11-8737370-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737370
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737370
    reference: chr 11
allele count: 3
allele frequency: 2.627522421524664e-5
allele num: 114176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000530559
  gene symbol: ST5
  hgvsc: ENST00000530559.1:n.8G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-5G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-151G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-5G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.1630-5G>A
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

11-8737371-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737371
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737371
    reference: chr 11
allele count: 8
allele frequency: 7.014098337658694e-5
allele num: 114056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000530559
  gene symbol: ST5
  hgvsc: ENST00000530559.1:n.7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-26C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-152C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-6C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-6C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.1630-6C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

11-8737373-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737373
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737373
    reference: chr 11
allele count: 1
allele frequency: 8.782098570274352e-6
allele num: 113868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-28C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-154C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000530559
  gene symbol: ST5
  hgvsc: ENST00000530559.1:n.5C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-8C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-8C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36230
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1630-8C>T
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

11-8737373-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737373
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737373
    reference: chr 11
allele count: 1
allele frequency: 8.782098570274352e-6
allele num: 113868
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-154C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-28C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000530559
  gene symbol: ST5
  hgvsc: ENST00000530559.1:n.5C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-8C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-8C>G
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1630-8C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

11-8737373-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737373
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737373
    reference: chr 11
allele count: 1
allele frequency: 8.782098570274352e-6
allele num: 113868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000530559
  gene symbol: ST5
  hgvsc: ENST00000530559.1:n.5C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-28C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-154C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-8C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-8C>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1630-8C>A
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

11-8737375-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737375
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737375
    reference: chr 11
allele count: 2
allele frequency: 1.764633220985018e-5
allele num: 113338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000530559
  gene symbol: ST5
  hgvsc: ENST00000530559.1:n.3C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-30C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-156C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-10C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-10C>A
  variant of: http://identifiers.org/hgnc/11350
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

11-8737377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737377
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737377
    reference: chr 11
allele count: 1
allele frequency: 8.855983988380948e-6
allele num: 112918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000530559
  gene symbol: ST5
  hgvsc: ENST00000530559.1:n.1C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-158C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-32C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-12C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-12C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

11-8737379-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737379
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737379
    reference: chr 11
allele count: 2
allele frequency: 1.787278154099122e-5
allele num: 111902
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-160C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-34C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-14C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-14C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-8737383-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737383
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737383
    reference: chr 11
allele count: 16
allele frequency: 1.433691756272401e-4
allele num: 111600
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-38T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-18T>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-164T>G
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 34640
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ

11-8737384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737384
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737384
    reference: chr 11
allele count: 4
allele frequency: 3.593761230503845e-5
allele num: 111304
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-39G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-165G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-19G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-19G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

11-8737385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737385
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737385
    reference: chr 11
allele count: 18
allele frequency: 1.62607501626075e-4
allele num: 110696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-166C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-40C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-20C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-20C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-8737387-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737387
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737387
    reference: chr 11
allele count: 1
allele frequency: 9.075068970524176e-6
allele num: 110192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-42C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-168C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-22C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-22C>G
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

11-8737388-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737388
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737388
    reference: chr 11
allele count: 2
allele frequency: 1.817851299763679e-5
allele num: 110020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-169G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-43G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-23G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-23G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

11-8737389-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737389
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737389
    reference: chr 11
allele count: 360
allele frequency: 3.277017186134576e-3
allele num: 109856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-44C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-170C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-24C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-24C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 32546
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 6
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

11-8737391-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737391
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737390
    reference: chr 11
allele count: 1
allele frequency: 9.150302875025163e-6
allele num: 109286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-173delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-47delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-27delT
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-27delT
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: GA
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-8737392-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737392
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737392
    reference: chr 11
allele count: 1
allele frequency: 9.163886954290533e-6
allele num: 109124
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-173T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-27T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-47T>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-27T>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

11-8737417-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8737417
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8737417
    reference: chr 11
allele count: 1
allele frequency: 9.564618563011706e-6
allele num: 104552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.370-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.370-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.46-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.370-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1630-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.370-72G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.46-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.46-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1630-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.97-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.370-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.460-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.46-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1630-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.46-52G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.564-198G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.169-52G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum

11-8739238-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739238
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739238
    reference: chr 11
allele count: 1
allele frequency: 9.011282125220776e-6
allele num: 110972
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+50G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+50G>C
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

11-8739242-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739242
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739242
    reference: chr 11
allele count: 5
allele frequency: 4.50507271187357e-5
allele num: 110986
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+46C>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+46C>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

11-8739246-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739246
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739246
    reference: chr 11
allele count: 1
allele frequency: 9.010145423747139e-6
allele num: 110986
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+42G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+42G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

11-8739252-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739252
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739252
    reference: chr 11
allele count: 14
allele frequency: 1.260352898811667e-4
allele num: 111080
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+36G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+36G>C
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/11-8739252-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739252
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739252
    reference: chr 11
allele count: 1
allele frequency: 9.002520705797624e-6
allele num: 111080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+36G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+36G>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

11-8739252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739252
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739252
    reference: chr 11
allele count: 21
allele frequency: 1.890529348217501e-4
allele num: 111080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+36G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+36G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14566
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5829
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

11-8739253-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739253
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739253
    reference: chr 11
allele count: 1
allele frequency: 8.996365468350786e-6
allele num: 111156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+35C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+35C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

11-8739254-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739254
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739254
    reference: chr 11
allele count: 1
allele frequency: 8.993938085730218e-6
allele num: 111186
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+34G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+34G>C
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

11-8739262-ACAGGCCGATGT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739262
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739251
    reference: chr 11
allele count: 1
allele frequency: 8.973760723644065e-6
allele num: 111436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: ACAGGCCGATGT
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

11-8739263-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739263
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739263
    reference: chr 11
allele count: 1
allele frequency: 8.972311446874944e-6
allele num: 111454
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+25G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+25G>C
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

11-8739263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739263
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739263
    reference: chr 11
allele count: 2
allele frequency: 1.794462289374989e-5
allele num: 111454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+25G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+25G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-8739268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739268
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739268
    reference: chr 11
allele count: 10
allele frequency: 8.951750067138126e-5
allele num: 111710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+20G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+20G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14678
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-8739269-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739269
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739269
    reference: chr 11
allele count: 2
allele frequency: 1.788460850591981e-5
allele num: 111828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+19C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+19C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-8739274-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739274
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739274
    reference: chr 11
allele count: 1
allele frequency: 8.923313047668338e-6
allele num: 112066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+14G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+14G>C
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14684
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

