14-73726226-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726226
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726226
    reference: chr 14
allele count: 4
allele frequency: 6.674899042151987e-5
allele num: 59926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1958G>A
  hgvsp: ENSP00000216658.5:p.Cys653Tyr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1877G>A
  hgvsp: ENSP00000452455.1:p.Cys626Tyr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1958G>A
  hgvsp: ENSP00000451729.1:p.Cys653Tyr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1958G>A
  hgvsp: ENSP00000370558.3:p.Cys653Tyr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1958G>A
  hgvsp: ENSP00000403403.1:p.Cys653Tyr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1958G>A
  hgvsp: ENSP00000451803.1:p.Cys653Tyr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1877G>A
  hgvsp: ENSP00000345395.5:p.Cys626Tyr
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18359
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 35029
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3469
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys626Tyr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/14-73726227-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726227
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726227
    reference: chr 14
allele count: 1
allele frequency: 1.727772210511766e-5
allele num: 57878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1959C>A
  hgvsp: ENSP00000451803.1:p.Cys653Ter
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1959C>A
  hgvsp: ENSP00000370558.3:p.Cys653Ter
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1959C>A
  hgvsp: ENSP00000403403.1:p.Cys653Ter
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1878C>A
  hgvsp: ENSP00000452455.1:p.Cys626Ter
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1959C>A
  hgvsp: ENSP00000216658.5:p.Cys653Ter
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1959C>A
  hgvsp: ENSP00000451729.1:p.Cys653Ter
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1878C>A
  hgvsp: ENSP00000345395.5:p.Cys626Ter
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18208
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25551
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys626Ter
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

14-73726263-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726263
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726263
    reference: chr 14
allele count: 1
allele frequency: 2.556629339878304e-5
allele num: 39114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+10G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+10G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+10G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+10G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+10G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+10G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+10G>C
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16334
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2712
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34894
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/14-73726265-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726265
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726265
    reference: chr 14
allele count: 1
allele frequency: 2.597267674406524e-5
allele num: 38502
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+12A>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+12A>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+12A>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+12A>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+12A>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+12A>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+12A>C
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16066
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28097
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12685
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2575
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

14-73726268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726268
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726268
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 37000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+15C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+15C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+15C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+15C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+15C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+15C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+15C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27853
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33460
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13582
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

14-73726271-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726271
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726271
    reference: chr 14
allele count: 7
allele frequency: 1.962213376688905e-4
allele num: 35674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+18G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+18G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+18G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+18G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+18G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+18G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+18G>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15177
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13942
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27528
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32302
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14589
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

14-73726272-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726272
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726272
    reference: chr 14
allele count: 1431
allele frequency: 4.138948342685255e-2
allele num: 34574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+19T>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+19T>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+19T>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+19T>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+19T>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+19T>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+19T>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 2.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14880
  bin: 1.25e1
  variant carriers: 982
genotype depth: GenotypeDepth
  all individuals: 27179
  bin: 7.5e0
  variant carriers: 1009
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.75e1
  variant carriers: 270
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14548
  bin: 2.5e0
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 1.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 2.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 7.75e1
  variant carriers: 134
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 6.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 3.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 9.75e1
  variant carriers: 1183
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.25e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 97
num of homozygotes: 60
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

14-73726277-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726277
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726277
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 30944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+24C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+24C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+24C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+24C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+24C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+24C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+24C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16764
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26668
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28904
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3286
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/14-73726279-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726279
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726279
    reference: chr 14
allele count: 2
allele frequency: 6.928566479595372e-5
allele num: 28866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+26C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+26C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+26C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+26C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+26C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+26C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+26C>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26444
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12771
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18600
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3809
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

14-73726280-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726280
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726280
    reference: chr 14
allele count: 2
allele frequency: 6.933370311308327e-5
allele num: 28846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+27C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+27C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+27C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+27C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+27C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+27C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+27C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17810
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12684
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

14-73726282-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726282
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726282
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 27424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+29C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+29C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+29C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+29C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+29C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+29C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+29C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 26508
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12096
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2060
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3410
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19513
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

14-73726286-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726286
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726286
    reference: chr 14
allele count: 1
allele frequency: 4.041710451863228e-5
allele num: 24742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+33C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+33C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+33C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+33C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+33C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+33C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+33C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10888
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4813
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23351
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-73726287-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726287
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726287
    reference: chr 14
allele count: 4
allele frequency: 1.722652885443583e-4
allele num: 23220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+34G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+34G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+34G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+34G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+34G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+34G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+34G>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10284
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5238
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21736
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

14-73726288-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73726288
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73726288
    reference: chr 14
allele count: 28
allele frequency: 1.192402691423218e-3
allele num: 23482
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1985+35T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1985+35T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1904+35T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1985+35T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1985+35T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1904+35T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1985+35T>C
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19802
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26919
  bin: 7.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10210
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21564
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5215
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

14-73727371-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727371
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727371
    reference: chr 14
allele count: 2
allele frequency: 1.847677469420938e-5
allele num: 108244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-46C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-46C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-46C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-46C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-46C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-46C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-46C>G
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9725
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3465
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2871
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

14-73727371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727371
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727371
    reference: chr 14
allele count: 4
allele frequency: 3.695354938841876e-5
allele num: 108244
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-46C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-46C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-46C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-46C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-46C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-46C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-46C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2871
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19321
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

14-73727372-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727372
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727372
    reference: chr 14
allele count: 2
allele frequency: 1.847267890789522e-5
allele num: 108268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-45G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-45G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-45G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-45G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-45G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-45G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-45G>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9718
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4041
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3464
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5679
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

14-73727372-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727372
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727372
    reference: chr 14
allele count: 5
allele frequency: 4.618169726973806e-5
allele num: 108268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-45G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-45G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-45G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-45G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-45G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-45G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-45G>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5679
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3464
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-73727378-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727378
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727378
    reference: chr 14
allele count: 558
allele frequency: 5.153020704430859e-3
allele num: 108286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-39G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-39G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-39G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-39G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-39G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-39G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-39G>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 6.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 3.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 9.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 4.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7388
  bin: 3.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 6.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 11241
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 5.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 3090
  bin: 5.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 2845
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4024
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 14
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-73727379-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727379
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727379
    reference: chr 14
allele count: 1
allele frequency: 9.233610341643583e-6
allele num: 108300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-38C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-38C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-38C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-38C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-38C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-38C>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-38C>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11681
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5700
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

14-73727396-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727396
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727396
    reference: chr 14
allele count: 2
allele frequency: 1.843012219171013e-5
allele num: 108518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-21G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-21G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-21G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-21G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-21G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-21G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-21G>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19104
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4051
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

14-73727397-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727397
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727397
    reference: chr 14
allele count: 1
allele frequency: 9.212684023363366e-6
allele num: 108546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-20G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-20G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-20G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-20G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-20G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-20G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-20G>C
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4052
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3259
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

14-73727398-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727398
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727396
    reference: chr 14
allele count: 2
allele frequency: 1.842502855879427e-5
allele num: 108548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-14_1905-13delTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-14_1986-13delTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-14_1905-13delTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-14_1986-13delTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-14_1986-13delTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-14_1986-13delTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-14_1986-13delTG
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5791
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3416
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: CTG
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

14-73727406-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727406
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727406
    reference: chr 14
allele count: 1
allele frequency: 9.205051732390736e-6
allele num: 108636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-11T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-11T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-11T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-11T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-11T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-11T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-11T>C
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19102
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

