16-66943841-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943841
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943841
    reference: chr 16
allele count: 1
allele frequency: 8.927296100557064e-6
allele num: 112016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+48G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+48G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+48G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+48G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+48G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+48G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+48G>C
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4821
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3995
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

16-66943842-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943842
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943842
    reference: chr 16
allele count: 1
allele frequency: 8.925861791956013e-6
allele num: 112034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+47G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+47G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+47G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+47G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+47G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+47G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+47G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3997
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4823
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-66943845-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943845
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943845
    reference: chr 16
allele count: 1
allele frequency: 8.927614898403743e-6
allele num: 112012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+44G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+44G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+44G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+44G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+44G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+44G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+44G>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4822
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

16-66943845-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943845
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943845
    reference: chr 16
allele count: 2
allele frequency: 1.785522979680749e-5
allele num: 112012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+44G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+44G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+44G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+44G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+44G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+44G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+44G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3998
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3525
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

16-66943846-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943846
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943846
    reference: chr 16
allele count: 136
allele frequency: 1.213310732447141e-3
allele num: 112090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+43C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+43C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+43C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+43C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+43C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+43C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+43C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7779
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 9.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10029
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4841
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

16-66943846-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943846
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943846
    reference: chr 16
allele count: 1
allele frequency: 8.92140244446427e-6
allele num: 112090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+43C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+43C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+43C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+43C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+43C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+43C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+43C>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8503
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4033
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4841
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-66943851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943851
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943851
    reference: chr 16
allele count: 2
allele frequency: 1.782562969036881e-5
allele num: 112198
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+38G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+38G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+38G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+38G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+38G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+38G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+38G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4870
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4007
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

16-66943861-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943861
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943861
    reference: chr 16
allele count: 4
allele frequency: 3.555555555555555e-5
allele num: 112500
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+28A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+28A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+28A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+28A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+28A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+28A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+28A>G
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4888
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

16-66943872-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943872
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943872
    reference: chr 16
allele count: 1
allele frequency: 8.840951286358412e-6
allele num: 113110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+17G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+17G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+17G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+17G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+17G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+17G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+17G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24812
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8859
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

16-66943882-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943882
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943882
    reference: chr 16
allele count: 1
allele frequency: 8.778244000070226e-6
allele num: 113918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*743+7T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2158+7T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2035+7T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2275+7T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1984+7T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2209+7T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2439+7T>C
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4060
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24814
  bin: 9.75e1
  variant carriers: 1
hgvs: c.2275+7T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

16-66943891-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943891
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943891
    reference: chr 16
allele count: 1
allele frequency: 8.715508375603548e-6
allele num: 114738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2156G>A
  hgvsp: ENSP00000454784.1:p.Arg719Gln
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*741G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2273G>A
  hgvsp: ENSP00000299752.4:p.Arg758Gln
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1982G>A
  hgvsp: ENSP00000455263.1:p.Arg661Gln
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2033G>A
  hgvsp: ENSP00000456690.1:p.Arg678Gln
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2207G>A
  hgvsp: ENSP00000377619.3:p.Arg736Gln
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2437G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24813
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2998
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3540
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9475
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg758Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

16-66943896-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943896
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943896
    reference: chr 16
allele count: 1
allele frequency: 8.666562667914651e-6
allele num: 115386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2432G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2202G>C
  hgvsp: ENST00000394055.3:c.2202G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2268G>C
  hgvsp: ENST00000299752.4:c.2268G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1977G>C
  hgvsp: ENST00000568632.1:c.1977G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2151G>C
  hgvsp: ENST00000565796.1:c.2151G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2028G>C
  hgvsp: ENST00000570262.1:c.2028G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*736G>C
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4021
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3540
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu756Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

16-66943901-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943901
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943901
    reference: chr 16
allele count: 2
allele frequency: 1.725893581401771e-5
allele num: 115882
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2263C>A
  hgvsp: ENSP00000299752.4:p.Leu755Ile
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2427C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2197C>A
  hgvsp: ENSP00000377619.3:p.Leu733Ile
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2023C>A
  hgvsp: ENSP00000456690.1:p.Leu675Ile
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1972C>A
  hgvsp: ENSP00000455263.1:p.Leu658Ile
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2146C>A
  hgvsp: ENSP00000454784.1:p.Leu716Ile
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*731C>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5989
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2639
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4065
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3534
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu755Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