11-8739281-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739281
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739281
    reference: chr 11
allele count: 1
allele frequency: 8.865405414989627e-6
allele num: 112798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.45+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.369+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.459+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1629+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.369+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.45+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.369+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.168+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.96+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.369+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1629+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.45+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.45+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.563+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.45+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.369+7C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1629+7C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14707
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1629+7C>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

11-8739291-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739291
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739291
    reference: chr 11
allele count: 5
allele frequency: 4.388659703326604e-5
allele num: 113930
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.366A>C
  hgvsp: ENST00000526757.1:c.366A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1626A>C
  hgvsp: ENST00000534127.1:c.1626A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.366A>C
  hgvsp: ENST00000530438.1:c.366A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1626A>C
  hgvsp: ENST00000313726.6:c.1626A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.42A>C
  hgvsp: ENST00000530991.1:c.42A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.165A>C
  hgvsp: ENST00000526099.1:c.165A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.366A>C
  hgvsp: ENST00000527510.1:c.366A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.93A>C
  hgvsp: ENST00000531060.1:c.93A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1626A>C
  hgvsp: ENST00000357665.1:c.1626A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.42A>C
  hgvsp: ENST00000533020.1:c.42A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.560A>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.42A>C
  hgvsp: ENST00000526057.1:c.42A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.42A>C
  hgvsp: ENST00000530593.1:c.42A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.42A>C
  hgvsp: ENST00000528527.1:c.42A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.456A>C
  hgvsp: ENST00000532734.1:c.456A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.366A>C
  hgvsp: ENST00000528196.1:c.366A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.366A>C
  hgvsp: ENST00000530580.1:c.366A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr542Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

11-8739296-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739296
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739296
    reference: chr 11
allele count: 1
allele frequency: 8.722654478210808e-6
allele num: 114644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.451C>T
  hgvsp: ENSP00000433793.1:p.Pro151Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.160C>T
  hgvsp: ENSP00000436808.1:p.Pro54Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.37C>T
  hgvsp: ENSP00000433588.1:p.Pro13Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.361C>T
  hgvsp: ENSP00000431564.1:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1621C>T
  hgvsp: ENSP00000319678.6:p.Pro541Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.37C>T
  hgvsp: ENSP00000431580.1:p.Pro13Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1621C>T
  hgvsp: ENSP00000350294.1:p.Pro541Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.555C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.37C>T
  hgvsp: ENSP00000437096.1:p.Pro13Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1621C>T
  hgvsp: ENSP00000433528.1:p.Pro541Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.88C>T
  hgvsp: ENSP00000433858.1:p.Pro30Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.361C>T
  hgvsp: ENSP00000435097.1:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.361C>T
  hgvsp: ENSP00000434701.1:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.37C>T
  hgvsp: ENSP00000437006.1:p.Pro13Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.361C>T
  hgvsp: ENSP00000432521.1:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.361C>T
  hgvsp: ENSP00000436802.1:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.37C>T
  hgvsp: ENSP00000432887.1:p.Pro13Ser
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19058
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro541Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

11-8739297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739297
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739297
    reference: chr 11
allele count: 53
allele frequency: 4.620830354496155e-4
allele num: 114698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.36G>A
  hgvsp: ENST00000530991.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.36G>A
  hgvsp: ENST00000530593.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.554G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.450G>A
  hgvsp: ENST00000532734.1:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1620G>A
  hgvsp: ENST00000534127.1:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.360G>A
  hgvsp: ENST00000528196.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1620G>A
  hgvsp: ENST00000357665.1:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.360G>A
  hgvsp: ENST00000527510.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.360G>A
  hgvsp: ENST00000530438.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.36G>A
  hgvsp: ENST00000526057.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.36G>A
  hgvsp: ENST00000533020.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.36G>A
  hgvsp: ENST00000528527.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1620G>A
  hgvsp: ENST00000313726.6:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.360G>A
  hgvsp: ENST00000530580.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.87G>A
  hgvsp: ENST00000531060.1:c.87G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.360G>A
  hgvsp: ENST00000526757.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.159G>A
  hgvsp: ENST00000526099.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Pro540Pro
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

