12-121746251-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746251
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746251
    reference: chr 12
allele count: 1
allele frequency: 8.547300762419228e-6
allele num: 116996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.*32G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.*32G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.3074G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2511G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.*32G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1418G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.*32G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.938G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*435G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7792
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23978
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7475
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6076
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

12-121746267-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746267
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746267
    reference: chr 12
allele count: 3
allele frequency: 2.50685206230363e-5
allele num: 119672
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*419T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.*16T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2495T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.*16T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.3058T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1402T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.922T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.*16T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.*16T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

12-121746291-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746291
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746291
    reference: chr 12
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2471C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.3034C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2260C>T
  hgvsp: ENSP00000261819.3:p.His754Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1258C>T
  hgvsp: ENSP00000438754.1:p.His420Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2221C>T
  hgvsp: ENSP00000439875.1:p.His741Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1924C>T
  hgvsp: ENSP00000343787.4:p.His642Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1378C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*395C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1924C>T
  hgvsp: ENSP00000415061.2:p.His642Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.898C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6185
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His754Tyr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

12-121746298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746298
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746298
    reference: chr 12
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.3027G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1251G>A
  hgvsp: ENST00000535482.1:c.1251G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*388G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1917G>A
  hgvsp: ENST00000344395.4:c.1917G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2214G>A
  hgvsp: ENST00000541887.1:c.2214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1917G>A
  hgvsp: ENST00000441917.2:c.1917G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2253G>A
  hgvsp: ENST00000261819.3:c.2253G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1371G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.891G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2464G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu751Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD

12-121746326-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746326
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746326
    reference: chr 12
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1889A>G
  hgvsp: ENSP00000415061.2:p.Gln630Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2186A>G
  hgvsp: ENSP00000439875.1:p.Gln729Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1343A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1223A>G
  hgvsp: ENSP00000438754.1:p.Gln408Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.863A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2225A>G
  hgvsp: ENSP00000261819.3:p.Gln742Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1889A>G
  hgvsp: ENSP00000343787.4:p.Gln630Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*360A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2999A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2436A>G
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29759
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8439
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln742Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum

12-121746329-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746329
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746329
    reference: chr 12
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2996A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*357A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1886A>G
  hgvsp: ENSP00000415061.2:p.His629Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2222A>G
  hgvsp: ENSP00000261819.3:p.His741Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2433A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1886A>G
  hgvsp: ENSP00000343787.4:p.His629Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1220A>G
  hgvsp: ENSP00000438754.1:p.His407Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.860A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2183A>G
  hgvsp: ENSP00000439875.1:p.His728Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1340A>G
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His741Arg
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

12-121746330-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746330
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746330
    reference: chr 12
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1885C>T
  hgvsp: ENSP00000415061.2:p.His629Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1339C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1219C>T
  hgvsp: ENSP00000438754.1:p.His407Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2182C>T
  hgvsp: ENSP00000439875.1:p.His728Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1885C>T
  hgvsp: ENSP00000343787.4:p.His629Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2432C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2221C>T
  hgvsp: ENSP00000261819.3:p.His741Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.859C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2995C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*356C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29744
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His741Tyr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum

12-121746337-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746337
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746337
    reference: chr 12
allele count: 1121
allele frequency: 9.238503378935224e-3
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1212G>A
  hgvsp: ENST00000535482.1:c.1212G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2988G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*349G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1332G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2214G>A
  hgvsp: ENST00000261819.3:c.2214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1878G>A
  hgvsp: ENST00000344395.4:c.1878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2425G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.852G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2175G>A
  hgvsp: ENST00000541887.1:c.2175G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1878G>A
  hgvsp: ENST00000441917.2:c.1878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27430
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 8983
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15076
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 9.75e1
  variant carriers: 723
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg738Arg
num of homozygotes: 18
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

12-121746338-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746338
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746338
    reference: chr 12
allele count: 6
allele frequency: 4.94486475794887e-5
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1331G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2174G>A
  hgvsp: ENSP00000439875.1:p.Arg725Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*348G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2987G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2213G>A
  hgvsp: ENSP00000261819.3:p.Arg738Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1211G>A
  hgvsp: ENSP00000438754.1:p.Arg404Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1877G>A
  hgvsp: ENSP00000415061.2:p.Arg626Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1877G>A
  hgvsp: ENSP00000343787.4:p.Arg626Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2424G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.851G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1630
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg738Gln
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

12-121746339-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746339
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746339
    reference: chr 12
allele count: 2
allele frequency: 1.648206751054852e-5
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2173C>T
  hgvsp: ENSP00000439875.1:p.Arg725Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1210C>T
  hgvsp: ENSP00000438754.1:p.Arg404Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1876C>T
  hgvsp: ENSP00000343787.4:p.Arg626Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2212C>T
  hgvsp: ENSP00000261819.3:p.Arg738Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2423C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1876C>T
  hgvsp: ENSP00000415061.2:p.Arg626Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.850C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2986C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*347C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1330C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg738Trp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

12-121746339-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746339
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746339
    reference: chr 12
allele count: 2
allele frequency: 1.648206751054852e-5
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1210C>A
  hgvsp: ENST00000535482.1:c.1210C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2212C>A
  hgvsp: ENST00000261819.3:c.2212C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.850C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2986C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1330C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1876C>A
  hgvsp: ENST00000441917.2:c.1876C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1876C>A
  hgvsp: ENST00000344395.4:c.1876C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2423C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2173C>A
  hgvsp: ENST00000541887.1:c.2173C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*347C>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg738Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

12-121746349-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746349
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746349
    reference: chr 12
allele count: 3
allele frequency: 2.471902705909495e-5
allele num: 121364
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2202G>A
  hgvsp: ENST00000261819.3:c.2202G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1200G>A
  hgvsp: ENST00000535482.1:c.1200G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1866G>A
  hgvsp: ENST00000344395.4:c.1866G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1866G>A
  hgvsp: ENST00000441917.2:c.1866G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*337G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1320G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2163G>A
  hgvsp: ENST00000541887.1:c.2163G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2976G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2413G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.840G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3745
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala734Ala
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum

12-121746350-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746350
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746350
    reference: chr 12
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1865C>T
  hgvsp: ENSP00000415061.2:p.Ala622Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2201C>T
  hgvsp: ENSP00000261819.3:p.Ala734Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1865C>T
  hgvsp: ENSP00000343787.4:p.Ala622Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*336C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.839C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2162C>T
  hgvsp: ENSP00000439875.1:p.Ala721Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2975C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1199C>T
  hgvsp: ENSP00000438754.1:p.Ala400Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2412C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1319C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3744
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala734Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

12-121746354-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746354
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746354
    reference: chr 12
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1315T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2197T>C
  hgvsp: ENSP00000261819.3:p.Cys733Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1861T>C
  hgvsp: ENSP00000343787.4:p.Cys621Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1195T>C
  hgvsp: ENSP00000438754.1:p.Cys399Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1861T>C
  hgvsp: ENSP00000415061.2:p.Cys621Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2971T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*332T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.835T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2158T>C
  hgvsp: ENSP00000439875.1:p.Cys720Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2408T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys733Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

12-121746355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746355
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746355
    reference: chr 12
allele count: 7
allele frequency: 5.767392808885081e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1860G>A
  hgvsp: ENST00000441917.2:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2407G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.834G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1194G>A
  hgvsp: ENST00000535482.1:c.1194G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1860G>A
  hgvsp: ENST00000344395.4:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1314G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2196G>A
  hgvsp: ENST00000261819.3:c.2196G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*331G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2157G>A
  hgvsp: ENST00000541887.1:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2970G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1630
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg732Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

12-121746356-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746356
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746356
    reference: chr 12
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2195G>C
  hgvsp: ENSP00000261819.3:p.Arg732Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1859G>C
  hgvsp: ENSP00000343787.4:p.Arg620Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1313G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*330G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1193G>C
  hgvsp: ENSP00000438754.1:p.Arg398Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1859G>C
  hgvsp: ENSP00000415061.2:p.Arg620Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2406G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2156G>C
  hgvsp: ENSP00000439875.1:p.Arg719Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.833G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2969G>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg732Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

12-121746357-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746357
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746357
    reference: chr 12
allele count: 5
allele frequency: 4.119226903494752e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*329C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1858C>T
  hgvsp: ENSP00000415061.2:p.Arg620Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1192C>T
  hgvsp: ENSP00000438754.1:p.Arg398Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1312C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2155C>T
  hgvsp: ENSP00000439875.1:p.Arg719Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2194C>T
  hgvsp: ENSP00000261819.3:p.Arg732Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1858C>T
  hgvsp: ENSP00000343787.4:p.Arg620Trp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2968C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.832C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2405C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg732Trp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

12-121746358-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746358
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746358
    reference: chr 12
allele count: 4
allele frequency: 3.295272930980509e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1311C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.831C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1857C>A
  hgvsp: ENSP00000343787.4:p.Asn619Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2193C>A
  hgvsp: ENSP00000261819.3:p.Asn731Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1191C>A
  hgvsp: ENSP00000438754.1:p.Asn397Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2154C>A
  hgvsp: ENSP00000439875.1:p.Asn718Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*328C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1857C>A
  hgvsp: ENSP00000415061.2:p.Asn619Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2967C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2404C>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn731Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

12-121746366-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746366
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746366
    reference: chr 12
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2146G>A
  hgvsp: ENSP00000439875.1:p.Glu716Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1183G>A
  hgvsp: ENSP00000438754.1:p.Glu395Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1849G>A
  hgvsp: ENSP00000415061.2:p.Glu617Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1303G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1849G>A
  hgvsp: ENSP00000343787.4:p.Glu617Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2959G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2396G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2185G>A
  hgvsp: ENSP00000261819.3:p.Glu729Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*320G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.823G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu729Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

12-121746385-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746385
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746385
    reference: chr 12
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1164T>C
  hgvsp: ENST00000535482.1:c.1164T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2377T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1830T>C
  hgvsp: ENST00000441917.2:c.1830T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*301T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2166T>C
  hgvsp: ENST00000261819.3:c.2166T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1284T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1830T>C
  hgvsp: ENST00000344395.4:c.1830T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.804T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2127T>C
  hgvsp: ENST00000541887.1:c.2127T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2940T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His722His
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

12-121746387-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746387
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746387
    reference: chr 12
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1828C>T
  hgvsp: ENSP00000415061.2:p.His610Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1162C>T
  hgvsp: ENSP00000438754.1:p.His388Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2938C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*299C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2125C>T
  hgvsp: ENSP00000439875.1:p.His709Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2375C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1282C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2164C>T
  hgvsp: ENSP00000261819.3:p.His722Tyr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.802C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1828C>T
  hgvsp: ENSP00000343787.4:p.His610Tyr
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His722Tyr
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

12-121746387-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746387
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746387
    reference: chr 12
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1828C>G
  hgvsp: ENSP00000415061.2:p.His610Asp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1162C>G
  hgvsp: ENSP00000438754.1:p.His388Asp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.802C>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2125C>G
  hgvsp: ENSP00000439875.1:p.His709Asp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1282C>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2375C>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1828C>G
  hgvsp: ENSP00000343787.4:p.His610Asp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2164C>G
  hgvsp: ENSP00000261819.3:p.His722Asp
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2938C>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*299C>G
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His722Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

12-121746389-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746389
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746389
    reference: chr 12
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2373A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1826A>G
  hgvsp: ENSP00000343787.4:p.Tyr609Cys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1160A>G
  hgvsp: ENSP00000438754.1:p.Tyr387Cys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2162A>G
  hgvsp: ENSP00000261819.3:p.Tyr721Cys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2123A>G
  hgvsp: ENSP00000439875.1:p.Tyr708Cys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1826A>G
  hgvsp: ENSP00000415061.2:p.Tyr609Cys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1280A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.800A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*297A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2936A>G
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr721Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-121746392-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746392
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746392
    reference: chr 12
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1157T>C
  hgvsp: ENSP00000438754.1:p.Leu386Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2159T>C
  hgvsp: ENSP00000261819.3:p.Leu720Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2933T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1277T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*294T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1823T>C
  hgvsp: ENSP00000343787.4:p.Leu608Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2370T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1823T>C
  hgvsp: ENSP00000415061.2:p.Leu608Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2120T>C
  hgvsp: ENSP00000439875.1:p.Leu707Pro
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.797T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3576
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8431
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu720Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