16-66943902-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943902
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943902
    reference: chr 16
allele count: 2
allele frequency: 1.722771594941943e-5
allele num: 116092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2196G>A
  hgvsp: ENST00000394055.3:c.2196G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2022G>A
  hgvsp: ENST00000570262.1:c.2022G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2426G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2145G>A
  hgvsp: ENST00000565796.1:c.2145G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1971G>A
  hgvsp: ENST00000568632.1:c.1971G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*730G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2262G>A
  hgvsp: ENST00000299752.4:c.2262G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3546
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln754Gln
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

16-66943905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943905
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943905
    reference: chr 16
allele count: 1
allele frequency: 8.567658801555887e-6
allele num: 116718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2193G>A
  hgvsp: ENSP00000377619.3:p.Trp731Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2423G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2259G>A
  hgvsp: ENSP00000299752.4:p.Trp753Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1968G>A
  hgvsp: ENSP00000455263.1:p.Trp656Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2019G>A
  hgvsp: ENSP00000456690.1:p.Trp673Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2142G>A
  hgvsp: ENSP00000454784.1:p.Trp714Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*727G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24757
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Trp753Ter
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

16-66943915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943915
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943915
    reference: chr 16
allele count: 2
allele frequency: 1.693050029628376e-5
allele num: 118130
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2249C>T
  hgvsp: ENSP00000299752.4:p.Ala750Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2413C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2132C>T
  hgvsp: ENSP00000454784.1:p.Ala711Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1958C>T
  hgvsp: ENSP00000455263.1:p.Ala653Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2183C>T
  hgvsp: ENSP00000377619.3:p.Ala728Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*717C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2009C>T
  hgvsp: ENSP00000456690.1:p.Ala670Val
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4095
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala750Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

16-66943921-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943921
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943921
    reference: chr 16
allele count: 2
allele frequency: 1.684040349606777e-5
allele num: 118762
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2243A>G
  hgvsp: ENSP00000299752.4:p.His748Arg
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.2003A>G
  hgvsp: ENSP00000456690.1:p.His668Arg
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2177A>G
  hgvsp: ENSP00000377619.3:p.His726Arg
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2407A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1952A>G
  hgvsp: ENSP00000455263.1:p.His651Arg
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2126A>G
  hgvsp: ENSP00000454784.1:p.His709Arg
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*711A>G
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His748Arg
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

16-66943926-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943926
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943926
    reference: chr 16
allele count: 1
allele frequency: 8.389824820457749e-6
allele num: 119192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1947C>T
  hgvsp: ENST00000568632.1:c.1947C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1998C>T
  hgvsp: ENST00000570262.1:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2238C>T
  hgvsp: ENST00000299752.4:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2172C>T
  hgvsp: ENST00000394055.3:c.2172C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2121C>T
  hgvsp: ENST00000565796.1:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2402C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*706C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12537
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val746Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

16-66943930-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943930
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943930
    reference: chr 16
allele count: 1
allele frequency: 8.371142995864656e-6
allele num: 119458
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1943T>A
  hgvsp: ENSP00000455263.1:p.Val648Glu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1994T>A
  hgvsp: ENSP00000456690.1:p.Val665Glu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2398T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2168T>A
  hgvsp: ENSP00000377619.3:p.Val723Glu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2117T>A
  hgvsp: ENSP00000454784.1:p.Val706Glu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*702T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2234T>A
  hgvsp: ENSP00000299752.4:p.Val745Glu
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10186
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5132
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val745Glu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