11-8739301-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739301
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739301
    reference: chr 11
allele count: 2
allele frequency: 1.724940920773464e-5
allele num: 115946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.356G>A
  hgvsp: ENSP00000436802.1:p.Ser119Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.32G>A
  hgvsp: ENSP00000432887.1:p.Ser11Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.32G>A
  hgvsp: ENSP00000437006.1:p.Ser11Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.550G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1616G>A
  hgvsp: ENSP00000350294.1:p.Ser539Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.356G>A
  hgvsp: ENSP00000435097.1:p.Ser119Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.32G>A
  hgvsp: ENSP00000431580.1:p.Ser11Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1616G>A
  hgvsp: ENSP00000433528.1:p.Ser539Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.32G>A
  hgvsp: ENSP00000433588.1:p.Ser11Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.83G>A
  hgvsp: ENSP00000433858.1:p.Ser28Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.356G>A
  hgvsp: ENSP00000434701.1:p.Ser119Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.32G>A
  hgvsp: ENSP00000437096.1:p.Ser11Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.446G>A
  hgvsp: ENSP00000433793.1:p.Ser149Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1616G>A
  hgvsp: ENSP00000319678.6:p.Ser539Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.155G>A
  hgvsp: ENSP00000436808.1:p.Ser52Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.356G>A
  hgvsp: ENSP00000432521.1:p.Ser119Asn
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.356G>A
  hgvsp: ENSP00000431564.1:p.Ser119Asn
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser539Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-8739303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739303
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739303
    reference: chr 11
allele count: 2
allele frequency: 1.714471856944468e-5
allele num: 116654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.30C>T
  hgvsp: ENST00000526057.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.354C>T
  hgvsp: ENST00000527510.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.354C>T
  hgvsp: ENST00000530580.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1614C>T
  hgvsp: ENST00000357665.1:c.1614C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.81C>T
  hgvsp: ENST00000531060.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.30C>T
  hgvsp: ENST00000530991.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.30C>T
  hgvsp: ENST00000533020.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.30C>T
  hgvsp: ENST00000528527.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.548C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.153C>T
  hgvsp: ENST00000526099.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.354C>T
  hgvsp: ENST00000528196.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1614C>T
  hgvsp: ENST00000534127.1:c.1614C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.354C>T
  hgvsp: ENST00000530438.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.30C>T
  hgvsp: ENST00000530593.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.354C>T
  hgvsp: ENST00000526757.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.444C>T
  hgvsp: ENST00000532734.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1614C>T
  hgvsp: ENST00000313726.6:c.1614C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14769
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn538Asn
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-8739305-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739305
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739305
    reference: chr 11
allele count: 1
allele frequency: 8.546716351577724e-6
allele num: 117004
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.151A>G
  hgvsp: ENSP00000436808.1:p.Asn51Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.352A>G
  hgvsp: ENSP00000434701.1:p.Asn118Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.352A>G
  hgvsp: ENSP00000436802.1:p.Asn118Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.28A>G
  hgvsp: ENSP00000431580.1:p.Asn10Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1612A>G
  hgvsp: ENSP00000319678.6:p.Asn538Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.546A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.352A>G
  hgvsp: ENSP00000435097.1:p.Asn118Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1612A>G
  hgvsp: ENSP00000350294.1:p.Asn538Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.79A>G
  hgvsp: ENSP00000433858.1:p.Asn27Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.28A>G
  hgvsp: ENSP00000432887.1:p.Asn10Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.352A>G
  hgvsp: ENSP00000432521.1:p.Asn118Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.28A>G
  hgvsp: ENSP00000433588.1:p.Asn10Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.28A>G
  hgvsp: ENSP00000437096.1:p.Asn10Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1612A>G
  hgvsp: ENSP00000433528.1:p.Asn538Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.28A>G
  hgvsp: ENSP00000437006.1:p.Asn10Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.352A>G
  hgvsp: ENSP00000431564.1:p.Asn118Asp
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.442A>G
  hgvsp: ENSP00000433793.1:p.Asn148Asp
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn538Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ

11-8739321-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739321
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739321
    reference: chr 11
allele count: 2
allele frequency: 1.671067143477825e-5
allele num: 119684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.12T>C
  hgvsp: ENST00000530991.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1596T>C
  hgvsp: ENST00000357665.1:c.1596T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.530T>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.336T>C
  hgvsp: ENST00000528196.1:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.426T>C
  hgvsp: ENST00000532734.1:c.426T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.336T>C
  hgvsp: ENST00000526757.1:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.336T>C
  hgvsp: ENST00000527510.1:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.12T>C
  hgvsp: ENST00000533020.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.12T>C
  hgvsp: ENST00000528527.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.336T>C
  hgvsp: ENST00000530438.1:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.12T>C
  hgvsp: ENST00000530593.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.63T>C
  hgvsp: ENST00000531060.1:c.63T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.135T>C
  hgvsp: ENST00000526099.1:c.135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1596T>C
  hgvsp: ENST00000534127.1:c.1596T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.336T>C
  hgvsp: ENST00000530580.1:c.336T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1596T>C
  hgvsp: ENST00000313726.6:c.1596T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.12T>C
  hgvsp: ENST00000526057.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro532Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

11-8739326-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739326
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739326
    reference: chr 11
allele count: 1
allele frequency: 8.320298199487469e-6
allele num: 120188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.331A>T
  hgvsp: ENSP00000431564.1:p.Ser111Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.7A>T
  hgvsp: ENSP00000433588.1:p.Ser3Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.525A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.7A>T
  hgvsp: ENSP00000437096.1:p.Ser3Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.331A>T
  hgvsp: ENSP00000434701.1:p.Ser111Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.421A>T
  hgvsp: ENSP00000433793.1:p.Ser141Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1591A>T
  hgvsp: ENSP00000433528.1:p.Ser531Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1591A>T
  hgvsp: ENSP00000350294.1:p.Ser531Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.7A>T
  hgvsp: ENSP00000437006.1:p.Ser3Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.331A>T
  hgvsp: ENSP00000435097.1:p.Ser111Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.58A>T
  hgvsp: ENSP00000433858.1:p.Ser20Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1591A>T
  hgvsp: ENSP00000319678.6:p.Ser531Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.7A>T
  hgvsp: ENSP00000431580.1:p.Ser3Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.331A>T
  hgvsp: ENSP00000432521.1:p.Ser111Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.130A>T
  hgvsp: ENSP00000436808.1:p.Ser44Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.331A>T
  hgvsp: ENSP00000436802.1:p.Ser111Cys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.7A>T
  hgvsp: ENSP00000432887.1:p.Ser3Cys
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser531Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

11-8739331-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739331
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739331
    reference: chr 11
allele count: 1
allele frequency: 8.29324929507381e-6
allele num: 120580
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.2T>C
  hgvsp: ENSP00000433588.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1586T>C
  hgvsp: ENSP00000319678.6:p.Met529Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1586T>C
  hgvsp: ENSP00000433528.1:p.Met529Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.2T>C
  hgvsp: ENSP00000437096.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.326T>C
  hgvsp: ENSP00000431564.1:p.Met109Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.2T>C
  hgvsp: ENSP00000431580.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.125T>C
  hgvsp: ENSP00000436808.1:p.Met42Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.2T>C
  hgvsp: ENSP00000432887.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.2T>C
  hgvsp: ENSP00000437006.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.326T>C
  hgvsp: ENSP00000434701.1:p.Met109Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.326T>C
  hgvsp: ENSP00000435097.1:p.Met109Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1586T>C
  hgvsp: ENSP00000350294.1:p.Met529Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.326T>C
  hgvsp: ENSP00000432521.1:p.Met109Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.326T>C
  hgvsp: ENSP00000436802.1:p.Met109Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.53T>C
  hgvsp: ENSP00000433858.1:p.Met18Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.416T>C
  hgvsp: ENSP00000433793.1:p.Met139Thr
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.520T>C
  variant of: http://identifiers.org/hgnc/11350
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