14-73727409-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727409
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727409
    reference: chr 14
allele count: 4
allele frequency: 3.681681792242697e-5
allele num: 108646
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-8C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-8C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-8C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-8C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-8C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-8C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-8C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12731
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1905-8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

14-73727410-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727410
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727410
    reference: chr 14
allele count: 1
allele frequency: 9.202849202112974e-6
allele num: 108662
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-7T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-7T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-7T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-7T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-7T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-7T>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-7T>C
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1905-7T>C
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

14-73727411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727411
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727411
    reference: chr 14
allele count: 1
allele frequency: 9.203018590097552e-6
allele num: 108660
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1905-6G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1986-6G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1986-6G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1986-6G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1986-6G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1986-6G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1905-6G>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2873
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3259
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1905-6G>A
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

14-73727420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727420
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727420
    reference: chr 14
allele count: 10
allele frequency: 9.198616528074178e-5
allele num: 108712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1989C>T
  hgvsp: ENST00000381166.3:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1989C>T
  hgvsp: ENST00000427855.1:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1989C>T
  hgvsp: ENST00000554301.1:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1908C>T
  hgvsp: ENST00000555123.1:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1989C>T
  hgvsp: ENST00000555445.1:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1989C>T
  hgvsp: ENST00000216658.5:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1908C>T
  hgvsp: ENST00000340738.5:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3448
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr636Tyr
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

14-73727429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727429
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727429
    reference: chr 14
allele count: 1
allele frequency: 9.197432076964111e-6
allele num: 108726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.1998C>T
  hgvsp: ENST00000554301.1:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.1998C>T
  hgvsp: ENST00000427855.1:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1917C>T
  hgvsp: ENST00000555123.1:c.1917C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.1998C>T
  hgvsp: ENST00000216658.5:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.1998C>T
  hgvsp: ENST00000381166.3:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.1998C>T
  hgvsp: ENST00000555445.1:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1917C>T
  hgvsp: ENST00000340738.5:c.1917C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3245
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4018
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2096
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys639Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

14-73727435-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727435
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727433
    reference: chr 14
allele count: 1
allele frequency: 9.19607879200309e-6
allele num: 108742
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1924_1925delAG
  hgvsp: ENSP00000345395.5:p.Arg642GlyfsTer5
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2005_2006delAG
  hgvsp: ENSP00000403403.1:p.Arg669GlyfsTer5
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2005_2006delAG
  hgvsp: ENSP00000451729.1:p.Arg669GlyfsTer5
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2005_2006delAG
  hgvsp: ENSP00000451803.1:p.Arg669GlyfsTer5
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2005_2006delAG
  hgvsp: ENSP00000370558.3:p.Arg669GlyfsTer5
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1924_1925delAG
  hgvsp: ENSP00000452455.1:p.Arg642GlyfsTer5
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2005_2006delAG
  hgvsp: ENSP00000216658.5:p.Arg669GlyfsTer5
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12664
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg642GlyfsTer5
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: CAG
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

14-73727439-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727439
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727439
    reference: chr 14
allele count: 2
allele frequency: 1.839215758400618e-5
allele num: 108742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1927G>T
  hgvsp: ENSP00000452455.1:p.Val643Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2008G>T
  hgvsp: ENSP00000403403.1:p.Val670Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2008G>T
  hgvsp: ENSP00000451803.1:p.Val670Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2008G>T
  hgvsp: ENSP00000451729.1:p.Val670Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2008G>T
  hgvsp: ENSP00000216658.5:p.Val670Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1927G>T
  hgvsp: ENSP00000345395.5:p.Val643Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2008G>T
  hgvsp: ENSP00000370558.3:p.Val670Leu
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12412
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3221
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val643Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ

14-73727447-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727447
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727447
    reference: chr 14
allele count: 7
allele frequency: 6.436899988965315e-5
allele num: 108748
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1935C>T
  hgvsp: ENST00000340738.5:c.1935C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2016C>T
  hgvsp: ENST00000554301.1:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1935C>T
  hgvsp: ENST00000555123.1:c.1935C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2016C>T
  hgvsp: ENST00000381166.3:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2016C>T
  hgvsp: ENST00000555445.1:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2016C>T
  hgvsp: ENST00000427855.1:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2016C>T
  hgvsp: ENST00000216658.5:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19072
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 12047
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val645Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

14-73727448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727448
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727448
    reference: chr 14
allele count: 200
allele frequency: 1.839080459770115e-3
allele num: 108750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2017G>A
  hgvsp: ENSP00000403403.1:p.Ala673Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2017G>A
  hgvsp: ENSP00000216658.5:p.Ala673Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2017G>A
  hgvsp: ENSP00000451803.1:p.Ala673Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2017G>A
  hgvsp: ENSP00000370558.3:p.Ala673Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2017G>A
  hgvsp: ENSP00000451729.1:p.Ala673Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1936G>A
  hgvsp: ENSP00000452455.1:p.Ala646Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1936G>A
  hgvsp: ENSP00000345395.5:p.Ala646Thr
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 11393
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 9578
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 4.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5571
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala646Thr
num of homozygotes: 2
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

14-73727450-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727450
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727450
    reference: chr 14
allele count: 1
allele frequency: 9.195233191113726e-6
allele num: 108752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2019T>G
  hgvsp: ENST00000381166.3:c.2019T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2019T>G
  hgvsp: ENST00000427855.1:c.2019T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2019T>G
  hgvsp: ENST00000555445.1:c.2019T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2019T>G
  hgvsp: ENST00000216658.5:c.2019T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1938T>G
  hgvsp: ENST00000340738.5:c.1938T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2019T>G
  hgvsp: ENST00000554301.1:c.2019T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1938T>G
  hgvsp: ENST00000555123.1:c.1938T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9533
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5979
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5606
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19031
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala646Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

14-73727465-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727465
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727465
    reference: chr 14
allele count: 4
allele frequency: 3.681410716586596e-5
allele num: 108654
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1953C>T
  hgvsp: ENST00000340738.5:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2034C>T
  hgvsp: ENST00000427855.1:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2034C>T
  hgvsp: ENST00000216658.5:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2034C>T
  hgvsp: ENST00000555445.1:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2034C>T
  hgvsp: ENST00000381166.3:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2034C>T
  hgvsp: ENST00000554301.1:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1953C>T
  hgvsp: ENST00000555123.1:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3880
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His651His
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-73727466-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727466
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727466
    reference: chr 14
allele count: 1
allele frequency: 9.205221201465471e-6
allele num: 108634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2035G>C
  hgvsp: ENSP00000451729.1:p.Ala679Pro
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2035G>C
  hgvsp: ENSP00000216658.5:p.Ala679Pro
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1954G>C
  hgvsp: ENSP00000345395.5:p.Ala652Pro
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2035G>C
  hgvsp: ENSP00000403403.1:p.Ala679Pro
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2035G>C
  hgvsp: ENSP00000451803.1:p.Ala679Pro
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1954G>C
  hgvsp: ENSP00000452455.1:p.Ala652Pro
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2035G>C
  hgvsp: ENSP00000370558.3:p.Ala679Pro
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2840
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala652Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

14-73727469-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727469
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727469
    reference: chr 14
allele count: 1
allele frequency: 9.20352679146649e-6
allele num: 108654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2038G>T
  hgvsp: ENSP00000451729.1:p.Gly680Cys
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1957G>T
  hgvsp: ENSP00000452455.1:p.Gly653Cys
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2038G>T
  hgvsp: ENSP00000370558.3:p.Gly680Cys
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2038G>T
  hgvsp: ENSP00000216658.5:p.Gly680Cys
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1957G>T
  hgvsp: ENSP00000345395.5:p.Gly653Cys
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2038G>T
  hgvsp: ENSP00000403403.1:p.Gly680Cys
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2038G>T
  hgvsp: ENSP00000451803.1:p.Gly680Cys
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18979
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly653Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ

14-73727473-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727473
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727473
    reference: chr 14
allele count: 1
allele frequency: 9.207763986593496e-6
allele num: 108604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2042G>T
  hgvsp: ENSP00000451803.1:p.Cys681Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2042G>T
  hgvsp: ENSP00000216658.5:p.Cys681Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2042G>T
  hgvsp: ENSP00000403403.1:p.Cys681Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1961G>T
  hgvsp: ENSP00000345395.5:p.Cys654Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2042G>T
  hgvsp: ENSP00000451729.1:p.Cys681Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2042G>T
  hgvsp: ENSP00000370558.3:p.Cys681Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1961G>T
  hgvsp: ENSP00000452455.1:p.Cys654Phe
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11695
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys654Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-73727482-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727482
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727482
    reference: chr 14
allele count: 70
allele frequency: 6.443061742940245e-4
allele num: 108644
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2051C>T
  hgvsp: ENSP00000451803.1:p.Ser684Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1970C>T
  hgvsp: ENSP00000345395.5:p.Ser657Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2051C>T
  hgvsp: ENSP00000451729.1:p.Ser684Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2051C>T
  hgvsp: ENSP00000216658.5:p.Ser684Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2051C>T
  hgvsp: ENSP00000370558.3:p.Ser684Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2051C>T
  hgvsp: ENSP00000403403.1:p.Ser684Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1970C>T
  hgvsp: ENSP00000452455.1:p.Ser657Leu
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10573
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5344
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7259
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 5.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 11830
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3081
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser657Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ

14-73727483-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727483
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727483
    reference: chr 14
allele count: 237
allele frequency: 2.18232044198895e-3
allele num: 108600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1971G>A
  hgvsp: ENST00000555123.1:c.1971G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2052G>A
  hgvsp: ENST00000216658.5:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2052G>A
  hgvsp: ENST00000554301.1:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2052G>A
  hgvsp: ENST00000427855.1:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2052G>A
  hgvsp: ENST00000381166.3:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2052G>A
  hgvsp: ENST00000555445.1:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1971G>A
  hgvsp: ENST00000340738.5:c.1971G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 10500
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 3.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5894
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11681
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser657Ser
num of homozygotes: 1
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

14-73727484-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727484
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727484
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 108622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1972T>C
  hgvsp: ENSP00000452455.1:p.Tyr658His
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2053T>C
  hgvsp: ENSP00000451803.1:p.Tyr685His
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2053T>C
  hgvsp: ENSP00000370558.3:p.Tyr685His
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2053T>C
  hgvsp: ENSP00000451729.1:p.Tyr685His
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2053T>C
  hgvsp: ENSP00000216658.5:p.Tyr685His
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2053T>C
  hgvsp: ENSP00000403403.1:p.Tyr685His
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1972T>C
  hgvsp: ENSP00000345395.5:p.Tyr658His
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3050
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10534
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3082
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2804
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11934
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18945
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3825
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr658His
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

14-73727498-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727498
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727498
    reference: chr 14
allele count: 1
allele frequency: 9.20929033208701e-6
allele num: 108586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2067C>T
  hgvsp: ENST00000555445.1:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2067C>T
  hgvsp: ENST00000427855.1:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2067C>T
  hgvsp: ENST00000381166.3:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1986C>T
  hgvsp: ENST00000555123.1:c.1986C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2067C>T
  hgvsp: ENST00000554301.1:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2067C>T
  hgvsp: ENST00000216658.5:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1986C>T
  hgvsp: ENST00000340738.5:c.1986C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3823
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser662Ser
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-73727501-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727501
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727501
    reference: chr 14
allele count: 1
allele frequency: 9.214551619918175e-6
allele num: 108524
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1989C>A
  hgvsp: ENST00000340738.5:c.1989C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1989C>A
  hgvsp: ENST00000555123.1:c.1989C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2070C>A
  hgvsp: ENST00000216658.5:c.2070C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2070C>A
  hgvsp: ENST00000427855.1:c.2070C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2070C>A
  hgvsp: ENST00000554301.1:c.2070C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2070C>A
  hgvsp: ENST00000381166.3:c.2070C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2070C>A
  hgvsp: ENST00000555445.1:c.2070C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18948
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10370
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr663Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

14-73727501-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727501
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727501
    reference: chr 14
allele count: 8
allele frequency: 7.37164129593454e-5
allele num: 108524
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1989C>T
  hgvsp: ENST00000340738.5:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2070C>T
  hgvsp: ENST00000427855.1:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1989C>T
  hgvsp: ENST00000555123.1:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2070C>T
  hgvsp: ENST00000554301.1:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2070C>T
  hgvsp: ENST00000216658.5:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2070C>T
  hgvsp: ENST00000555445.1:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2070C>T
  hgvsp: ENST00000381166.3:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5893
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8901
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2289
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10370
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr663Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-73727502-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727502
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727502
    reference: chr 14
allele count: 2
allele frequency: 1.842774481258984e-5
allele num: 108532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2071G>A
  hgvsp: ENSP00000451729.1:p.Gly691Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1990G>A
  hgvsp: ENSP00000345395.5:p.Gly664Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2071G>A
  hgvsp: ENSP00000403403.1:p.Gly691Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2071G>A
  hgvsp: ENSP00000451803.1:p.Gly691Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2071G>A
  hgvsp: ENSP00000216658.5:p.Gly691Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1990G>A
  hgvsp: ENSP00000452455.1:p.Gly664Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2071G>A
  hgvsp: ENSP00000370558.3:p.Gly691Arg
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3370
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18944
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Gly664Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

14-73727504-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727504
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727504
    reference: chr 14
allele count: 1
allele frequency: 9.207763986593496e-6
allele num: 108604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2073G>T
  hgvsp: ENST00000381166.3:c.2073G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2073G>T
  hgvsp: ENST00000554301.1:c.2073G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1992G>T
  hgvsp: ENST00000340738.5:c.1992G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1992G>T
  hgvsp: ENST00000555123.1:c.1992G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2073G>T
  hgvsp: ENST00000555445.1:c.2073G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2073G>T
  hgvsp: ENST00000427855.1:c.2073G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2073G>T
  hgvsp: ENST00000216658.5:c.2073G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3037
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18964
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5122
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly664Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

