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000398279
  ensembl transcript: ENST00000446152
  gene symbol: KDM2B
  hgvsc: ENST00000446152.2:c.15+41G>A
  variant of: http://identifiers.org/hgnc/13610
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089094
  ensembl protein: ENSP00000440373
  ensembl transcript: ENST00000539394
  gene symbol: KDM2B
  hgvsc: ENST00000539394.1:c.-147+449G>A
  variant of: http://identifiers.org/hgnc/13610
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12588
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4691
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3216
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2771
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.868e0

MQRankSum
type: SiteQuality
SIO_000300: -3.224e0

DP
type: SiteQuality
SIO_000300: 1.969267e6

MQ
type: SiteQuality
SIO_000300: 5.812e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

FS
type: SiteQuality
SIO_000300: 5.1482e1

QD
type: SiteQuality
SIO_000300: 1.625e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014227152158187e-5
allele num: 66352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.766e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 1.968657e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 1.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.76e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507204437209863e-5
allele num: 66348
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.8e-1

DP
type: SiteQuality
SIO_000300: 1.963806e6

FS
type: SiteQuality
SIO_000300: 1.4047e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.812e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

GenotypeQuality
all individuals: 1722
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3180
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507431637975218e-5
allele num: 66338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.073e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: -5.21e0

FS
type: SiteQuality
SIO_000300: 4.667e0

VQSLOD
type: SiteQuality
SIO_000300: -2.613e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.960804e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.488e0

MQ
type: SiteQuality
SIO_000300: 4.223e1

GenotypeQuality
all individuals: 166
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6591
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.02880658436214e-4
allele num: 9720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.67e0

QD
type: SiteQuality
SIO_000300: 1.002e1

DP
type: SiteQuality
SIO_000300: 1.957966e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 1.689e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 244
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1760
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variant carriers: 0

GenotypeQuality
all individuals: 1798
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511213201958532e-5
allele num: 66172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 2.821e1

VQSLOD
type: SiteQuality
SIO_000300: -1.761e0

MQRankSum
type: SiteQuality
SIO_000300: 7.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.52e-1

DP
type: SiteQuality
SIO_000300: 1.952958e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.56e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4607
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511350240304688e-5
allele num: 66166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
SIO_000300: 3.124e1

MQRankSum
type: SiteQuality
SIO_000300: -4.739e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e0

VQSLOD
type: SiteQuality
SIO_000300: -1.961e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.952748e6

MQ
type: SiteQuality
SIO_000300: 4.104e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.576105e6

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e0

MQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

QD
type: SiteQuality
SIO_000300: 1.597e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.538e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5421
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.115e1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.437e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5453
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variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.950019500195002e-4
allele num: 66666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 3.002e0

DP
type: SiteQuality
SIO_000300: 2.584189e6

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.967e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.299e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4181
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021867974657674e-4
allele num: 9786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

DP
type: SiteQuality
SIO_000300: 2.584189e6

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.967e0

QD
type: SiteQuality
SIO_000300: 1.299e1

FS
type: SiteQuality
SIO_000300: 3.002e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.249550089982004e-4
allele num: 66680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 30
allele frequency: 1.820609297244811e-3
allele num: 16478
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.62e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

QD
type: SiteQuality
SIO_000300: 1.459e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.583824e6

GenotypeQuality
all individuals: 75
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 24546
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 2.042066571370227e-4
allele num: 9794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.167e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 2.583295e6

FS
type: SiteQuality
SIO_000300: 1.323e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.412e1

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2778
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variant carriers: 0

GenotypeQuality
all individuals: 4819
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.331e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

DP
type: SiteQuality
SIO_000300: 2.583441e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2783
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 4625
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

MQ
type: SiteQuality
SIO_000300: 6.102e1

QD
type: SiteQuality
SIO_000300: 1.369e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.35e-1