12-121746399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746399
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746399
    reference: chr 12
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1270G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2152G>A
  hgvsp: ENSP00000261819.3:p.Ala718Thr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1816G>A
  hgvsp: ENSP00000415061.2:p.Ala606Thr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1150G>A
  hgvsp: ENSP00000438754.1:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.790G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2363G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*287G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1816G>A
  hgvsp: ENSP00000343787.4:p.Ala606Thr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2113G>A
  hgvsp: ENSP00000439875.1:p.Ala705Thr
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2926G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala718Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

12-121746402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746402
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746402
    reference: chr 12
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1813C>T
  hgvsp: ENSP00000415061.2:p.Gln605Ter
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2110C>T
  hgvsp: ENSP00000439875.1:p.Gln704Ter
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*284C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1147C>T
  hgvsp: ENSP00000438754.1:p.Gln383Ter
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.787C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1267C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2360C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1813C>T
  hgvsp: ENSP00000343787.4:p.Gln605Ter
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2149C>T
  hgvsp: ENSP00000261819.3:p.Gln717Ter
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2923C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln717Ter
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

12-121746403-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746403
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746403
    reference: chr 12
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1812C>T
  hgvsp: ENST00000344395.4:c.1812C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1266C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2109C>T
  hgvsp: ENST00000541887.1:c.2109C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*283C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2148C>T
  hgvsp: ENST00000261819.3:c.2148C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1812C>T
  hgvsp: ENST00000441917.2:c.1812C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1146C>T
  hgvsp: ENST00000535482.1:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2359C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2922C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.786C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe716Phe
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/12-121746405-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746405
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746405
    reference: chr 12
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2920T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2107T>G
  hgvsp: ENSP00000439875.1:p.Phe703Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*281T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1264T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2146T>G
  hgvsp: ENSP00000261819.3:p.Phe716Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1810T>G
  hgvsp: ENSP00000343787.4:p.Phe604Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.784T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1144T>G
  hgvsp: ENSP00000438754.1:p.Phe382Val
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2357T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1810T>G
  hgvsp: ENSP00000415061.2:p.Phe604Val
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5130
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe716Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

12-121746406-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746406
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746406
    reference: chr 12
allele count: 187
allele frequency: 1.540286312043886e-3
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*280C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1809C>T
  hgvsp: ENST00000441917.2:c.1809C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2145C>T
  hgvsp: ENST00000261819.3:c.2145C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1809C>T
  hgvsp: ENST00000344395.4:c.1809C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2106C>T
  hgvsp: ENST00000541887.1:c.2106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1143C>T
  hgvsp: ENST00000535482.1:c.1143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.783C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1263C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2356C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2919C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr715Tyr
num of homozygotes: 2
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

12-121746411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746411
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746411
    reference: chr 12
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1804G>A
  hgvsp: ENSP00000343787.4:p.Val602Ile
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1804G>A
  hgvsp: ENSP00000415061.2:p.Val602Ile
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.778G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2101G>A
  hgvsp: ENSP00000439875.1:p.Val701Ile
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1138G>A
  hgvsp: ENSP00000438754.1:p.Val380Ile
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1258G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2914G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2140G>A
  hgvsp: ENSP00000261819.3:p.Val714Ile
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*275G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2351G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val714Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

12-121746415-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746415
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746415
    reference: chr 12
allele count: 176
allele frequency: 1.449681234864834e-3
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1254C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1800C>T
  hgvsp: ENST00000441917.2:c.1800C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*271C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2347C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.774C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2097C>T
  hgvsp: ENST00000541887.1:c.2097C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2910C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1800C>T
  hgvsp: ENST00000344395.4:c.1800C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1134C>T
  hgvsp: ENST00000535482.1:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2136C>T
  hgvsp: ENST00000261819.3:c.2136C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15200
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9197
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 27306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp712Asp
num of homozygotes: 2
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

12-121746424-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746424
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746424
    reference: chr 12
allele count: 3
allele frequency: 2.471088267272907e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.765C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1791C>T
  hgvsp: ENST00000344395.4:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2901C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*262C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2127C>T
  hgvsp: ENST00000261819.3:c.2127C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2088C>T
  hgvsp: ENST00000541887.1:c.2088C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1125C>T
  hgvsp: ENST00000535482.1:c.1125C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1791C>T
  hgvsp: ENST00000441917.2:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1245C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2338C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg709Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP

12-121746433-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746433
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746433
    reference: chr 12
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*253C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2892C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1236C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2118C>T
  hgvsp: ENST00000261819.3:c.2118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1782C>T
  hgvsp: ENST00000441917.2:c.1782C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.756C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1782C>T
  hgvsp: ENST00000344395.4:c.1782C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2079C>T
  hgvsp: ENST00000541887.1:c.2079C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1116C>T
  hgvsp: ENST00000535482.1:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2329C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5122
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys706Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

12-121746440-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746440
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746440
    reference: chr 12
allele count: 20
allele frequency: 1.647446457990115e-4
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*246T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1229T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2072T>C
  hgvsp: ENSP00000439875.1:p.Val691Ala
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1109T>C
  hgvsp: ENSP00000438754.1:p.Val370Ala
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1775T>C
  hgvsp: ENSP00000415061.2:p.Val592Ala
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2111T>C
  hgvsp: ENSP00000261819.3:p.Val704Ala
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2322T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1775T>C
  hgvsp: ENSP00000343787.4:p.Val592Ala
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.749T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2885T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29552
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val704Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/12-121746442-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746442
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746442
    reference: chr 12
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1227G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1107G>T
  hgvsp: ENSP00000438754.1:p.Lys369Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1773G>T
  hgvsp: ENSP00000343787.4:p.Lys591Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.747G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2109G>T
  hgvsp: ENSP00000261819.3:p.Lys703Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1773G>T
  hgvsp: ENSP00000415061.2:p.Lys591Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*244G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2070G>T
  hgvsp: ENSP00000439875.1:p.Lys690Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2883G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2320G>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys703Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