16-66943931-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943931
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943931
    reference: chr 16
allele count: 1
allele frequency: 8.367220576668843e-6
allele num: 119514
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2233G>C
  hgvsp: ENSP00000299752.4:p.Val745Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2397G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*701G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2116G>C
  hgvsp: ENSP00000454784.1:p.Val706Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1942G>C
  hgvsp: ENSP00000455263.1:p.Val648Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1993G>C
  hgvsp: ENSP00000456690.1:p.Val665Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2167G>C
  hgvsp: ENSP00000377619.3:p.Val723Leu
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12741
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24758
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val745Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-66943934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943934
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943934
    reference: chr 16
allele count: 4
allele frequency: 3.342692873378794e-5
allele num: 119664
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2230G>A
  hgvsp: ENSP00000299752.4:p.Val744Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2394G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*698G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2113G>A
  hgvsp: ENSP00000454784.1:p.Val705Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2164G>A
  hgvsp: ENSP00000377619.3:p.Val722Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1990G>A
  hgvsp: ENSP00000456690.1:p.Val664Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1939G>A
  hgvsp: ENSP00000455263.1:p.Val647Met
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4027
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12855
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val744Met
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

16-66943935-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943935
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943935
    reference: chr 16
allele count: 4
allele frequency: 3.341129301703976e-5
allele num: 119720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2112C>T
  hgvsp: ENST00000565796.1:c.2112C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1938C>T
  hgvsp: ENST00000568632.1:c.1938C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1989C>T
  hgvsp: ENST00000570262.1:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2229C>T
  hgvsp: ENST00000299752.4:c.2229C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2163C>T
  hgvsp: ENST00000394055.3:c.2163C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*697C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2393C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10203
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24754
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5144
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4028
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro743Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

16-66943939-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943939
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943939
    reference: chr 16
allele count: 1
allele frequency: 8.342370901810295e-6
allele num: 119870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2159T>A
  hgvsp: ENSP00000377619.3:p.Ile720Asn
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1934T>A
  hgvsp: ENSP00000455263.1:p.Ile645Asn
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2108T>A
  hgvsp: ENSP00000454784.1:p.Ile703Asn
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2389T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*693T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1985T>A
  hgvsp: ENSP00000456690.1:p.Ile662Asn
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2225T>A
  hgvsp: ENSP00000299752.4:p.Ile742Asn
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12971
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24752
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4026
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile742Asn
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

16-66943941-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943941
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943941
    reference: chr 16
allele count: 81
allele frequency: 6.754840969361376e-4
allele num: 119914
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*691A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2106A>G
  hgvsp: ENSP00000454784.1:p.Ile702Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1932A>G
  hgvsp: ENSP00000455263.1:p.Ile644Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2387A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1983A>G
  hgvsp: ENSP00000456690.1:p.Ile661Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2157A>G
  hgvsp: ENSP00000377619.3:p.Ile719Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2223A>G
  hgvsp: ENSP00000299752.4:p.Ile741Met
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 9.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 10196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile741Met
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

16-66943942-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943942
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943942
    reference: chr 16
allele count: 1
allele frequency: 8.338197281747686e-6
allele num: 119930
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2222T>C
  hgvsp: ENSP00000299752.4:p.Ile741Thr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2105T>C
  hgvsp: ENSP00000454784.1:p.Ile702Thr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2386T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1931T>C
  hgvsp: ENSP00000455263.1:p.Ile644Thr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2156T>C
  hgvsp: ENSP00000377619.3:p.Ile719Thr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*690T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1982T>C
  hgvsp: ENSP00000456690.1:p.Ile661Thr
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24710
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3551
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile741Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

16-66943946-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943946
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943946
    reference: chr 16
allele count: 1
allele frequency: 8.335973058135075e-6
allele num: 119962
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2101C>T
  hgvsp: ENSP00000454784.1:p.His701Tyr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2218C>T
  hgvsp: ENSP00000299752.4:p.His740Tyr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2152C>T
  hgvsp: ENSP00000377619.3:p.His718Tyr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1927C>T
  hgvsp: ENSP00000455263.1:p.His643Tyr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1978C>T
  hgvsp: ENSP00000456690.1:p.His660Tyr
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*686C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2382C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24709
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12968
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His740Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum

16-66943951-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943951
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943951
    reference: chr 16
allele count: 2
allele frequency: 1.667389201987528e-5
allele num: 119948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*681G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2096G>C
  hgvsp: ENSP00000454784.1:p.Arg699Pro
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2213G>C
  hgvsp: ENSP00000299752.4:p.Arg738Pro
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1973G>C
  hgvsp: ENSP00000456690.1:p.Arg658Pro
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2377G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1922G>C
  hgvsp: ENSP00000455263.1:p.Arg641Pro
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2147G>C
  hgvsp: ENSP00000377619.3:p.Arg716Pro
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12886
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24719
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg738Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

16-66943951-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943951
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943951
    reference: chr 16
allele count: 20
allele frequency: 1.667389201987528e-4
allele num: 119948
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2213G>A
  hgvsp: ENSP00000299752.4:p.Arg738His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2096G>A
  hgvsp: ENSP00000454784.1:p.Arg699His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1922G>A
  hgvsp: ENSP00000455263.1:p.Arg641His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1973G>A
  hgvsp: ENSP00000456690.1:p.Arg658His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*681G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2377G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2147G>A
  hgvsp: ENSP00000377619.3:p.Arg716His
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8730
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12886
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg738His
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

16-66943952-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943952
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943952
    reference: chr 16
allele count: 3
allele frequency: 2.50095870083532e-5
allele num: 119954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2146C>T
  hgvsp: ENSP00000377619.3:p.Arg716Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*680C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2212C>T
  hgvsp: ENSP00000299752.4:p.Arg738Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1921C>T
  hgvsp: ENSP00000455263.1:p.Arg641Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2095C>T
  hgvsp: ENSP00000454784.1:p.Arg699Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2376C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1972C>T
  hgvsp: ENSP00000456690.1:p.Arg658Cys
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5152
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2658
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4040
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg738Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

16-66943961-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943961
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943961
    reference: chr 16
allele count: 1
allele frequency: 8.344737808338063e-6
allele num: 119836
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1912G>A
  hgvsp: ENSP00000455263.1:p.Val638Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*671G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2203G>A
  hgvsp: ENSP00000299752.4:p.Val735Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2086G>A
  hgvsp: ENSP00000454784.1:p.Val696Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2367G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1963G>A
  hgvsp: ENSP00000456690.1:p.Val655Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2137G>A
  hgvsp: ENSP00000377619.3:p.Val713Met
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24699
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5139
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val735Met
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

16-66943963-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943963
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943963
    reference: chr 16
allele count: 1
allele frequency: 8.350730688935283e-6
allele num: 119750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1961G>A
  hgvsp: ENSP00000456690.1:p.Trp654Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2365G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*669G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2084G>A
  hgvsp: ENSP00000454784.1:p.Trp695Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1910G>A
  hgvsp: ENSP00000455263.1:p.Trp637Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2135G>A
  hgvsp: ENSP00000377619.3:p.Trp712Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2201G>A
  hgvsp: ENSP00000299752.4:p.Trp734Ter
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2645
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24699
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12507
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Trp734Ter
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-66943965-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943965
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943965
    reference: chr 16
allele count: 2
allele frequency: 1.670871693762636e-5
allele num: 119698
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2082T>C
  hgvsp: ENST00000565796.1:c.2082T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1959T>C
  hgvsp: ENST00000570262.1:c.1959T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2133T>C
  hgvsp: ENST00000394055.3:c.2133T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*667T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2199T>C
  hgvsp: ENST00000299752.4:c.2199T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1908T>C
  hgvsp: ENST00000568632.1:c.1908T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2363T>C
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12439
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His733His
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-66943976-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943976
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943976
    reference: chr 16
allele count: 1
allele frequency: 8.400537634408602e-6
allele num: 119040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*656T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1948T>A
  hgvsp: ENSP00000456690.1:p.Leu650Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2188T>A
  hgvsp: ENSP00000299752.4:p.Leu730Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1897T>A
  hgvsp: ENSP00000455263.1:p.Leu633Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2122T>A
  hgvsp: ENSP00000377619.3:p.Leu708Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2071T>A
  hgvsp: ENSP00000454784.1:p.Leu691Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2352T>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2640
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11410
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3551
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu730Met
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