11-8739333-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739333
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739333
    reference: chr 11
allele count: 3
allele frequency: 2.486036760196894e-5
allele num: 120674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1584G>C
  hgvsp: ENSP00000350294.1:p.Arg528Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-1G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.324G>C
  hgvsp: ENSP00000431564.1:p.Arg108Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.324G>C
  hgvsp: ENSP00000432521.1:p.Arg108Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1584G>C
  hgvsp: ENSP00000319678.6:p.Arg528Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.518G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.123G>C
  hgvsp: ENSP00000436808.1:p.Arg41Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-1G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.324G>C
  hgvsp: ENSP00000436802.1:p.Arg108Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.324G>C
  hgvsp: ENSP00000435097.1:p.Arg108Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.324G>C
  hgvsp: ENSP00000434701.1:p.Arg108Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-1G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1584G>C
  hgvsp: ENSP00000433528.1:p.Arg528Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-1G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.414G>C
  hgvsp: ENSP00000433793.1:p.Arg138Ser
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-1G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.51G>C
  hgvsp: ENSP00000433858.1:p.Arg17Ser
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15061
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg528Ser
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

11-8739334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739334
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739334
    reference: chr 11
allele count: 1
allele frequency: 8.282122210995345e-6
allele num: 120742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-2G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1583G>A
  hgvsp: ENSP00000433528.1:p.Arg528Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.122G>A
  hgvsp: ENSP00000436808.1:p.Arg41Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.413G>A
  hgvsp: ENSP00000433793.1:p.Arg138Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.323G>A
  hgvsp: ENSP00000432521.1:p.Arg108Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.323G>A
  hgvsp: ENSP00000435097.1:p.Arg108Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-2G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.517G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-2G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.323G>A
  hgvsp: ENSP00000431564.1:p.Arg108Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.323G>A
  hgvsp: ENSP00000436802.1:p.Arg108Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.323G>A
  hgvsp: ENSP00000434701.1:p.Arg108Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-2G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1583G>A
  hgvsp: ENSP00000319678.6:p.Arg528Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1583G>A
  hgvsp: ENSP00000350294.1:p.Arg528Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.50G>A
  hgvsp: ENSP00000433858.1:p.Arg17Lys
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-2G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9411
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg528Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-8739335-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739335
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739335
    reference: chr 11
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.322A>G
  hgvsp: ENSP00000435097.1:p.Arg108Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.322A>G
  hgvsp: ENSP00000431564.1:p.Arg108Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1582A>G
  hgvsp: ENSP00000319678.6:p.Arg528Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.49A>G
  hgvsp: ENSP00000433858.1:p.Arg17Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.322A>G
  hgvsp: ENSP00000432521.1:p.Arg108Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.121A>G
  hgvsp: ENSP00000436808.1:p.Arg41Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.412A>G
  hgvsp: ENSP00000433793.1:p.Arg138Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.322A>G
  hgvsp: ENSP00000436802.1:p.Arg108Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1582A>G
  hgvsp: ENSP00000433528.1:p.Arg528Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.322A>G
  hgvsp: ENSP00000434701.1:p.Arg108Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.516A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1582A>G
  hgvsp: ENSP00000350294.1:p.Arg528Gly
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20037
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg528Gly
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

11-8739336-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739336
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739336
    reference: chr 11
allele count: 1
allele frequency: 8.278831029058698e-6
allele num: 120790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1581C>T
  hgvsp: ENST00000357665.1:c.1581C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.48C>T
  hgvsp: ENST00000531060.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.120C>T
  hgvsp: ENST00000526099.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.321C>T
  hgvsp: ENST00000530580.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1581C>T
  hgvsp: ENST00000313726.6:c.1581C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.321C>T
  hgvsp: ENST00000530438.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.321C>T
  hgvsp: ENST00000528196.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.321C>T
  hgvsp: ENST00000527510.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.321C>T
  hgvsp: ENST00000526757.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.515C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.411C>T
  hgvsp: ENST00000532734.1:c.411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1581C>T
  hgvsp: ENST00000534127.1:c.1581C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His527His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/11-8739369-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739369
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739369
    reference: chr 11
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.288G>T
  hgvsp: ENSP00000432521.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1548G>T
  hgvsp: ENSP00000433528.1:p.Gln516His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.288G>T
  hgvsp: ENSP00000434701.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-37G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.378G>T
  hgvsp: ENSP00000433793.1:p.Gln126His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-37G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.288G>T
  hgvsp: ENSP00000431564.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.288G>T
  hgvsp: ENSP00000436802.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1548G>T
  hgvsp: ENSP00000350294.1:p.Gln516His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1548G>T
  hgvsp: ENSP00000319678.6:p.Gln516His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.87G>T
  hgvsp: ENSP00000436808.1:p.Gln29His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.288G>T
  hgvsp: ENSP00000435097.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.15G>T
  hgvsp: ENSP00000433858.1:p.Gln5His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.482G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.554G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-37G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-37G>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-37G>T
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln516His
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-8739369-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739369
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739369
    reference: chr 11
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1548G>C
  hgvsp: ENSP00000433528.1:p.Gln516His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.288G>C
  hgvsp: ENSP00000434701.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.288G>C
  hgvsp: ENSP00000436802.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.288G>C
  hgvsp: ENSP00000431564.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-37G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.87G>C
  hgvsp: ENSP00000436808.1:p.Gln29His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.15G>C
  hgvsp: ENSP00000433858.1:p.Gln5His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1548G>C
  hgvsp: ENSP00000350294.1:p.Gln516His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.288G>C
  hgvsp: ENSP00000435097.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.288G>C
  hgvsp: ENSP00000432521.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-37G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.378G>C
  hgvsp: ENSP00000433793.1:p.Gln126His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.482G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1548G>C
  hgvsp: ENSP00000319678.6:p.Gln516His
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-37G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-37G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.554G>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-37G>C
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln516His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