12-121746466-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746466
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746466
    reference: chr 12
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2085T>C
  hgvsp: ENST00000261819.3:c.2085T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2046T>C
  hgvsp: ENST00000541887.1:c.2046T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*220T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1749T>C
  hgvsp: ENST00000344395.4:c.1749T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1749T>C
  hgvsp: ENST00000441917.2:c.1749T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2296T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.723T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1203T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1083T>C
  hgvsp: ENST00000535482.1:c.1083T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2859T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn695Asn
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-121746467-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746467
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746467
    reference: chr 12
allele count: 6
allele frequency: 4.943561011782154e-5
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.722A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1202A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2084A>G
  hgvsp: ENSP00000261819.3:p.Asn695Ser
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1748A>G
  hgvsp: ENSP00000415061.2:p.Asn583Ser
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2045A>G
  hgvsp: ENSP00000439875.1:p.Asn682Ser
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1748A>G
  hgvsp: ENSP00000343787.4:p.Asn583Ser
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2858A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1082A>G
  hgvsp: ENSP00000438754.1:p.Asn361Ser
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2295A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*219A>G
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn695Ser
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

12-121746468-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746468
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746468
    reference: chr 12
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2083A>C
  hgvsp: ENSP00000261819.3:p.Asn695His
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2857A>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1201A>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.721A>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1747A>C
  hgvsp: ENSP00000415061.2:p.Asn583His
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*218A>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1747A>C
  hgvsp: ENSP00000343787.4:p.Asn583His
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2294A>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1081A>C
  hgvsp: ENSP00000438754.1:p.Asn361His
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2044A>C
  hgvsp: ENSP00000439875.1:p.Asn682His
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn695His
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

12-121746477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746477
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746477
    reference: chr 12
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1738G>A
  hgvsp: ENSP00000415061.2:p.Glu580Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1192G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.712G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1072G>A
  hgvsp: ENSP00000438754.1:p.Glu358Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2848G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2285G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1738G>A
  hgvsp: ENSP00000343787.4:p.Glu580Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2074G>A
  hgvsp: ENSP00000261819.3:p.Glu692Lys
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*209G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2035G>A
  hgvsp: ENSP00000439875.1:p.Glu679Lys
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5119
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu692Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

12-121746478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746478
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746478
    reference: chr 12
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1737C>T
  hgvsp: ENST00000344395.4:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*208C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2073C>T
  hgvsp: ENST00000261819.3:c.2073C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2847C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1071C>T
  hgvsp: ENST00000535482.1:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2034C>T
  hgvsp: ENST00000541887.1:c.2034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2284C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1737C>T
  hgvsp: ENST00000441917.2:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1191C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.711C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile691Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

12-121746498-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746498
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746498
    reference: chr 12
allele count: 2
allele frequency: 1.648940555692967e-5
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-4T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-4T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5108
  bin: 7.75e1
  variant carriers: 0
hgvs: c.2057-4T>C
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/12-121746499-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746499
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746499
    reference: chr 12
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-5G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-5G>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29249
  bin: 6.25e1
  variant carriers: 0
hgvs: c.2057-5G>T
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

12-121746499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746499
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746499
    reference: chr 12
allele count: 2
allele frequency: 1.649049323065253e-5
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-5G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-5G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 8.75e1
  variant carriers: 0
hgvs: c.2057-5G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

12-121746500-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746500
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746500
    reference: chr 12
allele count: 19
allele frequency: 1.566777715473167e-4
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-6C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-6C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15147
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8363
  bin: 6.75e1
  variant carriers: 0
hgvs: c.2057-6C>T
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-121746502-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746502
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746502
    reference: chr 12
allele count: 3
allele frequency: 2.47390035129385e-5
allele num: 121266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-8T>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-8T>G
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: c.2057-8T>G
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

12-121746516-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746516
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746516
    reference: chr 12
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-22G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-22G>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

12-121746520-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746520
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746520
    reference: chr 12
allele count: 2
allele frequency: 1.650519088253256e-5
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-26G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3738
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

12-121746526-TAACTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746526
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746521
    reference: chr 12
allele count: 18
allele frequency: 1.485957699737481e-4
allele num: 121134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-37_2268-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-37_695-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-37_2057-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-37_1175-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-37_2831-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-37_1721-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-37_*192-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-37_1055-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-37_1721-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-37_2018-33delGAGTT
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9206
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: TAACTC
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/12-121746534-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746534
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746534
    reference: chr 12
allele count: 1
allele frequency: 8.259275166011431e-6
allele num: 121076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-40G>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-40G>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

12-121746539-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746539
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746539
    reference: chr 12
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-45G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-45G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

12-121746541-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746541
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746541
    reference: chr 12
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-47G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-47G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

12-121746541-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746541
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746541
    reference: chr 12
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-47G>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-47G>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14594
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

12-121746542-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746542
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746542
    reference: chr 12
allele count: 3852
allele frequency: 3.190696287460862e-2
allele num: 120726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-48C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-48C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 3.75e1
  variant carriers: 532
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 512
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 253
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 14150
  bin: 2.75e1
  variant carriers: 279
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 23303
  bin: 2.25e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 4.25e1
  variant carriers: 552
genotype depth: GenotypeDepth
  all individuals: 8843
  bin: 3.25e1
  variant carriers: 438
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.25e1
  variant carriers: 361
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 4
num of homozygotes: 79
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

12-121746544-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746544
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746544
    reference: chr 12
allele count: 5
allele frequency: 4.141747154619705e-5
allele num: 120722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-50T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-50T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9039
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5083
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

12-121746546-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746546
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746546
    reference: chr 12
allele count: 2
allele frequency: 1.657467720816137e-5
allele num: 120666
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-52T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-52T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9338
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19012
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