16-66943977-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943977
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943977
    reference: chr 16
allele count: 1
allele frequency: 8.40152571707022e-6
allele num: 119026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*655C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1947C>T
  hgvsp: ENST00000570262.1:c.1947C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2351C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1896C>T
  hgvsp: ENST00000568632.1:c.1896C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2121C>T
  hgvsp: ENST00000394055.3:c.2121C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2070C>T
  hgvsp: ENST00000565796.1:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2187C>T
  hgvsp: ENST00000299752.4:c.2187C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4092
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr729Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

16-66943980-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943980
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943980
    reference: chr 16
allele count: 1
allele frequency: 8.410994852471151e-6
allele num: 118892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1893C>A
  hgvsp: ENST00000568632.1:c.1893C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1944C>A
  hgvsp: ENST00000570262.1:c.1944C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2118C>A
  hgvsp: ENST00000394055.3:c.2118C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*652C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2184C>A
  hgvsp: ENST00000299752.4:c.2184C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2067C>A
  hgvsp: ENST00000565796.1:c.2067C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2348C>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10208
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11348
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4093
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu728Leu
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

16-66943984-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943984
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943984
    reference: chr 16
allele count: 1
allele frequency: 8.43198758811427e-6
allele num: 118596
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2344A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2114A>G
  hgvsp: ENSP00000377619.3:p.Tyr705Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2063A>G
  hgvsp: ENSP00000454784.1:p.Tyr688Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2180A>G
  hgvsp: ENSP00000299752.4:p.Tyr727Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1940A>G
  hgvsp: ENSP00000456690.1:p.Tyr647Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*648A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1889A>G
  hgvsp: ENSP00000455263.1:p.Tyr630Cys
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10200
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2634
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24694
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10897
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr727Cys
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/16-66943996-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943996
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943996
    reference: chr 16
allele count: 1
allele frequency: 8.501088139281828e-6
allele num: 117632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928G>T
  hgvsp: ENSP00000456690.1:p.Gly643Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168G>T
  hgvsp: ENSP00000299752.4:p.Gly723Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877G>T
  hgvsp: ENSP00000455263.1:p.Gly626Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051G>T
  hgvsp: ENSP00000454784.1:p.Gly684Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102G>T
  hgvsp: ENSP00000377619.3:p.Gly701Val
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9642
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly723Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

16-66943996-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66943996
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66943996
    reference: chr 16
allele count: 1
allele frequency: 8.501088139281828e-6
allele num: 117632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877G>A
  hgvsp: ENSP00000455263.1:p.Gly626Asp
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168G>A
  hgvsp: ENSP00000299752.4:p.Gly723Asp
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928G>A
  hgvsp: ENSP00000456690.1:p.Gly643Asp
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051G>A
  hgvsp: ENSP00000454784.1:p.Gly684Asp
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102G>A
  hgvsp: ENSP00000377619.3:p.Gly701Asp
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9642
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4074
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly723Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

16-66944002-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944002
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944002
    reference: chr 16
allele count: 1
allele frequency: 8.536502082906508e-6
allele num: 117144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928-6C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877-6C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168-6C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636-6C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102-6C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332-6C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051-6C>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4026
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24686
  bin: 9.75e1
  variant carriers: 1
hgvs: c.2168-6C>A
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

16-66944003-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944003
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944003
    reference: chr 16
allele count: 1
allele frequency: 8.539855505644844e-6
allele num: 117098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928-7C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051-7C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636-7C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168-7C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332-7C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102-7C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877-7C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4938
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24685
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3550
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
hgvs: c.2168-7C>T
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-66944008-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944008
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944008
    reference: chr 16
allele count: 1
allele frequency: 8.576329331046313e-6
allele num: 116600
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168-12C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051-12C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928-12C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102-12C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636-12C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877-12C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332-12C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3186
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8863
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

16-66944012-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944012
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944012
    reference: chr 16
allele count: 1
allele frequency: 8.602002546192754e-6
allele num: 116252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332-16C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168-16C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636-16C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877-16C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928-16C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051-16C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102-16C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7869
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4063
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8615
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2329
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4852
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24675
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