11-8739379-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739379
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739379
    reference: chr 11
allele count: 34
allele frequency: 2.803245168524504e-4
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-47G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1538G>A
  hgvsp: ENSP00000319678.6:p.Arg513Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-47G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.308G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.278G>A
  hgvsp: ENSP00000431564.1:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433858
  ensembl transcript: ENST00000531060
  gene symbol: ST5
  hgvsc: ENST00000531060.1:c.5G>A
  hgvsp: ENSP00000433858.1:p.Arg2Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.278G>A
  hgvsp: ENSP00000434701.1:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.278G>A
  hgvsp: ENSP00000436802.1:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.368G>A
  hgvsp: ENSP00000433793.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1538G>A
  hgvsp: ENSP00000433528.1:p.Arg513Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-47G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.278G>A
  hgvsp: ENSP00000432521.1:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-47G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.472G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.278G>A
  hgvsp: ENSP00000435097.1:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1538G>A
  hgvsp: ENSP00000350294.1:p.Arg513Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-47G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.77G>A
  hgvsp: ENSP00000436808.1:p.Arg26Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.544G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg513Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-8739389-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739389
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739389
    reference: chr 11
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.358A>G
  hgvsp: ENSP00000433793.1:p.Arg120Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.534A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-57A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1528A>G
  hgvsp: ENSP00000350294.1:p.Arg510Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.268A>G
  hgvsp: ENSP00000434701.1:p.Arg90Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1528A>G
  hgvsp: ENSP00000319678.6:p.Arg510Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.268A>G
  hgvsp: ENSP00000436802.1:p.Arg90Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-57A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1528A>G
  hgvsp: ENSP00000433528.1:p.Arg510Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.268A>G
  hgvsp: ENSP00000431564.1:p.Arg90Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.268A>G
  hgvsp: ENSP00000435097.1:p.Arg90Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.67A>G
  hgvsp: ENSP00000436808.1:p.Arg23Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.268A>G
  hgvsp: ENSP00000432521.1:p.Arg90Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-57A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.298A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-57A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.462A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-57A>G
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg510Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

11-8739391-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739391
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739391
    reference: chr 11
allele count: 8
allele frequency: 6.594022518586901e-5
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-59G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-59G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-59G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.532G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1526G>A
  hgvsp: ENSP00000433528.1:p.Arg509Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.356G>A
  hgvsp: ENSP00000433793.1:p.Arg119Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-59G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1526G>A
  hgvsp: ENSP00000350294.1:p.Arg509Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.296G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1526G>A
  hgvsp: ENSP00000319678.6:p.Arg509Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-59G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.65G>A
  hgvsp: ENSP00000436808.1:p.Arg22Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.460G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.266G>A
  hgvsp: ENSP00000435097.1:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.266G>A
  hgvsp: ENSP00000432521.1:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.266G>A
  hgvsp: ENSP00000436802.1:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.266G>A
  hgvsp: ENSP00000434701.1:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.266G>A
  hgvsp: ENSP00000431564.1:p.Arg89Gln
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg509Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-8739392-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739392
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739392
    reference: chr 11
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.265C>G
  hgvsp: ENSP00000432521.1:p.Arg89Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1525C>G
  hgvsp: ENSP00000350294.1:p.Arg509Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1525C>G
  hgvsp: ENSP00000433528.1:p.Arg509Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.265C>G
  hgvsp: ENSP00000434701.1:p.Arg89Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.265C>G
  hgvsp: ENSP00000435097.1:p.Arg89Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-60C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-60C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.265C>G
  hgvsp: ENSP00000431564.1:p.Arg89Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-60C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-60C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.64C>G
  hgvsp: ENSP00000436808.1:p.Arg22Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.265C>G
  hgvsp: ENSP00000436802.1:p.Arg89Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.355C>G
  hgvsp: ENSP00000433793.1:p.Arg119Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-60C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.295C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.531C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1525C>G
  hgvsp: ENSP00000319678.6:p.Arg509Gly
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.459C>G
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9397
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg509Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

11-8739395-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739395
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739395
    reference: chr 11
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1522A>C
  hgvsp: ENSP00000433528.1:p.Ser508Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-63A>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-63A>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.352A>C
  hgvsp: ENSP00000433793.1:p.Ser118Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.262A>C
  hgvsp: ENSP00000432521.1:p.Ser88Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.262A>C
  hgvsp: ENSP00000435097.1:p.Ser88Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.456A>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.61A>C
  hgvsp: ENSP00000436808.1:p.Ser21Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.262A>C
  hgvsp: ENSP00000434701.1:p.Ser88Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.528A>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.262A>C
  hgvsp: ENSP00000436802.1:p.Ser88Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.262A>C
  hgvsp: ENSP00000431564.1:p.Ser88Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.292A>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-63A>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1522A>C
  hgvsp: ENSP00000319678.6:p.Ser508Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-63A>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1522A>C
  hgvsp: ENSP00000350294.1:p.Ser508Arg
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-63A>C
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser508Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

11-8739402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739402
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739402
    reference: chr 11
allele count: 2
allele frequency: 1.648179585647652e-5
allele num: 121346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.54C>T
  hgvsp: ENST00000526099.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1515C>T
  hgvsp: ENST00000357665.1:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.255C>T
  hgvsp: ENST00000527510.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.449C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.255C>T
  hgvsp: ENST00000528196.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1515C>T
  hgvsp: ENST00000534127.1:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.255C>T
  hgvsp: ENST00000530580.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.255C>T
  hgvsp: ENST00000526757.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.521C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.255C>T
  hgvsp: ENST00000530438.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.345C>T
  hgvsp: ENST00000532734.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.285C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1515C>T
  hgvsp: ENST00000313726.6:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp505Asp
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

11-8739423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739423
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739423
    reference: chr 11
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.500G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.264G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-91G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1494G>A
  hgvsp: ENST00000534127.1:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-91G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.324G>A
  hgvsp: ENST00000532734.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.428G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1494G>A
  hgvsp: ENST00000313726.6:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.234G>A
  hgvsp: ENST00000530438.1:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-91G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.33G>A
  hgvsp: ENST00000526099.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.234G>A
  hgvsp: ENST00000528196.1:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.234G>A
  hgvsp: ENST00000526757.1:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1494G>A
  hgvsp: ENST00000357665.1:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-91G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.234G>A
  hgvsp: ENST00000530580.1:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-91G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.234G>A
  hgvsp: ENST00000527510.1:c.234G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6336
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu498Glu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