12-121746546-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121746546
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121746546
    reference: chr 12
allele count: 1
allele frequency: 8.287338604080686e-6
allele num: 120666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2268-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1721-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*192-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2018-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2057-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1721-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1175-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1055-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.695-52T>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2831-52T>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9338
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19012
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

12-121747457-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747457
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747457
    reference: chr 12
allele count: 13
allele frequency: 1.101284266883535e-4
allele num: 118044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1174+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1720+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2830+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2056+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1054+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2267+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.694+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*191+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1720+47A>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2017+47A>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

12-121747457-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747457
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747457
    reference: chr 12
allele count: 1
allele frequency: 8.471417437565653e-6
allele num: 118044
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2056+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2267+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1720+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1720+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.694+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1174+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1054+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2017+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*191+47A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2830+47A>G
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29870
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

12-121747463-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747463
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747463
    reference: chr 12
allele count: 1
allele frequency: 8.472422265525714e-6
allele num: 118030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2267+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1054+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.694+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2830+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1720+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1720+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2017+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2056+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*191+41G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1174+41G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29860
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

12-121747470-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747470
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747470
    reference: chr 12
allele count: 1
allele frequency: 8.457231778894133e-6
allele num: 118242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2830+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1720+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2267+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2017+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*191+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1054+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1720+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1174+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2056+34T>C
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.694+34T>C
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP

12-121747478-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747478
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747478
    reference: chr 12
allele count: 10
allele frequency: 8.439673215853082e-5
allele num: 118488
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1720+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1720+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.694+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2017+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*191+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1174+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2056+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2267+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1054+26G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2830+26G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7592
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-121747488-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747488
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747488
    reference: chr 12
allele count: 1
allele frequency: 8.400819920024195e-6
allele num: 119036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2017+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1720+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1174+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1054+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2830+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1720+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.694+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2056+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2267+16A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*191+16A>G
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29860
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

12-121747489-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747489
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747489
    reference: chr 12
allele count: 2
allele frequency: 1.679684219366759e-5
allele num: 119070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*191+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2830+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1054+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1174+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2056+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1720+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2267+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1720+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.694+15G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2017+15G>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-121747504-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747504
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747503
    reference: chr 12
allele count: 1
allele frequency: 8.314210648840998e-6
allele num: 120276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.693delA
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1053delA
  hgvsp: ENSP00000438754.1:p.Ala352LeufsTer66
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1719delA
  hgvsp: ENSP00000415061.2:p.Ala574LeufsTer66
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2055delA
  hgvsp: ENSP00000261819.3:p.Ala686LeufsTer66
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2266delA
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2829delA
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2016delA
  hgvsp: ENSP00000439875.1:p.Ala673LeufsTer66
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1173delA
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1719delA
  hgvsp: ENSP00000343787.4:p.Ala574LeufsTer66
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*190delA
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala686LeufsTer66
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: CT
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS

12-121747512-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747512
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747512
    reference: chr 12
allele count: 5
allele frequency: 4.142021637921037e-5
allele num: 120714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2822A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*183A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1712A>G
  hgvsp: ENSP00000415061.2:p.Lys571Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1046A>G
  hgvsp: ENSP00000438754.1:p.Lys349Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.686A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1166A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2009A>G
  hgvsp: ENSP00000439875.1:p.Lys670Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2259A>G
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1712A>G
  hgvsp: ENSP00000343787.4:p.Lys571Arg
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2048A>G
  hgvsp: ENSP00000261819.3:p.Lys683Arg
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6508
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3491
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys683Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

12-121747517-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747517
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747517
    reference: chr 12
allele count: 1123
allele frequency: 9.28989775321796e-3
allele num: 120884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2004G>A
  hgvsp: ENST00000541887.1:c.2004G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2817G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.681G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1161G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1041G>A
  hgvsp: ENST00000535482.1:c.1041G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1707G>A
  hgvsp: ENST00000344395.4:c.1707G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2254G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2043G>A
  hgvsp: ENST00000261819.3:c.2043G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*178G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1707G>A
  hgvsp: ENST00000441917.2:c.1707G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 7.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 2.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 4.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7248
  bin: 3.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 8.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 6.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 5696
  bin: 5.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 6.25e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 5.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 4.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 6820
  bin: 3.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 6365
  bin: 2.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.75e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro681Pro
num of homozygotes: 18
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

12-121747518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747518
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747518
    reference: chr 12
allele count: 9
allele frequency: 7.44256818219407e-5
allele num: 120926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*177C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1706C>T
  hgvsp: ENSP00000415061.2:p.Pro569Leu
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1706C>T
  hgvsp: ENSP00000343787.4:p.Pro569Leu
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.680C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2003C>T
  hgvsp: ENSP00000439875.1:p.Pro668Leu
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2042C>T
  hgvsp: ENSP00000261819.3:p.Pro681Leu
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1040C>T
  hgvsp: ENSP00000438754.1:p.Pro347Leu
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1160C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2816C>T
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2253C>T
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro681Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

12-121747518-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747518
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747518
    reference: chr 12
allele count: 1
allele frequency: 8.269520202437855e-6
allele num: 120926
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1160C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.2003C>A
  hgvsp: ENSP00000439875.1:p.Pro668Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2042C>A
  hgvsp: ENSP00000261819.3:p.Pro681Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2253C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1706C>A
  hgvsp: ENSP00000415061.2:p.Pro569Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1040C>A
  hgvsp: ENSP00000438754.1:p.Pro347Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.680C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*177C>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1706C>A
  hgvsp: ENSP00000343787.4:p.Pro569Gln
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2816C>A
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro681Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