16-66944013-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944013
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944013
    reference: chr 16
allele count: 1
allele frequency: 8.615342201392239e-6
allele num: 116072
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168-17G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332-17G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877-17G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051-17G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928-17G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636-17G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102-17G>C
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8654
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24673
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8657
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2590
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

16-66944027-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944027
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944027
    reference: chr 16
allele count: 1
allele frequency: 8.68870121294269e-6
allele num: 115092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877-31T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051-31T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102-31T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332-31T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928-31T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636-31T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168-31T>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7439
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3953
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3536
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7388
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24660
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3976
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

16-66944039-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944039
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944039
    reference: chr 16
allele count: 1
allele frequency: 8.741258741258741e-6
allele num: 114400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928-43T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051-43T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332-43T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636-43T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168-43T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877-43T>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102-43T>C
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2898
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2837
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3972
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

16-66944039-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944039
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944039
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 114400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*636-43T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2332-43T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2168-43T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2102-43T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2051-43T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1928-43T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1877-43T>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5944
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3972
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/16-66944113-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944113
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944112
    reference: chr 16
allele count: 1
allele frequency: 8.950468109482126e-6
allele num: 111726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+49delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+49delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+49delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+49delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+49delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+49delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+49delG
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9127
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1274
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3521
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: AC
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS

16-66944120-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944120
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944120
    reference: chr 16
allele count: 29
allele frequency: 2.591645963287994e-4
allele num: 111898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+43G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+43G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+43G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+43G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+43G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+43G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+43G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10632
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4140
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7069
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3410
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

16-66944121-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944121
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944121
    reference: chr 16
allele count: 1
allele frequency: 8.9391068044481e-6
allele num: 111868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+42G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+42G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+42G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+42G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+42G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+42G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+42G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10675
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5529
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

16-66944128-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944128
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944128
    reference: chr 16
allele count: 5
allele frequency: 4.461417660075666e-5
allele num: 112072
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+35A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+35A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+35A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+35A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+35A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+35A>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+35A>G
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9209
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5021
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9771
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3444
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4665
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

16-66944129-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944129
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944129
    reference: chr 16
allele count: 1
allele frequency: 8.923153799478887e-6
allele num: 112068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+34C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+34C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+34C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+34C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+34C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+34C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+34C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7088
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4192
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

16-66944131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944131
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944131
    reference: chr 16
allele count: 2
allele frequency: 1.784758165268606e-5
allele num: 112060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+32G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+32G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+32G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+32G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+32G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+32G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+32G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3577
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5614
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

16-66944134-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944134
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944134
    reference: chr 16
allele count: 3
allele frequency: 2.673272620341823e-5
allele num: 112222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+29G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+29G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+29G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+29G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+29G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+29G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+29G>C
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4681
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

16-66944138-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944138
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944138
    reference: chr 16
allele count: 6
allele frequency: 5.34045393858478e-5
allele num: 112350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+25G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+25G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+25G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+25G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+25G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+25G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+25G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20293
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9968
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2933
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3500
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

16-66944143-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944143
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944143
    reference: chr 16
allele count: 1
allele frequency: 8.883519295003909e-6
allele num: 112568
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+20A>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+20A>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+20A>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+20A>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+20A>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+20A>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+20A>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9459
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20306
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

16-66944144-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944144
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944144
    reference: chr 16
allele count: 1
allele frequency: 8.878786802571297e-6
allele num: 112628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+19G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+19G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+19G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+19G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+19G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+19G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+19G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10060
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20308
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4242
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/16-66944146-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944146
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944146
    reference: chr 16
allele count: 1
allele frequency: 8.871382693706642e-6
allele num: 112722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+17G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+17G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+17G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+17G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+17G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+17G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+17G>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5032
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4724
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3598
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10054
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

16-66944149-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944149
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944148
    reference: chr 16
allele count: 1
allele frequency: 8.862262712915862e-6
allele num: 112838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+13delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+13delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+13delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+13delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+13delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+13delG
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+13delG
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10117
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: TC
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