14-73727509-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727509
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727509
    reference: chr 14
allele count: 4291
allele frequency: 3.953672649541149e-2
allele num: 108532
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1997T>C
  hgvsp: ENSP00000345395.5:p.Met666Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1997T>C
  hgvsp: ENSP00000452455.1:p.Met666Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2078T>C
  hgvsp: ENSP00000451803.1:p.Met693Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2078T>C
  hgvsp: ENSP00000216658.5:p.Met693Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2078T>C
  hgvsp: ENSP00000403403.1:p.Met693Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2078T>C
  hgvsp: ENSP00000370558.3:p.Met693Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2078T>C
  hgvsp: ENSP00000451729.1:p.Met693Thr
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.5e0
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 5.75e1
  variant carriers: 269
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 1.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 331
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 486
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 4.75e1
  variant carriers: 429
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 7808
  bin: 3.25e1
  variant carriers: 513
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 8.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 6.25e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 1.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 3.75e1
  variant carriers: 539
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 2.75e1
  variant carriers: 422
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 2.25e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 6.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 9.75e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4880
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 7.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.75e1
  variant carriers: 4
hgvs: p.Met666Thr
num of homozygotes: 141
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-73727509-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727509
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727509
    reference: chr 14
allele count: 62596
allele frequency: 5.767515571444367e-1
allele num: 108532
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2078T>G
  hgvsp: ENSP00000403403.1:p.Met693Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1997T>G
  hgvsp: ENSP00000452455.1:p.Met666Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2078T>G
  hgvsp: ENSP00000370558.3:p.Met693Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1997T>G
  hgvsp: ENSP00000345395.5:p.Met666Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2078T>G
  hgvsp: ENSP00000451729.1:p.Met693Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2078T>G
  hgvsp: ENSP00000216658.5:p.Met693Arg
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2078T>G
  hgvsp: ENSP00000451803.1:p.Met693Arg
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 6.25e1
  variant carriers: 1782
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 1.25e1
  variant carriers: 752
genotype depth: GenotypeDepth
  all individuals: 7808
  bin: 3.25e1
  variant carriers: 5718
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 1.75e1
  variant carriers: 1598
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.5e0
  variant carriers: 467
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 5.75e1
  variant carriers: 2541
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 8.25e1
  variant carriers: 321
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 2.25e1
  variant carriers: 2868
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 5733
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 3.75e1
  variant carriers: 6074
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 459
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 751
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 517
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 6.75e1
  variant carriers: 1167
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 3508
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 9.75e1
  variant carriers: 952
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 4.75e1
  variant carriers: 4732
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 2.75e1
  variant carriers: 4634
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 177
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 2.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 7.75e1
  variant carriers: 866
genotype quality: GenotypeQuality
  all individuals: 39146
  bin: 9.75e1
  variant carriers: 37083
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.25e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 326
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 6.75e1
  variant carriers: 709
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 7.25e1
  variant carriers: 447
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.5e0
  variant carriers: 309
hgvs: p.Met666Arg
num of homozygotes: 18768
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

14-73727510-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727510
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727510
    reference: chr 14
allele count: 1
allele frequency: 9.302325581395349e-6
allele num: 107500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.1998G>A
  hgvsp: ENSP00000452455.1:p.Met666Ile
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2079G>A
  hgvsp: ENSP00000451729.1:p.Met693Ile
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2079G>A
  hgvsp: ENSP00000370558.3:p.Met693Ile
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.1998G>A
  hgvsp: ENSP00000345395.5:p.Met666Ile
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2079G>A
  hgvsp: ENSP00000451803.1:p.Met693Ile
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2079G>A
  hgvsp: ENSP00000403403.1:p.Met693Ile
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2079G>A
  hgvsp: ENSP00000216658.5:p.Met693Ile
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met666Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

14-73727515-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727515
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727515
    reference: chr 14
allele count: 1
allele frequency: 9.322618537094698e-6
allele num: 107266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2084G>C
  hgvsp: ENSP00000451729.1:p.Arg695Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2084G>C
  hgvsp: ENSP00000403403.1:p.Arg695Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2084G>C
  hgvsp: ENSP00000370558.3:p.Arg695Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2084G>C
  hgvsp: ENSP00000451803.1:p.Arg695Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2084G>C
  hgvsp: ENSP00000216658.5:p.Arg695Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2003G>C
  hgvsp: ENSP00000452455.1:p.Arg668Thr
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2003G>C
  hgvsp: ENSP00000345395.5:p.Arg668Thr
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg668Thr
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

14-73727518-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727518
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727518
    reference: chr 14
allele count: 8
allele frequency: 7.469654528478058e-5
allele num: 107100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2087C>T
  hgvsp: ENSP00000403403.1:p.Ser696Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2006C>T
  hgvsp: ENSP00000452455.1:p.Ser669Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2087C>T
  hgvsp: ENSP00000451729.1:p.Ser696Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2087C>T
  hgvsp: ENSP00000370558.3:p.Ser696Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2087C>T
  hgvsp: ENSP00000216658.5:p.Ser696Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2006C>T
  hgvsp: ENSP00000345395.5:p.Ser669Leu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2087C>T
  hgvsp: ENSP00000451803.1:p.Ser696Leu
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3516
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser669Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

14-73727520-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727520
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727520
    reference: chr 14
allele count: 1
allele frequency: 9.345794392523365e-6
allele num: 107000
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2089A>G
  hgvsp: ENSP00000370558.3:p.Arg697Gly
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2008A>G
  hgvsp: ENSP00000452455.1:p.Arg670Gly
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2089A>G
  hgvsp: ENSP00000403403.1:p.Arg697Gly
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2089A>G
  hgvsp: ENSP00000451729.1:p.Arg697Gly
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2089A>G
  hgvsp: ENSP00000451803.1:p.Arg697Gly
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2008A>G
  hgvsp: ENSP00000345395.5:p.Arg670Gly
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2089A>G
  hgvsp: ENSP00000216658.5:p.Arg697Gly
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8005
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27326
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg670Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

14-73727522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727522
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727522
    reference: chr 14
allele count: 1
allele frequency: 9.351912466099317e-6
allele num: 106930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2091G>A
  hgvsp: ENST00000427855.1:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2091G>A
  hgvsp: ENST00000381166.3:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2010G>A
  hgvsp: ENST00000340738.5:c.2010G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2010G>A
  hgvsp: ENST00000555123.1:c.2010G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2091G>A
  hgvsp: ENST00000216658.5:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2091G>A
  hgvsp: ENST00000555445.1:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2091G>A
  hgvsp: ENST00000554301.1:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7948
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3001
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3466
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2935
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg670Arg
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

14-73727524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727524
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727524
    reference: chr 14
allele count: 12
allele frequency: 1.124922661567017e-4
allele num: 106674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2093C>T
  hgvsp: ENSP00000451729.1:p.Ala698Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2012C>T
  hgvsp: ENSP00000345395.5:p.Ala671Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2093C>T
  hgvsp: ENSP00000403403.1:p.Ala698Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2093C>T
  hgvsp: ENSP00000370558.3:p.Ala698Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2093C>T
  hgvsp: ENSP00000216658.5:p.Ala698Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2012C>T
  hgvsp: ENSP00000452455.1:p.Ala671Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2093C>T
  hgvsp: ENSP00000451803.1:p.Ala698Val
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21251
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10146
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7725
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2927
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala671Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS

14-73727527-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727527
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727527
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 106468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2096T>A
  hgvsp: ENSP00000451803.1:p.Val699Glu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2096T>A
  hgvsp: ENSP00000451729.1:p.Val699Glu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2096T>A
  hgvsp: ENSP00000370558.3:p.Val699Glu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2096T>A
  hgvsp: ENSP00000216658.5:p.Val699Glu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2015T>A
  hgvsp: ENSP00000452455.1:p.Val672Glu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2096T>A
  hgvsp: ENSP00000403403.1:p.Val699Glu
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2015T>A
  hgvsp: ENSP00000345395.5:p.Val672Glu
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val672Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

14-73727530-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727530
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727530
    reference: chr 14
allele count: 2
allele frequency: 1.882636444076285e-5
allele num: 106234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2099C>T
  hgvsp: ENSP00000370558.3:p.Ala700Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2099C>T
  hgvsp: ENSP00000451803.1:p.Ala700Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2099C>T
  hgvsp: ENSP00000451729.1:p.Ala700Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2018C>T
  hgvsp: ENSP00000452455.1:p.Ala673Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2099C>T
  hgvsp: ENSP00000403403.1:p.Ala700Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2018C>T
  hgvsp: ENSP00000345395.5:p.Ala673Val
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2099C>T
  hgvsp: ENSP00000216658.5:p.Ala700Val
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26035
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7493
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala673Val
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