12-121747525-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121747525
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121747525
    reference: chr 12
allele count: 7
allele frequency: 5.781970165033948e-5
allele num: 121066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000343787
  ensembl transcript: ENST00000344395
  gene symbol: ANAPC5
  hgvsc: ENST00000344395.4:c.1699G>A
  hgvsp: ENSP00000343787.4:p.Asp567Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000437857
  ensembl transcript: ENST00000539079
  gene symbol: ANAPC5
  hgvsc: ENST00000539079.1:c.*170G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000535641
  gene symbol: ANAPC5
  hgvsc: ENST00000535641.1:n.2246G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000415061
  ensembl transcript: ENST00000441917
  gene symbol: ANAPC5
  hgvsc: ENST00000441917.2:c.1699G>A
  hgvsp: ENSP00000415061.2:p.Asp567Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000534976
  gene symbol: ANAPC5
  hgvsc: ENST00000534976.1:n.2809G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000261819
  ensembl transcript: ENST00000261819
  gene symbol: ANAPC5
  hgvsc: ENST00000261819.3:c.2035G>A
  hgvsp: ENSP00000261819.3:p.Asp679Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000439875
  ensembl transcript: ENST00000541887
  gene symbol: ANAPC5
  hgvsc: ENST00000541887.1:c.1996G>A
  hgvsp: ENSP00000439875.1:p.Asp666Asn
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000544314
  gene symbol: ANAPC5
  hgvsc: ENST00000544314.1:n.1153G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000089053
  ensembl transcript: ENST00000422342
  gene symbol: ANAPC5
  hgvsc: ENST00000422342.2:n.673G>A
  variant of: http://identifiers.org/hgnc/15713
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000089053
  ensembl protein: ENSP00000438754
  ensembl transcript: ENST00000535482
  gene symbol: ANAPC5
  hgvsc: ENST00000535482.1:c.1033G>A
  hgvsp: ENSP00000438754.1:p.Asp345Asn
  variant of: http://identifiers.org/hgnc/15713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7078
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp679Asn
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3176
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2200
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553470452991984e-5
allele num: 64372
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.341e0

QD
type: SiteQuality
SIO_000300: 5.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.138e0

DP
type: SiteQuality
SIO_000300: 1.575968e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.941e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.437e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 3688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6166
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8176
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65916
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.641775272983445e-4
allele num: 11356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.328e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.526e0

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.64944e6

QD
type: SiteQuality
SIO_000300: 1.336e1

GenotypeQuality
all individuals: 249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29410
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3728
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5100
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1619
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8398
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.723842862699339e-5
allele num: 10284
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.024e0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.268e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
SIO_000300: 1.672946e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.235e1

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6188
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5106
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29517
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.106e0

DP
type: SiteQuality
SIO_000300: 1.674585e6

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.055e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 1.335e1

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5108
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3598
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2090
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6189
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.239e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

DP
type: SiteQuality
SIO_000300: 1.678789e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 6.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.756e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5108
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6189
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3736
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29759
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.14e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

VQSLOD
type: SiteQuality
SIO_000300: 4.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.186e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.678874e6

GenotypeQuality
all individuals: 3735
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.69e0

VQSLOD
type: SiteQuality
SIO_000300: 4.6e-2

QD
type: SiteQuality
SIO_000300: 1.459e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.679033e6

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7153
bin: 9.75e1
variant carriers: 1101

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3522
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5033
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 32
allele frequency: 2.766251728907331e-3
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 539
allele frequency: 3.265083595832324e-2
allele num: 16508
num of homozygotes: 13

European (Finnish)
type: Population
allele count: 71
allele frequency: 1.07348049591775e-2
allele num: 6614
num of homozygotes: 1

Other
type: Population
allele count: 10
allele frequency: 1.103752759381899e-2
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 427
allele frequency: 6.402375026239242e-3
allele num: 66694
num of homozygotes: 4

African
type: Population
allele count: 41
allele frequency: 3.943824547903039e-3
allele num: 10396
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.653e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.59e-2

FS
type: SiteQuality
SIO_000300: 2.868e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.778027e6

QD
type: SiteQuality
SIO_000300: 1.242e1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 6426
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8419
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5134
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.997720866070893e-5
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.694719e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.14e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

FS
type: SiteQuality
SIO_000300: 4.644e0

QD
type: SiteQuality
SIO_000300: 1.28e1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

MQRankSum
type: SiteQuality
SIO_000300: 3.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2136
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29496
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variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 5132
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 1630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8421
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6426
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 1.694747e6

QD
type: SiteQuality
SIO_000300: 1.143e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

FS
type: SiteQuality
SIO_000300: 6.605e0

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 2136
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 6426
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8421
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

QD
type: SiteQuality
SIO_000300: 1.143e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

DP
type: SiteQuality
SIO_000300: 1.694747e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
SIO_000300: 6.605e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

GenotypeQuality
all individuals: 3574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 29537
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 8425
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variant carriers: 0

GenotypeQuality
all individuals: 5130
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6426
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99805126667666e-5
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.846e0

DP
type: SiteQuality
SIO_000300: 1.695055e6

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 6425
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variant carriers: 2

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 5130
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 29545
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 3575
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GenotypeQuality
all individuals: 2138
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variant carriers: 0

GenotypeQuality
all individuals: 8426
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variant carriers: 0

GenotypeQuality
all individuals: 1630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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ClippingRankSum
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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MQ
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

East Asian
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South Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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VQSLOD
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QD
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MQ
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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Other
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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DP
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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Other
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East Asian
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South Asian
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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African
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Other
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Latino
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QD
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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Other
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Latino
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East Asian
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European (Finnish)
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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East Asian
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African
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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FS
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QD
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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QD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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MQ
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DP
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FS
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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South Asian
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East Asian
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European (Finnish)
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FS
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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Latino
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Other
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MQRankSum
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MQ
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VQSLOD
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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VQSLOD
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DP
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FS
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Finnish)
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South Asian
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East Asian
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QD
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Latino
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FS
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VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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QD
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MQRankSum
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DP
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GenotypeQuality
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African
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European (Finnish)
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DP
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 185

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 185
allele frequency: 2.137739773515138e-2
allele num: 8654
num of homozygotes: 2

South Asian
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allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 6.99e-1

ClippingRankSum
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SIO_000300: -2.76e-1

MQRankSum
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SIO_000300: 3.81e-1