DP
type: SiteQuality
SIO_000300: 2.584101e6

FS
type: SiteQuality
SIO_000300: 9.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

FS
type: SiteQuality
SIO_000300: 4.342e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.35e-1

MQ
type: SiteQuality
SIO_000300: 6.075e1

DP
type: SiteQuality
SIO_000300: 2.584556e6

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.652e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24540
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

DP
type: SiteQuality
SIO_000300: 2.58585e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.092e1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 10
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.499e0

QD
type: SiteQuality
SIO_000300: 9.09e0

VQSLOD
type: SiteQuality
SIO_000300: -1.449e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.728e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

DP
type: SiteQuality
SIO_000300: 2.586491e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: -1.759e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.19e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24540
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.107e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.69e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.586893e6

VQSLOD
type: SiteQuality
SIO_000300: 6.08e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 24539
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2357
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.041232904674423e-4
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

DP
type: SiteQuality
SIO_000300: 2.586818e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

QD
type: SiteQuality
SIO_000300: 1.372e1

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

DP
type: SiteQuality
SIO_000300: 2.586562e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.275e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.91085003455425e-4
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.98e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 2.586714e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

QD
type: SiteQuality
SIO_000300: 1.189e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.269e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.501e-1

DP
type: SiteQuality
SIO_000300: 2.5774e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.586e0

GenotypeQuality
all individuals: 288
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 36

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4727
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729505361466621e-4
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.432498175626368e-4
allele num: 16444
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.022076860179886e-4
allele num: 9784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.20268972142171e-4
allele num: 66624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.376e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

DP
type: SiteQuality
SIO_000300: 2.557451e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.022285831118381e-4
allele num: 9782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.755e0

MQRankSum
type: SiteQuality
SIO_000300: -2.383e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

DP
type: SiteQuality
SIO_000300: 2.555135e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.599e0

QD
type: SiteQuality
SIO_000300: 1.432e1

GenotypeQuality
all individuals: 700
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e-1

QD
type: SiteQuality
SIO_000300: 1.484e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 2.544605e6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.756e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-1

DP
type: SiteQuality
SIO_000300: 2.544605e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.74e-1

QD
type: SiteQuality
SIO_000300: 1.484e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41022
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.327e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 6.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.14153e5

GenotypeQuality
all individuals: 147
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 4674
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 7677
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2405
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 8.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 4.829751267809708e-4
allele num: 8282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.15709e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

QD
type: SiteQuality
SIO_000300: 1.01e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

GenotypeQuality
all individuals: 5152
bin: 2.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.398196556189745e-5
allele num: 41698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3822
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

QD
type: SiteQuality
SIO_000300: 1.001e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

DP
type: SiteQuality
SIO_000300: 7.53853e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1966
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7303
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 5.217391304347826e-4
allele num: 5750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5144
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

QD
type: SiteQuality
SIO_000300: 1.001e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.53853e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4734
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GenotypeQuality
all individuals: 1477
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42906
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.307869836141242e-4
allele num: 8666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5338
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.426e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

QD
type: SiteQuality
SIO_000300: 1.262e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 8.18089e5

GenotypeQuality
all individuals: 982
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
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GenotypeQuality
all individuals: 6453
bin: 3.25e1
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GenotypeQuality
all individuals: 280
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variant carriers: 1

GenotypeQuality
all individuals: 1363
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1957
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variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 12984
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variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.476473501733531e-4
allele num: 4038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5364
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-2

FS
type: SiteQuality
SIO_000300: 4.821e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

QD
type: SiteQuality
SIO_000300: 8.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

DP
type: SiteQuality
SIO_000300: 8.30303e5

GenotypeQuality
all individuals: 280
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6453
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5944
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
SIO_000300: 4.821e0

QD
type: SiteQuality
SIO_000300: 8.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

DP
type: SiteQuality
SIO_000300: 8.30303e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.319109461966605e-4
allele num: 4312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7786
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.295e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.799999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.34e-1