14-73727533-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727533
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727533
    reference: chr 14
allele count: 2
allele frequency: 1.899696048632219e-5
allele num: 105280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2102C>T
  hgvsp: ENSP00000216658.5:p.Ser701Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2102C>T
  hgvsp: ENSP00000451729.1:p.Ser701Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2021C>T
  hgvsp: ENSP00000452455.1:p.Ser674Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2021C>T
  hgvsp: ENSP00000345395.5:p.Ser674Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2102C>T
  hgvsp: ENSP00000451803.1:p.Ser701Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2102C>T
  hgvsp: ENSP00000403403.1:p.Ser701Phe
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2102C>T
  hgvsp: ENSP00000370558.3:p.Ser701Phe
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20473
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7335
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.75e1
  variant carriers: 2
hgvs: p.Ser674Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

14-73727535-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727535
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727535
    reference: chr 14
allele count: 1
allele frequency: 9.460379928857944e-6
allele num: 105704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2104A>G
  hgvsp: ENSP00000370558.3:p.Thr702Ala
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2023A>G
  hgvsp: ENSP00000345395.5:p.Thr675Ala
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2104A>G
  hgvsp: ENSP00000451803.1:p.Thr702Ala
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2104A>G
  hgvsp: ENSP00000403403.1:p.Thr702Ala
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2104A>G
  hgvsp: ENSP00000216658.5:p.Thr702Ala
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2023A>G
  hgvsp: ENSP00000452455.1:p.Thr675Ala
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2104A>G
  hgvsp: ENSP00000451729.1:p.Thr702Ala
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2873
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7365
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr675Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

14-73727538-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727538
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727538
    reference: chr 14
allele count: 1
allele frequency: 9.477235679896888e-6
allele num: 105516
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+1G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+1G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+1G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+1G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+1G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+1G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+1G>C
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 3.75e1
  variant carriers: 0
hgvs: c.2025+1G>C
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

14-73727542-GTGTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727542
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727538
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 105316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+8_2106+11delTCTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+8_2025+11delTCTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+8_2106+11delTCTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+8_2106+11delTCTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+8_2106+11delTCTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+8_2025+11delTCTG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+8_2106+11delTCTG
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10472
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24375
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1752
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 4.75e1
  variant carriers: 0
hgvs: c.2025+8_2025+11delTCTG
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: GTGTC
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

14-73727550-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727550
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727550
    reference: chr 14
allele count: 1
allele frequency: 9.560777864887088e-6
allele num: 104594
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+13C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+13C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+13C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+13C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+13C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+13C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+13C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18129
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4571
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

14-73727555-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727555
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727555
    reference: chr 14
allele count: 1
allele frequency: 9.57725975443906e-6
allele num: 104414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+18G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+18G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+18G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+18G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+18G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+18G>C
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+18G>C
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10616
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4841
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2846
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

14-73727558-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727558
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727558
    reference: chr 14
allele count: 1
allele frequency: 9.633354526713292e-6
allele num: 103806
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+21A>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+21A>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+21A>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+21A>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+21A>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+21A>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+21A>G
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2412
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/14-73727565-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727565
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727564
    reference: chr 14
allele count: 1
allele frequency: 9.648039518369867e-6
allele num: 103648
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+29delA
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+29delA
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+29delA
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+29delA
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+29delA
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+29delA
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+29delA
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15694
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3375
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CA
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

14-73727566-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727566
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727565
    reference: chr 14
allele count: 1
allele frequency: 9.656237929702587e-6
allele num: 103560
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+34delG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+34delG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+34delG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+34delG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+34delG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+34delG
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+34delG
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7620
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20311
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3372
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5810
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: AG
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

14-73727568-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727568
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727568
    reference: chr 14
allele count: 1
allele frequency: 9.65847627878226e-6
allele num: 103536
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+31G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+31G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+31G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+31G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+31G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+31G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+31G>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5448
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2227
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19552
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5752
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2913
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

14-73727570-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727570
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727570
    reference: chr 14
allele count: 5
allele frequency: 4.833065903686662e-5
allele num: 103454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+33G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+33G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+33G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+33G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+33G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+33G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+33G>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7281
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8549
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14394
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2612
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3912
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17772
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

14-73727571-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727571
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727571
    reference: chr 14
allele count: 6
allele frequency: 5.819028222286878e-5
allele num: 103110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+34G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+34G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+34G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+34G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+34G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+34G>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+34G>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13759
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3690
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

14-73727575-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727575
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727575
    reference: chr 14
allele count: 1
allele frequency: 9.719117504130625e-6
allele num: 102890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+38G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+38G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+38G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+38G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+38G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+38G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+38G>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5415
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

14-73727577-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727577
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727577
    reference: chr 14
allele count: 1
allele frequency: 9.725545116803797e-6
allele num: 102822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+40C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+40C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+40C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+40C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+40C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+40C>G
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+40C>G
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8675
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4328
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4830
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4340
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

14-73727578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727578
    reference: chr 14
allele count: 6
allele frequency: 5.858230814294083e-5
allele num: 102420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+41C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+41C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+41C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+41C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+41C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+41C>T
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+41C>T
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8928
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11401
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5299
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3064
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4419
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2007
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2846
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1668
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

14-73727579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73727579
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 73727579
    reference: chr 14
allele count: 2
allele frequency: 1.953353908661171e-5
allele num: 102388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000216658
  ensembl transcript: ENST00000216658
  gene symbol: PAPLN
  hgvsc: ENST00000216658.5:c.2106+42G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000345395
  ensembl transcript: ENST00000340738
  gene symbol: PAPLN
  hgvsc: ENST00000340738.5:c.2025+42G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000370558
  ensembl transcript: ENST00000381166
  gene symbol: PAPLN
  hgvsc: ENST00000381166.3:c.2106+42G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451729
  ensembl transcript: ENST00000555445
  gene symbol: PAPLN
  hgvsc: ENST00000555445.1:c.2106+42G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000451803
  ensembl transcript: ENST00000554301
  gene symbol: PAPLN
  hgvsc: ENST00000554301.1:c.2106+42G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000452455
  ensembl transcript: ENST00000555123
  gene symbol: PAPLN
  hgvsc: ENST00000555123.1:c.2025+42G>A
  variant of: http://identifiers.org/hgnc/19262
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100767
  ensembl protein: ENSP00000403403
  ensembl transcript: ENST00000427855
  gene symbol: PAPLN
  hgvsc: ENST00000427855.1:c.2106+42G>A
  variant of: http://identifiers.org/hgnc/19262
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 708
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1555
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4783
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 8.565310492505353e-4
allele num: 4670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33352
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

QD
type: SiteQuality
SIO_000300: 1.285e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.71e-1

FS
type: SiteQuality
SIO_000300: 8.738e0

DP
type: SiteQuality
SIO_000300: 6.90759e5

GenotypeQuality
all individuals: 3105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5006
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34253
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4470
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.093293739173472e-5
allele num: 32328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.135e-1

FS
type: SiteQuality
SIO_000300: 3.726e0

MQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.52e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 6.77854e5

QD
type: SiteQuality
SIO_000300: 6.88e0

GenotypeQuality
all individuals: 1878
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12101
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.452182442373713e-4
allele num: 4078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4172
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.166e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

QD
type: SiteQuality
SIO_000300: 1.21e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.65e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

DP
type: SiteQuality
SIO_000300: 5.2204e5

GenotypeQuality
all individuals: 101
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.50815976918222e-5
allele num: 22182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4062
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.63e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.274e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 5.1443e5

QD
type: SiteQuality
SIO_000300: 7.18e0

GenotypeQuality
all individuals: 681
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2644
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2539
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1879
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21394
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.81e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -1.665e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.04054e5