QD
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SIO_000300: 1.266e1

VQSLOD
type: SiteQuality
SIO_000300: 5.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.09e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 1.72156e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.987e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.698551e6

FS
type: SiteQuality
SIO_000300: 5.74e-1

MQRankSum
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

BaseQRankSum
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SIO_000300: -1.746e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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variant carriers: 0

African
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allele count: 165
allele frequency: 1.585623678646934e-2
allele num: 10406
num of homozygotes: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 5.182242183451373e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495459585818323e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

QD
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InbreedingCoeff
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SIO_000300: 2.06e-2

VQSLOD
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ReadPosRankSum
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SIO_000300: 8.169999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.718853e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 3565
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495594317568783e-5
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.397e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

QD
type: SiteQuality
SIO_000300: 1.256e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.701095e6

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.188e1

MQRankSum
type: SiteQuality
SIO_000300: -6.18e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -4.375e0

DP
type: SiteQuality
SIO_000300: 1.700768e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.45e-1

GenotypeQuality
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variant carriers: 20

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.211240310077519e-3
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.67e0

FS
type: SiteQuality
SIO_000300: 2.722e0

QD
type: SiteQuality
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MQRankSum
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ClippingRankSum
type: SiteQuality
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MQ
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.702955e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.386e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.700782e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8404
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.70029e6

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 1.245e1

InbreedingCoeff
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SIO_000300: 0.0e0

FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -7.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6511
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.700705e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.328e1

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.27e0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8404
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

DP
type: SiteQuality
SIO_000300: 1.700352e6

MQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 5.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

QD
type: SiteQuality
SIO_000300: 1.219e1

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3743
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.018e-1

DP
type: SiteQuality
SIO_000300: 1.700009e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.91e0

FS
type: SiteQuality
SIO_000300: 1.687e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.493e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

QD
type: SiteQuality
SIO_000300: 1.24e1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5119
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variant carriers: 0

GenotypeQuality
all individuals: 29479
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3555
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.402e0

QD
type: SiteQuality
SIO_000300: 1.478e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.700065e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 8379
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variant carriers: 0

GenotypeQuality
all individuals: 3546
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 2146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29292
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6509
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000210014701029e-5
allele num: 66662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.74e0

QD
type: SiteQuality
SIO_000300: 1.426e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.697617e6

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6510
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-1

QD
type: SiteQuality
SIO_000300: 7.97e0

DP
type: SiteQuality
SIO_000300: 1.697517e6

GenotypeQuality
all individuals: 6510
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 147
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5107
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00048007681229e-5
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.697517e6

QD
type: SiteQuality
SIO_000300: 7.97e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 6524
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variant carriers: 19

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 1633
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5107
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29174
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3547
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.65051165861417e-4
allele num: 66646
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.053268765133172e-4
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

FS
type: SiteQuality
SIO_000300: 1.87e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

QD
type: SiteQuality
SIO_000300: 1.418e1

DP
type: SiteQuality
SIO_000300: 1.698232e6

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8367
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6515
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.887391722810395e-4
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

FS
type: SiteQuality
SIO_000300: 5.024e0

MQRankSum
type: SiteQuality
SIO_000300: -1.192e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

QD
type: SiteQuality
SIO_000300: 4.09e0

VQSLOD
type: SiteQuality
SIO_000300: 4.45e-1

DP
type: SiteQuality
SIO_000300: 1.696963e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.65e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3739
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GenotypeQuality
all individuals: 1636
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.465e0

QD
type: SiteQuality
SIO_000300: 1.429e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

DP
type: SiteQuality
SIO_000300: 1.693324e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.47e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.309e0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 221
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variant carriers: 0

GenotypeQuality
all individuals: 364
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variant carriers: 0

GenotypeQuality
all individuals: 28669
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.927525057825752e-4
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.691899e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

FS
type: SiteQuality
SIO_000300: 1.415e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.661e0

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.76e0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 3525
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variant carriers: 0

GenotypeQuality
all individuals: 70
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2149
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GenotypeQuality
all individuals: 8284
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1634
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6531
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.403412846241663e-4
allele num: 66572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730103806228374e-4
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

MQ
type: SiteQuality
SIO_000300: 5.128e1

MQRankSum
type: SiteQuality
SIO_000300: -5.066e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

FS
type: SiteQuality
SIO_000300: 4.27e0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 1.688461e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-2

QD
type: SiteQuality
SIO_000300: 1.029e1

GenotypeQuality
all individuals: 3733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

DP
type: SiteQuality
SIO_000300: 1.678111e6

QD
type: SiteQuality
SIO_000300: 1.095e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.105e0

MQRankSum
type: SiteQuality
SIO_000300: 6.68e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.335e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: -6.206e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.647e0

QD
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 1.675462e6

FS
type: SiteQuality
SIO_000300: 3.658e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

GenotypeQuality
all individuals: 3732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 232
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GenotypeQuality
all individuals: 826
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.67616e6

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 467
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variant carriers: 0

GenotypeQuality
all individuals: 608
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1633
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variant carriers: 0

GenotypeQuality
all individuals: 6517
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

DP
type: SiteQuality
SIO_000300: 1.67616e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

GenotypeQuality
all individuals: 899
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 567
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 4775
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3467
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2005
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 7456
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 453
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9796
bin: 9.75e1
variant carriers: 3746

GenotypeQuality
all individuals: 1448
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3231
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 229
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21754
bin: 6.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2826
allele frequency: 4.26038714346017e-2
allele num: 66332
num of homozygotes: 58

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 90
allele frequency: 7.801664355062413e-3
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 375
allele frequency: 5.678376741368867e-2
allele num: 6604
num of homozygotes: 11

Other
type: Population
allele count: 34
allele frequency: 3.78619153674833e-2
allele num: 898
num of homozygotes: 1

African
type: Population
allele count: 75
allele frequency: 7.270259790616518e-3
allele num: 10316
num of homozygotes: 0

South Asian
type: Population
allele count: 452
allele frequency: 2.743717372829914e-2
allele num: 16474
num of homozygotes: 9