DP
type: SiteQuality
SIO_000300: 9.04486e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3478
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 7.352941176470588e-4
allele num: 6800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48594
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

QD
type: SiteQuality
SIO_000300: 1.102e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 1.619e0

DP
type: SiteQuality
SIO_000300: 1.012903e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 9.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.547450830628223e-5
allele num: 10474
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.084e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.804e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

QD
type: SiteQuality
SIO_000300: 1.226e1

DP
type: SiteQuality
SIO_000300: 1.087447e6

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

FS
type: SiteQuality
SIO_000300: 9.657e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.16e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1031
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5274
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.923002961424561e-5
allele num: 52002
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10620
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9396
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

BaseQRankSum
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SIO_000300: -1.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

QD
type: SiteQuality
SIO_000300: 1.515e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -1.806e0

DP
type: SiteQuality
SIO_000300: 1.097874e6

VQSLOD
type: SiteQuality
SIO_000300: -4.61e-2

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54814
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8028
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.40016802016242e-4
allele num: 7142
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5580
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.021e0

InbreedingCoeff
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SIO_000300: -3.0e-3

ClippingRankSum
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MQRankSum
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QD
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SIO_000300: 1.43e1

MQ
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-2

ReadPosRankSum
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SIO_000300: 7.24e-1

DP
type: SiteQuality
SIO_000300: 1.166813e6

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.636072118058964e-5
allele num: 61122
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9012
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8114
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13372
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.306047e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14270
num of homozygotes: 0

European (Finnish)
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allele count: 26
allele frequency: 4.068857589984351e-3
allele num: 6390
num of homozygotes: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.271900537377977e-4
allele num: 62898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.305e1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

DP
type: SiteQuality
SIO_000300: 1.349075e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.355e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.623294858342078e-4
allele num: 11436
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15394
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 1.339e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.075e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

FS
type: SiteQuality
SIO_000300: 4.821e0

VQSLOD
type: SiteQuality
SIO_000300: 6.69e-1

DP
type: SiteQuality
SIO_000300: 1.387497e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541449579184265e-5
allele num: 64874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15696
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.0e-3

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.396876e6

ReadPosRankSum
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.19e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523043650431021e-5
allele num: 65658
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQRankSum
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ClippingRankSum
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.415764e6

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.520496289989052e-5
allele num: 65768
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.89e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.172882946281961e-4
allele num: 8526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517404631118934e-5
allele num: 65902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.87e-1

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
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FS
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9698
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

FS
type: SiteQuality
SIO_000300: 4.38e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

QD
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SIO_000300: 1.303e1

DP
type: SiteQuality
SIO_000300: 1.422241e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.068513517613861e-5
allele num: 65914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9694
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

FS
type: SiteQuality
SIO_000300: 5.974e0

QD
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VQSLOD
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DP
type: SiteQuality
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MQ
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SIO_000300: 5.946e1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.42187e6

VQSLOD
type: SiteQuality
SIO_000300: -2.945e0

BaseQRankSum
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SIO_000300: -1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.891e1

FS
type: SiteQuality
SIO_000300: 3.889e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: -3.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

QD
type: SiteQuality
SIO_000300: 5.48e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.523043650431021e-5
allele num: 65658
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 3.107e0

VQSLOD
type: SiteQuality
SIO_000300: -1.563e0

DP
type: SiteQuality
SIO_000300: 1.416301e6

MQRankSum
type: SiteQuality
SIO_000300: 2.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.584e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530502923260583e-5
allele num: 65338
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.194e1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.517e0

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16170
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.603203829865586e-5
allele num: 65172
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.283e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.7712e1

BaseQRankSum
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SIO_000300: -2.5e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: -9.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.403584e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9514
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.540025256414205e-5
allele num: 64934
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.163e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.7799e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 5.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

DP
type: SiteQuality
SIO_000300: 1.396225e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9480
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 1.389532190829088e-4
allele num: 64770
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-2