QD
type: SiteQuality
SIO_000300: 5.87e0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeQuality
all individuals: 36
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2588
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 9.75e1
variant carriers: 8

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 2.902757619738752e-4
allele num: 20670
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.691065662002153e-4
allele num: 3716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.93335e5

VQSLOD
type: SiteQuality
SIO_000300: 3.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.89e-2

FS
type: SiteQuality
SIO_000300: 9.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
all individuals: 2643
bin: 1.75e1
variant carriers: 77

GenotypeQuality
all individuals: 427
bin: 3.75e1
variant carriers: 31

GenotypeQuality
all individuals: 1381
bin: 2.5e0
variant carriers: 8

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 66

GenotypeQuality
all individuals: 14982
bin: 7.5e0
variant carriers: 35

GenotypeQuality
all individuals: 29936
bin: 2.25e1
variant carriers: 86

GenotypeQuality
all individuals: 156
bin: 8.75e1
variant carriers: 139

GenotypeQuality
all individuals: 188
bin: 8.25e1
variant carriers: 138

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 75

GenotypeQuality
all individuals: 953
bin: 6.25e1
variant carriers: 72

Latino
type: Population
allele count: 169
allele frequency: 4.699666295884316e-2
allele num: 3596
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 2.290076335877863e-2
allele num: 262
num of homozygotes: 0

East Asian
type: Population
allele count: 288
allele frequency: 1.00418410041841e-1
allele num: 2868
num of homozygotes: 8

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1514
num of homozygotes: 0

African
type: Population
allele count: 529
allele frequency: 1.850944716585025e-1
allele num: 2858
num of homozygotes: 34

South Asian
type: Population
allele count: 343
allele frequency: 1.008230452674897e-1
allele num: 3402
num of homozygotes: 18

European (Non-Finnish)
type: Population
allele count: 96
allele frequency: 4.782305469761881e-3
allele num: 20074
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.85532e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

FS
type: SiteQuality
SIO_000300: 6.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17497
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2758
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 4.58164e5

VQSLOD
type: SiteQuality
SIO_000300: -7.518e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.53e-2

MQ
type: SiteQuality
SIO_000300: 5.662e1

GenotypeQuality
all individuals: 3741
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26361
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2324
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.101722723543889e-4
allele num: 2438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.756389592447617e-5
allele num: 17372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1322
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.847e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.5053e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.517e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.76e-2

QD
type: SiteQuality
SIO_000300: 1.63e0

DP
type: SiteQuality
SIO_000300: 4.45272e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
all individuals: 47
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26815
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18712
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2440
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1324
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2974
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 1.153136531365314e-4
allele num: 17344
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -1.566e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

QD
type: SiteQuality
SIO_000300: 1.054e1

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.74e-2

DP
type: SiteQuality
SIO_000300: 4.44597e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.208e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 16596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2090
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1236
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2206
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2830
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.221e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.91e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15044
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1916
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1938
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.875968992248062e-4
allele num: 2580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.173e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.20725e5

FS
type: SiteQuality
SIO_000300: 3.979e0

VQSLOD
type: SiteQuality
SIO_000300: -1.268e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.23e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
type: Population
allele count: 1
allele frequency: 5.405405405405405e-4
allele num: 1850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.109877913429523e-3
allele num: 1802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.066139061616732e-5
allele num: 14152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1042
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.12976e5

VQSLOD
type: SiteQuality
SIO_000300: -2.588e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.47e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

QD
type: SiteQuality
SIO_000300: 3.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 31

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 452
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1808
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 1.546961325966851e-2
allele num: 1810
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.11635e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.263e1

FS
type: SiteQuality
SIO_000300: 7.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.22e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.183902190524707e-5
allele num: 62816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8998
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

QD
type: SiteQuality
SIO_000300: 1.046e1

DP
type: SiteQuality
SIO_000300: 2.113529e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.973e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.775853285787061e-5
allele num: 62816
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.002004008016032e-4
allele num: 9980
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.03e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.973e-1

DP
type: SiteQuality
SIO_000300: 2.113529e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8996
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62842
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East Asian
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allele frequency: 2.363507445048452e-4
allele num: 8462
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Latino
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Other
type: Population
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allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

FS
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.83e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19318
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variant carriers: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.956462238630215e-5
allele num: 62842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 8996
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VQSLOD
type: SiteQuality
SIO_000300: 9.83e-1

BaseQRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 3.617e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5627
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GenotypeQuality
all individuals: 2075
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Latino
type: Population
allele count: 24
allele frequency: 2.103786816269285e-3
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.111605157847932e-4
allele num: 8996
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African
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allele count: 475
allele frequency: 4.752851711026616e-2
allele num: 9994
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Other
type: Population
allele count: 1
allele frequency: 1.355013550135501e-3
allele num: 738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 57
allele frequency: 9.070944333046882e-4
allele num: 62838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5846
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.279e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

QD
type: SiteQuality
SIO_000300: 1.323e1

DP
type: SiteQuality
SIO_000300: 2.121824e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

GenotypeQuality
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GenotypeQuality
all individuals: 158
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GenotypeQuality
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GenotypeQuality
all individuals: 19107
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5842
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591140529531568e-5
allele num: 62848
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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SIO_000300: 1.223e1

ClippingRankSum
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SIO_000300: -1.21e0

BaseQRankSum
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SIO_000300: -4.098e0

FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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SIO_000300: -3.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
SIO_000300: 2.110502e6

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.970089730807577e-5
allele num: 10030
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.587553579933323e-5
allele num: 62990
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.41e-1

DP
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -2.5e-3

MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.104e1

MQRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.180916391119509e-4
allele num: 8468
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62990
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.182e0

MQRankSum
type: SiteQuality
SIO_000300: -8.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

InbreedingCoeff
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SIO_000300: -3.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.686e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

DP
type: SiteQuality
SIO_000300: 2.118558e6

QD
type: SiteQuality
SIO_000300: 1.3e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.17490554655999e-5
allele num: 62994
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

DP
type: SiteQuality
SIO_000300: 2.11885e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.403e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.586344744439862e-5
allele num: 63038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

FS
type: SiteQuality
SIO_000300: 8.378e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.015e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 1.095e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

DP
type: SiteQuality
SIO_000300: 2.120289e6

MQ
type: SiteQuality
SIO_000300: 5.92e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.753463089601964e-4
allele num: 11406
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.360160490913382e-4
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5912
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
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MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 2.120711e6

VQSLOD
type: SiteQuality
SIO_000300: 6.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.192e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.23e-1

QD
type: SiteQuality
SIO_000300: 1.134e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8474
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5926
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.586193769430874e-5
allele num: 63044
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

Latino
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allele num: 11404
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FS
type: SiteQuality
SIO_000300: 4.933e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
SIO_000300: 2.120731e6

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.586143450813691e-5
allele num: 63046
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10064
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5922
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South Asian
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allele num: 9004
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Other
type: Population
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Latino
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
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allele num: 10068
num of homozygotes: 0

South Asian
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Latino
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allele frequency: 4.384426517011575e-4
allele num: 11404
num of homozygotes: 0

European (Finnish)
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Other
type: Population
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allele frequency: 1.340482573726542e-3
allele num: 746
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.75722305033142e-5
allele num: 63062
num of homozygotes: 0

East Asian
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ClippingRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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FS
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

European (Finnish)
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Other
type: Population
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allele num: 750
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585489599188229e-5
allele num: 63072
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

QD
type: SiteQuality
SIO_000300: 1.566e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