11-8739435-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739435
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739435
    reference: chr 11
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.222T>C
  hgvsp: ENST00000530580.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-103T>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435292
  ensembl transcript: ENST00000533225
  gene symbol: ST5
  hgvsc: ENST00000533225.1:c.222T>C
  hgvsp: ENST00000533225.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-103T>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.416T>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.21T>C
  hgvsp: ENST00000526099.1:c.21T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.312T>C
  hgvsp: ENST00000532734.1:c.312T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1482T>C
  hgvsp: ENST00000534127.1:c.1482T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.252T>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-103T>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.222T>C
  hgvsp: ENST00000528196.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.222T>C
  hgvsp: ENST00000527510.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.222T>C
  hgvsp: ENST00000530438.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1482T>C
  hgvsp: ENST00000313726.6:c.1482T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1482T>C
  hgvsp: ENST00000357665.1:c.1482T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436506
  ensembl transcript: ENST00000531093
  gene symbol: ST5
  hgvsc: ENST00000531093.1:c.222T>C
  hgvsp: ENST00000531093.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-103T>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.222T>C
  hgvsp: ENST00000526757.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.488T>C
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-103T>C
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp494Asp
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

11-8739436-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739436
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739436
    reference: chr 11
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.221A>T
  hgvsp: ENSP00000431564.1:p.Asp74Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-104A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-104A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435292
  ensembl transcript: ENST00000533225
  gene symbol: ST5
  hgvsc: ENST00000533225.1:c.221A>T
  hgvsp: ENSP00000435292.1:p.Asp74Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.487A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-104A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.311A>T
  hgvsp: ENSP00000433793.1:p.Asp104Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1481A>T
  hgvsp: ENSP00000350294.1:p.Asp494Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.221A>T
  hgvsp: ENSP00000432521.1:p.Asp74Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.20A>T
  hgvsp: ENSP00000436808.1:p.Asp7Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1481A>T
  hgvsp: ENSP00000433528.1:p.Asp494Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.221A>T
  hgvsp: ENSP00000434701.1:p.Asp74Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.251A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-104A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.221A>T
  hgvsp: ENSP00000436802.1:p.Asp74Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1481A>T
  hgvsp: ENSP00000319678.6:p.Asp494Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.415A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436506
  ensembl transcript: ENST00000531093
  gene symbol: ST5
  hgvsc: ENST00000531093.1:c.221A>T
  hgvsp: ENSP00000436506.1:p.Asp74Val
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-104A>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.221A>T
  hgvsp: ENSP00000435097.1:p.Asp74Val
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp494Val
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

11-8739441-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739441
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739441
    reference: chr 11
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.484-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-107-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.412-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.17-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.308-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.218-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.218-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1478-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436506
  ensembl transcript: ENST00000531093
  gene symbol: ST5
  hgvsc: ENST00000531093.1:c.218-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1478-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-107-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.248-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.218-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.218-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-107-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.218-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435292
  ensembl transcript: ENST00000533225
  gene symbol: ST5
  hgvsc: ENST00000533225.1:c.218-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-107-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1478-2A>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-109A>G
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1478-2A>G
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

11-8739443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739443
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739443
    reference: chr 11
allele count: 4
allele frequency: 3.298316209575012e-5
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.218-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436506
  ensembl transcript: ENST00000531093
  gene symbol: ST5
  hgvsc: ENST00000531093.1:c.218-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1478-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-107-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.218-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-107-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.218-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.308-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.412-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.218-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.248-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435292
  ensembl transcript: ENST00000533225
  gene symbol: ST5
  hgvsc: ENST00000533225.1:c.218-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.484-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1478-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1478-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-111G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-107-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.17-4G>A
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.218-4G>A
  variant of: http://identifiers.org/hgnc/11350
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.1478-4G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

11-8739448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739448
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739448
    reference: chr 11
allele count: 12
allele frequency: 9.895927825699725e-5
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.218-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1478-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.218-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.248-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-107-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-107-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-116C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-107-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-107-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.484-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436506
  ensembl transcript: ENST00000531093
  gene symbol: ST5
  hgvsc: ENST00000531093.1:c.218-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1478-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435292
  ensembl transcript: ENST00000533225
  gene symbol: ST5
  hgvsc: ENST00000533225.1:c.218-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.218-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.17-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1478-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.218-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.218-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.308-9C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.412-9C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-8739448-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739448
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739448
    reference: chr 11
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.218-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-107-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-107-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.248-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.218-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.17-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-107-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-116C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.218-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-107-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.218-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1478-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435292
  ensembl transcript: ENST00000533225
  gene symbol: ST5
  hgvsc: ENST00000533225.1:c.218-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.412-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1478-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436506
  ensembl transcript: ENST00000531093
  gene symbol: ST5
  hgvsc: ENST00000531093.1:c.218-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1478-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.484-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.308-9C>G
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.218-9C>G
  variant of: http://identifiers.org/hgnc/11350
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP

11-8739454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739454
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739454
    reference: chr 11
allele count: 2
allele frequency: 1.649729444371123e-5
allele num: 121232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  hgvsc: ENST00000530580.1:c.218-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  hgvsc: ENST00000532734.1:c.308-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  hgvsc: ENST00000526099.1:c.17-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  hgvsc: ENST00000534127.1:c.1478-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  hgvsc: ENST00000357665.1:c.1478-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  hgvsc: ENST00000530991.1:c.-107-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  hgvsc: ENST00000526057.1:c.-107-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  hgvsc: ENST00000527510.1:c.218-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  hgvsc: ENST00000528527.1:c.-107-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  hgvsc: ENST00000533425.1:n.412-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  hgvsc: ENST00000530438.1:c.218-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  hgvsc: ENST00000313726.6:c.1478-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  hgvsc: ENST00000533020.1:c.-122C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  hgvsc: ENST00000527870.1:n.248-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  hgvsc: ENST00000530593.1:c.-107-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  hgvsc: ENST00000526757.1:c.218-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  hgvsc: ENST00000532651.1:n.484-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  hgvsc: ENST00000528196.1:c.218-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435292
  ensembl transcript: ENST00000533225
  gene symbol: ST5
  hgvsc: ENST00000533225.1:c.218-15C>T
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436506
  ensembl transcript: ENST00000531093
  gene symbol: ST5
  hgvsc: ENST00000531093.1:c.218-15C>T
  variant of: http://identifiers.org/hgnc/11350
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