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.311537490532694e-5
allele num: 15844
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64684
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9466
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.748e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.388794e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 279
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 41550
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GenotypeQuality
all individuals: 490
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547556408431087e-5
allele num: 64618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

DP
type: SiteQuality
SIO_000300: 1.38711e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.907e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.419e1

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557292802192668e-5
allele num: 64214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15492
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.373667e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.433e0

QD
type: SiteQuality
SIO_000300: 1.416e1

FS
type: SiteQuality
SIO_000300: 4.552e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559770401796856e-5
allele num: 64112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.303271210738955e-4
allele num: 15346
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.481e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.936e1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

FS
type: SiteQuality
SIO_000300: 1.6153e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.617e0

QD
type: SiteQuality
SIO_000300: 1.459e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.77e-1

DP
type: SiteQuality
SIO_000300: 1.368757e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565680288085173e-5
allele num: 63870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 1.471e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

DP
type: SiteQuality
SIO_000300: 1.361962e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.257e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.601531555320834e-5
allele num: 15148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.697040864255519e-5
allele num: 63870
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

QD
type: SiteQuality
SIO_000300: 1.257e1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 1.471e0

DP
type: SiteQuality
SIO_000300: 1.361962e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57217872527749e-5
allele num: 63606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.659e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.552e0

MQRankSum
type: SiteQuality
SIO_000300: -1.186e0

FS
type: SiteQuality
SIO_000300: 7.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.350172e6

QD
type: SiteQuality
SIO_000300: 1.768e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.165258126800241e-5
allele num: 63186
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.227e0

FS
type: SiteQuality
SIO_000300: 2.151e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.28e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63186
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.914672935970129e-5
allele num: 14462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9116
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.522e1

DP
type: SiteQuality
SIO_000300: 1.331131e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.629999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1587
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.942515967786726e-5
allele num: 14404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.85e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
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VQSLOD
type: SiteQuality
SIO_000300: -9.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

DP
type: SiteQuality
SIO_000300: 1.32897e6

GenotypeQuality
all individuals: 4602
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14270
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.104240282685512e-4
allele num: 9056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

QD
type: SiteQuality
SIO_000300: 1.433e1

VQSLOD
type: SiteQuality
SIO_000300: 6.35e0

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.332711e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6464
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4602
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36941
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 504
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 736
bin: 9.75e1
variant carriers: 248

GenotypeQuality
all individuals: 498
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 8.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8336
num of homozygotes: 0

African
type: Population
allele count: 223
allele frequency: 2.462455830388693e-2
allele num: 9056
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.42966069386199e-4
allele num: 62952
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 1.488877211420564e-3
allele num: 11418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14270
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.987e1

QD
type: SiteQuality
SIO_000300: 1.433e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.35e0

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

DP
type: SiteQuality
SIO_000300: 1.332711e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4801
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6435
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62488
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.196315486470927e-5
allele num: 13896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

QD
type: SiteQuality
SIO_000300: 7.77e0

VQSLOD
type: SiteQuality
SIO_000300: -4.649e-1

DP
type: SiteQuality
SIO_000300: 1.313309e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.298e0

GenotypeQuality
all individuals: 455
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4677
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2566
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1490
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.615195761726321e-5
allele num: 61912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.099e1

DP
type: SiteQuality
SIO_000300: 1.296397e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

GenotypeQuality
all individuals: 777
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1886
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2139
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6245
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2570
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627392266631949e-5
allele num: 61448
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.81057268722467e-5
allele num: 11350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.288595e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.22e0

QD
type: SiteQuality
SIO_000300: 1.535e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1909
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1551
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30351
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1398
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 865
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.62940754741576e-5
allele num: 61372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.17e0

VQSLOD
type: SiteQuality
SIO_000300: -1.926e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

DP
type: SiteQuality
SIO_000300: 1.290074e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1