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

QD
type: SiteQuality
SIO_000300: 1.473e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.501e0

DP
type: SiteQuality
SIO_000300: 1.740256e6

GenotypeQuality
all individuals: 2282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7619
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 557
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20382
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7694
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1978
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014590618593995e-5
allele num: 66344
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.601908065915004e-4
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.74e-1

QD
type: SiteQuality
SIO_000300: 1.668e1

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.62e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.733527e6

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7579
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3745
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5080
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7622
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66310
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.734304543877905e-4
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.072e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.654e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.748e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

DP
type: SiteQuality
SIO_000300: 1.739501e6

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7622
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 503
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7579
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5080
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3745
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508068164681044e-5
allele num: 66310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.072e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

QD
type: SiteQuality
SIO_000300: 1.654e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.748e-1

DP
type: SiteQuality
SIO_000300: 1.739501e6

GenotypeQuality
all individuals: 117
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6759
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29870
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 3477
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65518
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.162565394303429e-3
allele num: 10322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14584
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.244e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

DP
type: SiteQuality
SIO_000300: 2.562721e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

QD
type: SiteQuality
SIO_000300: 1.391e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

GenotypeQuality
all individuals: 252
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3437
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6759
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65518
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.856829402084476e-5
allele num: 14584
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.562721e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

FS
type: SiteQuality
SIO_000300: 1.244e0

QD
type: SiteQuality
SIO_000300: 1.391e1

MQ
type: SiteQuality
SIO_000300: 5.933e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

GenotypeQuality
all individuals: 1967
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3093
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7219
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3437
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526904049349539e-5
allele num: 65492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.565697e6

FS
type: SiteQuality
SIO_000300: 3.597e0

VQSLOD
type: SiteQuality
SIO_000300: 4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.163e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.13e-1

QD
type: SiteQuality
SIO_000300: 1.925e1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 3485
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1573
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29857
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2038
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3438
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525692664469669e-5
allele num: 65544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14730
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.05e-1

QD
type: SiteQuality
SIO_000300: 1.529e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

VQSLOD
type: SiteQuality
SIO_000300: 3.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

DP
type: SiteQuality
SIO_000300: 2.571342e6

GenotypeQuality
all individuals: 1490
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8680
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14852
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.161170459823502e-3
allele num: 8612
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.580748e6

VQSLOD
type: SiteQuality
SIO_000300: 4.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.14e-1

FS
type: SiteQuality
SIO_000300: 1.207e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.92e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

FS
type: SiteQuality
SIO_000300: 1.455e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

QD
type: SiteQuality
SIO_000300: 1.128e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 2.591526e6

VQSLOD
type: SiteQuality
SIO_000300: 6.39e-1

GenotypeQuality
all individuals: 3454
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9532
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.03702128951924e-5
allele num: 65854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.565e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

DP
type: SiteQuality
SIO_000300: 2.59344e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-1

QD
type: SiteQuality
SIO_000300: 1.221e1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 2035
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variant carriers: 0

GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 618
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GenotypeQuality
all individuals: 174
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GenotypeQuality
all individuals: 212
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 3932
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 29860
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 2045
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 3134
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variant carriers: 0

GenotypeQuality
all individuals: 10897
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variant carriers: 0

GenotypeQuality
all individuals: 3460
bin: 8.25e1
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GenotypeQuality
all individuals: 3493
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.288517167651868e-5
allele num: 15902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 6.107e1

DP
type: SiteQuality
SIO_000300: 2.615492e6

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.265e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

FS
type: SiteQuality
SIO_000300: 3.979e0

GenotypeQuality
all individuals: 407
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 29862
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 99
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010597302504817e-5
allele num: 66432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16184
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.621987e6

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

QD
type: SiteQuality
SIO_000300: 1.599e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

GenotypeQuality
all individuals: 3913
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 3468
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GenotypeQuality
all individuals: 75
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GenotypeQuality
all individuals: 301
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GenotypeQuality
all individuals: 77
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GenotypeQuality
all individuals: 86
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GenotypeQuality
all individuals: 2018
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variant carriers: 2

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 106
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GenotypeQuality
all individuals: 2021
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variant carriers: 1

GenotypeQuality
all individuals: 11550
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variant carriers: 0

GenotypeQuality
all individuals: 3424
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 30308
bin: 9.75e1
variant carriers: 1099

African
type: Population
allele count: 42
allele frequency: 4.041570438799076e-3
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 71
allele frequency: 1.07348049591775e-2
allele num: 6614
num of homozygotes: 1

Other
type: Population
allele count: 10
allele frequency: 1.108647450110865e-2
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 427
allele frequency: 6.42221152689207e-3
allele num: 66488
num of homozygotes: 4

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 32
allele frequency: 2.767208578346593e-3
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 540
allele frequency: 3.314103350926721e-2
allele num: 16294
num of homozygotes: 13

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

DP
type: SiteQuality
SIO_000300: 2.639788e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.51e-2

QD
type: SiteQuality
SIO_000300: 1.394e1

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 3525
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GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 92
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GenotypeQuality
all individuals: 79
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 29665
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11969
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variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729505361466621e-4
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503714174009804e-5
allele num: 66502
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.128201985537444e-5
allele num: 16318
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.810467577448528e-4
allele num: 10394
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

QD
type: SiteQuality
SIO_000300: 1.224e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

DP
type: SiteQuality
SIO_000300: 2.618607e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.26e-1

FS
type: SiteQuality
SIO_000300: 1.143e0

VQSLOD
type: SiteQuality
SIO_000300: 3.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.02e-1

GenotypeQuality
all individuals: 285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 29665
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variant carriers: 1

GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 3525
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GenotypeQuality
all individuals: 3471
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 4025
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.128201985537444e-5
allele num: 16318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66502
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.143e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

QD
type: SiteQuality
SIO_000300: 1.224e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

DP
type: SiteQuality
SIO_000300: 2.618607e6

VQSLOD
type: SiteQuality
SIO_000300: 3.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.02e-1