11-8739459-AGAGAAGGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8739459
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 8739450
    reference: chr 11
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000434701
  ensembl transcript: ENST00000527510
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000319678
  ensembl transcript: ENST00000313726
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433528
  ensembl transcript: ENST00000534127
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000350294
  ensembl transcript: ENST00000357665
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432887
  ensembl transcript: ENST00000530991
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000432521
  ensembl transcript: ENST00000530580
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437006
  ensembl transcript: ENST00000526057
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433588
  ensembl transcript: ENST00000533020
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000437096
  ensembl transcript: ENST00000530593
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000533425
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431580
  ensembl transcript: ENST00000528527
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000431564
  ensembl transcript: ENST00000528196
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436808
  ensembl transcript: ENST00000526099
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435292
  ensembl transcript: ENST00000533225
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000435097
  ensembl transcript: ENST00000526757
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000532651
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000433793
  ensembl transcript: ENST00000532734
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl transcript: ENST00000527870
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436802
  ensembl transcript: ENST00000530438
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166444
  ensembl protein: ENSP00000436506
  ensembl transcript: ENST00000531093
  gene symbol: ST5
  variant of: http://identifiers.org/hgnc/11350
canonical: false
consequence: 5' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14959
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: AGAGAAGGGG
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

GenotypeDepth
all individuals: 2764
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36472
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 609
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 619
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3212
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12281
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3671
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4489
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4949
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12412
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.98003992015968e-5
allele num: 10020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.111774956435151e-5
allele num: 64272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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DP
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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FS
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MQRankSum
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InbreedingCoeff
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QD
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DP
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 8.148631029986962e-5
allele num: 12272
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64148
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.345244e6

VQSLOD
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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SIO_000300: 5.957e1

MQRankSum
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SIO_000300: 4.06e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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VQSLOD
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MQRankSum
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BaseQRankSum
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DP
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FS
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
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African
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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MQRankSum
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MQ
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VQSLOD
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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European (Non-Finnish)
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allele num: 63940
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Latino
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Other
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South Asian
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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FS
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MQRankSum
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DP
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MQ
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.567889620570712e-5
allele num: 63780
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

DP
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InbreedingCoeff
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SIO_000300: 2.7e-3

ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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SIO_000300: 1.521e1

MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.085e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.79e0

MQRankSum
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SIO_000300: 2.04e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.746724890829694e-4
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-2

FS
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SIO_000300: 2.078e0

ReadPosRankSum
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SIO_000300: 2.54e0

MQRankSum
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SIO_000300: 9.84e-1

QD
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SIO_000300: 1.374e1

DP
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SIO_000300: 1.319697e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.781e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: 5.81e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9848
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 1.883239171374765e-3
allele num: 8496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63232
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.02e0

ReadPosRankSum
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SIO_000300: 3.84e-1

DP
type: SiteQuality
SIO_000300: 1.315433e6

QD
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SIO_000300: 1.311e1

BaseQRankSum
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SIO_000300: 2.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9842
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.753501400560224e-5
allele num: 11424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.168266641320533e-5
allele num: 63126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.010632546404758e-5
allele num: 11098
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.164e0

DP
type: SiteQuality
SIO_000300: 1.311447e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

BaseQRankSum
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SIO_000300: 3.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.94e-1

QD
type: SiteQuality
SIO_000300: 1.069e1

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.904581955597543e-4
allele num: 8468
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62906
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 1.015509601181684e-3
allele num: 10832
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.753155680224404e-4
allele num: 11408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -2.21e-1

VQSLOD
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

QD
type: SiteQuality
SIO_000300: 1.348e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
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Latino
type: Population
allele count: 1
allele frequency: 8.785802143735723e-5
allele num: 11382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.989e0

DP
type: SiteQuality
SIO_000300: 1.287359e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.908e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.16e-1

QD
type: SiteQuality
SIO_000300: 1.731e1

MQ
type: SiteQuality
SIO_000300: 5.9e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2156
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026272577996716e-4
allele num: 9744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596678907871627e-5
allele num: 62630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10532
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

QD
type: SiteQuality
SIO_000300: 1.503e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

DP
type: SiteQuality
SIO_000300: 1.287533e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 3
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variant carriers: 0

GenotypeDepth
all individuals: 11
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variant carriers: 5

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 3300
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variant carriers: 51

GenotypeDepth
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variant carriers: 33

GenotypeDepth
all individuals: 1988
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variant carriers: 15

GenotypeDepth
all individuals: 43
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variant carriers: 26

GenotypeDepth
all individuals: 125
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variant carriers: 41

GenotypeDepth
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variant carriers: 5

GenotypeDepth
all individuals: 4
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variant carriers: 3

GenotypeDepth
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 348

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 328
allele frequency: 3.37309749074455e-2
allele num: 9724
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.9359380499824e-3
allele num: 11364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10496
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.506265664160401e-3
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.279140417639346e-4
allele num: 62542
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.55e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.626e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

QD
type: SiteQuality
SIO_000300: 1.441e1

DP
type: SiteQuality
SIO_000300: 1.286397e6

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 7
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 3
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 436
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3868
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variant carriers: 0

GenotypeQuality
all individuals: 180
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.775171065493646e-5
allele num: 10230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62344
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.214e0

MQ
type: SiteQuality
SIO_000300: 6.107e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

DP
type: SiteQuality
SIO_000300: 1.265245e6

FS
type: SiteQuality
SIO_000300: 3.115e0

VQSLOD
type: SiteQuality
SIO_000300: -1.194e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

QD
type: SiteQuality
SIO_000300: 3.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 141
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.606012912343815e-5
allele num: 62266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.2e-3

MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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FS
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ClippingRankSum
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QD
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VQSLOD
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8038
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.096010521701008e-4
allele num: 9124
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
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MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -4.3e-3

BaseQRankSum
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ClippingRankSum
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SIO_000300: 7.47e-1

VQSLOD
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QD
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DP
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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European (Non-Finnish)
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allele num: 64118
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Latino
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Other
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Latino
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VQSLOD
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DP
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FS
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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European (Non-Finnish)
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East Asian
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European (Finnish)
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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MQ
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FS
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QD
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DP
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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East Asian
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Latino
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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African
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European (Non-Finnish)
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East Asian
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ClippingRankSum
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InbreedingCoeff
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QD
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MQ
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DP
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558069240597052e-5
allele num: 64182
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
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MQ
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DP
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MQRankSum
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SIO_000300: 4.34e-1