FS
type: SiteQuality
SIO_000300: 2.637e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 2.120286e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2871
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180358829084042e-4
allele num: 8472
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.94e1

QD
type: SiteQuality
SIO_000300: 1.837e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.461e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e-1

FS
type: SiteQuality
SIO_000300: 1.087e0

DP
type: SiteQuality
SIO_000300: 2.118872e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 2093
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.360160490913382e-4
allele num: 8474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5962
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.116236e6

FS
type: SiteQuality
SIO_000300: 2.501e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.347e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: 8.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

QD
type: SiteQuality
SIO_000300: 1.057e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.024e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3197
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variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5970
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.630655910206945e-4
allele num: 11404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.170275496940684e-5
allele num: 63086
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.928514694201747e-5
allele num: 10072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.11185234600845e-4
allele num: 8994
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

FS
type: SiteQuality
SIO_000300: 2.51e0

QD
type: SiteQuality
SIO_000300: 1.322e1

DP
type: SiteQuality
SIO_000300: 2.11152e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.0e-1

GenotypeQuality
all individuals: 3403
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 198

GenotypeQuality
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GenotypeQuality
all individuals: 3942
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GenotypeQuality
all individuals: 109
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

African
type: Population
allele count: 190
allele frequency: 1.887167262614223e-2
allele num: 10068
num of homozygotes: 2

South Asian
type: Population
allele count: 1
allele frequency: 1.111111111111111e-4
allele num: 9000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.585288522511097e-5
allele num: 63080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.016312927556569e-4
allele num: 11402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

QD
type: SiteQuality
SIO_000300: 1.307e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 2.11315e6

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 5.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
all individuals: 3189
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3958
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GenotypeQuality
all individuals: 2086
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63086
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.928514694201747e-5
allele num: 10072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.958e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.332e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 1.541e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.075e0

DP
type: SiteQuality
SIO_000300: 2.108293e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -9.678e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.757072180641888e-5
allele num: 63064
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.11333778668448e-4
allele num: 8982
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.194e1

DP
type: SiteQuality
SIO_000300: 2.096507e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 1.4215e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.035e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.149999999999999e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5369
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8980
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.683501683501684e-4
allele num: 5940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63040
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.009e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.092e0

DP
type: SiteQuality
SIO_000300: 2.095476e6

VQSLOD
type: SiteQuality
SIO_000300: -3.495e-1

FS
type: SiteQuality
SIO_000300: 1.446e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.586e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5936
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 752
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.94431185361973e-5
allele num: 10056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63062
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e0

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.483e0

VQSLOD
type: SiteQuality
SIO_000300: -5.42e0

DP
type: SiteQuality
SIO_000300: 2.093945e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5309
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.954210631096954e-5
allele num: 10046
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5936
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.893e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 2.694e1

DP
type: SiteQuality
SIO_000300: 2.091671e6

VQSLOD
type: SiteQuality
SIO_000300: -1.39e0

FS
type: SiteQuality
SIO_000300: 6.623e0

MQRankSum
type: SiteQuality
SIO_000300: -1.44e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

GenotypeQuality
all individuals: 227
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3332
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5274
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3810
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18992
bin: 9.75e1
variant carriers: 71

GenotypeQuality
all individuals: 444
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 59
allele frequency: 9.357059028768991e-4
allele num: 63054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.177658142664872e-3
allele num: 5944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.983293556085919e-4
allele num: 10056
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.329787234042553e-3
allele num: 752
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 2.088224e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

QD
type: SiteQuality
SIO_000300: 1.231e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

GenotypeQuality
all individuals: 19081
bin: 9.75e1
variant carriers: 237

GenotypeQuality
all individuals: 5261
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3794
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.511852502194908e-4
allele num: 11390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

African
type: Population
allele count: 233
allele frequency: 2.31933107704559e-2
allele num: 10046
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5940
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 1.805e0

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

QD
type: SiteQuality
SIO_000300: 1.303e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.65e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 2.088825e6

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5305
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2826
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3355
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQ
type: SiteQuality
SIO_000300: 4.984e1

DP
type: SiteQuality
SIO_000300: 2.086555e6

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.158e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

QD
type: SiteQuality
SIO_000300: 1.885e1

GenotypeQuality
all individuals: 18956
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 602
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3013
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3358
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10366
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5123
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63012
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.115075825156111e-4
allele num: 8968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 2.078675e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.381e0

QD
type: SiteQuality
SIO_000300: 1.334e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

GenotypeQuality
all individuals: 2289
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3813
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5067
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588209135378947e-5
allele num: 62964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

DP
type: SiteQuality
SIO_000300: 2.078673e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

FS
type: SiteQuality
SIO_000300: 1.149e0

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

GenotypeQuality
all individuals: 18948
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 682
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3813
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5067
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.11632060727841e-4
allele num: 8958
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.181474480151229e-4
allele num: 8464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.76462740613684e-5
allele num: 62964
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.634351949420442e-4
allele num: 11388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.941e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

DP
type: SiteQuality
SIO_000300: 2.078673e6

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

FS
type: SiteQuality
SIO_000300: 1.149e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

GenotypeQuality
all individuals: 143
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10686
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2829
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5066
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.364066193853428e-4
allele num: 8460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8962
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.643e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.201e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 2.082e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.641e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

DP
type: SiteQuality
SIO_000300: 2.079304e6

GenotypeQuality
all individuals: 136
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3892
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2850
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10512
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5972
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.114827201783724e-4
allele num: 8970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63014
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.672e0

VQSLOD
type: SiteQuality
SIO_000300: 5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

DP
type: SiteQuality
SIO_000300: 2.07876e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.598e0

QD
type: SiteQuality
SIO_000300: 9.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.47e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeQuality
all individuals: 246
bin: 1.25e1
variant carriers: 17

GenotypeQuality
all individuals: 289
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1285
bin: 9.25e1
variant carriers: 15

GenotypeQuality
all individuals: 835
bin: 7.5e0
variant carriers: 23

GenotypeQuality
all individuals: 193
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2031
bin: 6.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1039
bin: 7.25e1
variant carriers: 11

GenotypeQuality
all individuals: 236
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1408
bin: 8.25e1
variant carriers: 18

GenotypeQuality
all individuals: 480
bin: 5.25e1
variant carriers: 7

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 9

GenotypeQuality
all individuals: 39146
bin: 9.75e1
variant carriers: 4070

Latino
type: Population
allele count: 229
allele frequency: 2.01655512504403e-2
allele num: 11356
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 192
allele frequency: 3.167271527548664e-2
allele num: 6062
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1999
allele frequency: 3.1783635958915e-2
allele num: 62894
num of homozygotes: 34

East Asian
type: Population
allele count: 2
allele frequency: 2.371916508538899e-4
allele num: 8432
num of homozygotes: 0

Other
type: Population
allele count: 26
allele frequency: 3.448275862068965e-2
allele num: 754
num of homozygotes: 0

South Asian
type: Population
allele count: 425
allele frequency: 4.738015607580825e-2
allele num: 8970
num of homozygotes: 12

African
type: Population
allele count: 1418
allele frequency: 1.408982511923688e-1
allele num: 10064
num of homozygotes: 89

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

DP
type: SiteQuality
SIO_000300: 2.240128e6

QD
type: SiteQuality
SIO_000300: 2.276e1

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.573e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 1408
bin: 8.25e1
variant carriers: 979