ReadPosRankSum
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ClippingRankSum
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SIO_000300: 4.62e-1

VQSLOD
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QD
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SIO_000300: 6.77e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64190
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele frequency: 1.070893124866138e-4
allele num: 9338
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VQSLOD
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SIO_000300: -2.689e0

MQRankSum
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MQ
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 8.468e0

DP
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SIO_000300: 1.897894e6

ReadPosRankSum
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BaseQRankSum
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SIO_000300: -3.46e-1

InbreedingCoeff
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SIO_000300: -2.3e-3

QD
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SIO_000300: 7.76e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64250
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.052188552188552e-4
allele num: 9504
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MQRankSum
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SIO_000300: -3.575e0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.327e1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.145e-1

DP
type: SiteQuality
SIO_000300: 1.905156e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.556032738928827e-5
allele num: 64266
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

VQSLOD
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SIO_000300: 1.62e0

FS
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 2.7e-3

ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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SIO_000300: -1.516e0

DP
type: SiteQuality
SIO_000300: 1.906337e6

MQRankSum
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SIO_000300: -2.54e-1

GenotypeDepth
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bin: 5.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 2.103491796381994e-4
allele num: 9508
num of homozygotes: 0

DP
type: SiteQuality
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FS
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 4.84e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 9.328938366813857e-5
allele num: 64316
num of homozygotes: 0

East Asian
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allele frequency: 3.496503496503497e-4
allele num: 8580
num of homozygotes: 0

African
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele num: 802
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.0315659170621e-4
allele num: 9694
num of homozygotes: 0

DP
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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QD
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MQ
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8582
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South Asian
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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allele num: 64338
num of homozygotes: 0

African
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FS
type: SiteQuality
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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Other
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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Latino
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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QD
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FS
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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SIO_000300: -3.45e-1

DP
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SIO_000300: 1.922211e6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

European (Non-Finnish)
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allele num: 64874
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Other
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African
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South Asian
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East Asian
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Latino
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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allele num: 8616
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Other
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South Asian
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Latino
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num of homozygotes: 0

European (Finnish)
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ClippingRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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FS
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VQSLOD
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QD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele frequency: 3.134432319479916e-3
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European (Non-Finnish)
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European (Finnish)
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Latino
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allele frequency: 8.680555555555556e-5
allele num: 11520
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African
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FS
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DP
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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QD
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MQ
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele count: 2
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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QD
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MQRankSum
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InbreedingCoeff
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FS
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MQ
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.933114247052001e-4
allele num: 10346
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FS
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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VQSLOD
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QD
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MQ
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ReadPosRankSum
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SIO_000300: 3.33e-1

BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.525646111128063e-5
allele num: 65546
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Latino
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allele frequency: 0.0e0
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InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66250
num of homozygotes: 0

Latino
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East Asian
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allele frequency: 2.312138728323699e-4
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Other
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11570
num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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South Asian
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East Asian
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African
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Other
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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DP
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QD
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FS
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MQ
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DP
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East Asian
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South Asian
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VQSLOD
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MQ
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QD
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FS
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DP
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European (Non-Finnish)
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South Asian
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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VQSLOD
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MQ
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BaseQRankSum
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QD
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FS
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DP
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.499700059988002e-5
allele num: 66680
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African
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Latino
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European (Finnish)
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South Asian
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East Asian
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Other
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FS
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QD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66688
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South Asian
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African
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Latino
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East Asian
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European (Finnish)
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num of homozygotes: 0

Other
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MQ
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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FS
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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African
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
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DP
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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East Asian
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European (Finnish)
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African
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Latino
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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FS
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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East Asian
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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DP
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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QD
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MQ
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African
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European (Finnish)
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.855e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.419e0

MQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.73e-1

DP
type: SiteQuality
SIO_000300: 2.002769e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.429e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.387e1

GenotypeDepth
all individuals: 15135
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 525
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 94
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 862
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 538
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 288
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1804
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 392
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9270
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6334
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1208
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20356
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 75
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3130
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4679
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3078
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27418
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1729
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7132
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.00121e6

QD
type: SiteQuality
SIO_000300: 1.111e1

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.79e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000166444
ensembl protein: ENSP00000431580
ensembl transcript: ENST00000528527
gene symbol: ST5
hgvsc: ENST00000528527.1:c.-107-4G>A
variant of: http://identifiers.org/hgnc/11350

GenotypeDepth
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6329
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 392
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 539
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 15140
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 526
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 9243
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20332
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3129
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 227
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 862
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 75
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 289
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1802
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1207
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4676
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11128
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27397
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7130
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.623208506703652e-4
allele num: 8652
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.42e-1

DP
type: SiteQuality
SIO_000300: 2.000731e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.379e0

QD
type: SiteQuality
SIO_000300: 1.358e1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.31e-2

FS
type: SiteQuality
SIO_000300: 1.022e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.89e-1

GenotypeDepth
all individuals: 6332
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 15104
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9183
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 334
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1802
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 525
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 20233
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 863
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1207
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 183
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 289
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 539
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3128
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3074
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27241
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11072
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7132
bin: 9.75e1
variant carriers: 12

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.799316259821268e-4
allele num: 66692
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.998275e6

FS
type: SiteQuality
SIO_000300: 1.384e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.779e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.247e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.85e-1

GenotypeDepth
all individuals: 863
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15104
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1802
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6332
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 334
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 193
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1207
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3128
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 289
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 525
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9183
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20233
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 539
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27241
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3074
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7132
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11072
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.247e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.779e0

FS
type: SiteQuality
SIO_000300: 1.384e0

DP
type: SiteQuality
SIO_000300: 1.998275e6

GenotypeDepth
all individuals: 392
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 538
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9073
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20048
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 364
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 522
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 527
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15046
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6319
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1801
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1207
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3121
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 862
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11027
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4643
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26890
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7119
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999760019198464e-5
allele num: 66672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

FS
type: SiteQuality
SIO_000300: 5.006e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.084e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
type: SiteQuality
SIO_000300: 1.993218e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.237e0

GenotypeDepth
all individuals: 19776
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 392
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8881
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 781
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1207
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 665
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1799
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 538
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 862
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3119
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 522
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3724
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7119
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 537
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26428
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 7.81e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1