GenotypeQuality
all individuals: 289
bin: 3.75e1
variant carriers: 219

GenotypeQuality
all individuals: 4880
bin: 6.25e1
variant carriers: 559

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 177

GenotypeQuality
all individuals: 213
bin: 2.75e1
variant carriers: 125

GenotypeQuality
all individuals: 535
bin: 2.25e1
variant carriers: 163

GenotypeQuality
all individuals: 193
bin: 1.75e1
variant carriers: 167

GenotypeQuality
all individuals: 246
bin: 1.25e1
variant carriers: 209

GenotypeQuality
all individuals: 426
bin: 4.75e1
variant carriers: 341

GenotypeQuality
all individuals: 1285
bin: 9.25e1
variant carriers: 1034

GenotypeQuality
all individuals: 480
bin: 5.25e1
variant carriers: 398

GenotypeQuality
all individuals: 759
bin: 8.75e1
variant carriers: 585

Latino
type: Population
allele count: 8840
allele frequency: 7.784431137724551e-1
allele num: 11356
num of homozygotes: 3512

East Asian
type: Population
allele count: 6115
allele frequency: 7.252134724857685e-1
allele num: 8432
num of homozygotes: 2187

European (Finnish)
type: Population
allele count: 2996
allele frequency: 4.942263279445728e-1
allele num: 6062
num of homozygotes: 709

African
type: Population
allele count: 7397
allele frequency: 7.349960254372019e-1
allele num: 10064
num of homozygotes: 2724

Other
type: Population
allele count: 403
allele frequency: 5.344827586206896e-1
allele num: 754
num of homozygotes: 105

South Asian
type: Population
allele count: 5985
allele frequency: 6.672240802675585e-1
allele num: 8970
num of homozygotes: 2003

European (Non-Finnish)
type: Population
allele count: 30860
allele frequency: 4.906668362641906e-1
allele num: 62894
num of homozygotes: 7528

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.573e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

DP
type: SiteQuality
SIO_000300: 2.240128e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 2.276e1

GenotypeQuality
all individuals: 204
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2353
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3157
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2993
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27491
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8878
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.186239620403321e-4
allele num: 8430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62494
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.51e0

FS
type: SiteQuality
SIO_000300: 7.607e0

VQSLOD
type: SiteQuality
SIO_000300: 3.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.71e-1

DP
type: SiteQuality
SIO_000300: 1.584764e6

GenotypeQuality
all individuals: 2329
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3069
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 213
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.603592046183451e-5
allele num: 62360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8860
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.992e-1

FS
type: SiteQuality
SIO_000300: 8.629e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.575e0

DP
type: SiteQuality
SIO_000300: 1.574483e6

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.699e1

QD
type: SiteQuality
SIO_000300: 1.188e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

GenotypeQuality
all individuals: 460
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2951
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 8029
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.14663951120163e-4
allele num: 9820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 1.185e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

DP
type: SiteQuality
SIO_000300: 1.568697e6

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.179e1

GenotypeQuality
all individuals: 2267
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2767
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2941
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 389
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.606632177629254e-5
allele num: 62242
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.268e1

DP
type: SiteQuality
SIO_000300: 1.564188e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.43e0

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.08e-1

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2159
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27200
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.608027272142536e-5
allele num: 62188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 1.559056e6

VQSLOD
type: SiteQuality
SIO_000300: 3.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.27e-1

QD
type: SiteQuality
SIO_000300: 1.454e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.038e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.12e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 26546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3053
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 3396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8832
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.231021748050882e-3
allele num: 9748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.284e1

DP
type: SiteQuality
SIO_000300: 1.548277e6

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.241e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.453e0

GenotypeQuality
all individuals: 1141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3357
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26239
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2928
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3214
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8816
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.025e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.539629e6

GenotypeQuality
all individuals: 2849
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3357
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2920
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 499
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3314
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2086
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5616
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.387774594078319e-4
allele num: 8376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.357e0

QD
type: SiteQuality
SIO_000300: 1.924e1

MQ
type: SiteQuality
SIO_000300: 5.843e1

VQSLOD
type: SiteQuality
SIO_000300: 4.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.49e-1

DP
type: SiteQuality
SIO_000300: 1.531586e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.839587932303164e-4
allele num: 5436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61292
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8786
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.04777870913663e-4
allele num: 9544
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11156
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

FS
type: SiteQuality
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MQ
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SIO_000300: 5.895e1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -2.186e0

BaseQRankSum
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SIO_000300: -2.411e0

MQRankSum
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SIO_000300: -5.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.316e2

DP
type: SiteQuality
SIO_000300: 1.517672e6

QD
type: SiteQuality
SIO_000300: 2.15e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5512
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.138433515482696e-4
allele num: 8784
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.531e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.116e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 9.44e0

DP
type: SiteQuality
SIO_000300: 1.507864e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2006
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.377410468319559e-3
allele num: 726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8766
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.495145e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e-1

FS
type: SiteQuality
SIO_000300: 7.753e0

MQRankSum
type: SiteQuality
SIO_000300: 7.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.493e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8758
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.484136e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

QD
type: SiteQuality
SIO_000300: 1.218e1

MQ
type: SiteQuality
SIO_000300: 5.56e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5346
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.018759018759019e-5
allele num: 11088
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.657e0

QD
type: SiteQuality
SIO_000300: 1.045e1

VQSLOD
type: SiteQuality
SIO_000300: -2.836e0

MQRankSum
type: SiteQuality
SIO_000300: -1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 5.831e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.054e0

DP
type: SiteQuality
SIO_000300: 1.455179e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.641766540797899e-5
allele num: 60910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8278
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5346
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.906e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5238
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 60602
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African
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allele num: 9312
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 1.155268022181146e-4
allele num: 8656
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9274
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60512
num of homozygotes: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.138e0

InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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QD
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VQSLOD
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11004
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.65404082172748e-5
allele num: 60458
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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Other
type: Population
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allele num: 710
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European (Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

MQRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 284
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.906214258482653e-4
allele num: 5246
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

QD
type: SiteQuality
SIO_000300: 1.399e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.382557e6

VQSLOD
type: SiteQuality
SIO_000300: -9.284e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.273e0

MQ
type: SiteQuality
SIO_000300: 5.879e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.78e-1

GenotypeQuality
all individuals: 2631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5439
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2177
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5472
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.075334143377885e-4
allele num: 8230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9258
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.101e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.35e-1

QD
type: SiteQuality
SIO_000300: 9.02e0

FS
type: SiteQuality
SIO_000300: 7.25e-1

DP
type: SiteQuality
SIO_000300: 1.365242e6

VQSLOD
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 499
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2596
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 5356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4063
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.3117231294175e-4
allele num: 8206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10956
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.177e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.642e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

QD
type: SiteQuality
SIO_000300: 1.081e1

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

DP
type: SiteQuality
SIO_000300: 1.355309e6

GenotypeQuality
all individuals: 4287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2535
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2796
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2779
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4957
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.662786830728301e-5
allele num: 60140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5194
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.398e0

QD
type: SiteQuality
SIO_000300: 9.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.33319e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.449000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2501
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5390
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2793
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1323
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60078
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.089087344805053e-4
allele num: 9182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5194
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.628e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

QD
type: SiteQuality
SIO_000300: 9.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e0

MQRankSum
type: SiteQuality
SIO_000300: -1.262e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

DP
type: SiteQuality
SIO_000300: 1.323693e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.221e0

GenotypeQuality
all individuals: 2465
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13065
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4486
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2792
bin: 9.75e1
variant carriers: 7

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.670062460336017e-5
allele num: 59878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.453385672227674e-4
allele num: 8152
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.522780648191639e-4
allele num: 8516
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.507e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

DP
type: SiteQuality
SIO_000300: 1.316636e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1