16-66944150-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944150
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944150
    reference: chr 16
allele count: 2
allele frequency: 1.772829613345861e-5
allele num: 112814
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*635+13G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2050+13G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2101+13G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2331+13G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1876+13G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2167+13G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1927+13G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3599
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10116
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4246
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

16-66944170-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944170
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944170
    reference: chr 16
allele count: 1
allele frequency: 8.749365670988854e-6
allele num: 114294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*628T>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1920T>A
  hgvsp: ENST00000570262.1:c.1920T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2160T>A
  hgvsp: ENST00000299752.4:c.2160T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1869T>A
  hgvsp: ENST00000568632.1:c.1869T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2043T>A
  hgvsp: ENST00000565796.1:c.2043T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2094T>A
  hgvsp: ENST00000394055.3:c.2094T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2324T>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr720Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-66944173-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944173
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944173
    reference: chr 16
allele count: 2
allele frequency: 1.747182667947934e-5
allele num: 114470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1866G>C
  hgvsp: ENSP00000455263.1:p.Gln622His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2091G>C
  hgvsp: ENSP00000377619.3:p.Gln697His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1917G>C
  hgvsp: ENSP00000456690.1:p.Gln639His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2040G>C
  hgvsp: ENSP00000454784.1:p.Gln680His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2321G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*625G>C
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2157G>C
  hgvsp: ENSP00000299752.4:p.Gln719His
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4734
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln719His
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

16-66944175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944175
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944175
    reference: chr 16
allele count: 1
allele frequency: 8.712926497752064e-6
allele num: 114772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2089C>T
  hgvsp: ENSP00000377619.3:p.Gln697Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*623C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1864C>T
  hgvsp: ENSP00000455263.1:p.Gln622Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1915C>T
  hgvsp: ENSP00000456690.1:p.Gln639Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2319C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2038C>T
  hgvsp: ENSP00000454784.1:p.Gln680Ter
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2155C>T
  hgvsp: ENSP00000299752.4:p.Gln719Ter
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4734
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3604
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln719Ter
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-66944178-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944178
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944178
    reference: chr 16
allele count: 1
allele frequency: 8.691117677733357e-6
allele num: 115060
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2035C>G
  hgvsp: ENSP00000454784.1:p.Leu679Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2152C>G
  hgvsp: ENSP00000299752.4:p.Leu718Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*620C>G
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1912C>G
  hgvsp: ENSP00000456690.1:p.Leu638Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2086C>G
  hgvsp: ENSP00000377619.3:p.Leu696Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1861C>G
  hgvsp: ENSP00000455263.1:p.Leu621Val
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2316C>G
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10911
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3039
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2715
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4253
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu718Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-66944180-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944180
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944180
    reference: chr 16
allele count: 986
allele frequency: 8.566910525309748e-3
allele num: 115094
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2150G>A
  hgvsp: ENSP00000299752.4:p.Arg717His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2314G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2033G>A
  hgvsp: ENSP00000454784.1:p.Arg678His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1910G>A
  hgvsp: ENSP00000456690.1:p.Arg637His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2084G>A
  hgvsp: ENSP00000377619.3:p.Arg695His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1859G>A
  hgvsp: ENSP00000455263.1:p.Arg620His
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*618G>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 6.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5054
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9538
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9174
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 5.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 6.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 4996
  bin: 4.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 5.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 3489
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4193
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5657
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg717His
num of homozygotes: 45
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS

16-66944181-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944181
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944181
    reference: chr 16
allele count: 9
allele frequency: 7.798554667868221e-5
allele num: 115406
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2149C>T
  hgvsp: ENSP00000299752.4:p.Arg717Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1858C>T
  hgvsp: ENSP00000455263.1:p.Arg620Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*617C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2032C>T
  hgvsp: ENSP00000454784.1:p.Arg678Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2083C>T
  hgvsp: ENSP00000377619.3:p.Arg695Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1909C>T
  hgvsp: ENSP00000456690.1:p.Arg637Cys
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2313C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11002
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4254
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4729
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg717Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-66944181-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944181
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944181
    reference: chr 16
allele count: 1
allele frequency: 8.665060742075802e-6
allele num: 115406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1858C>A
  hgvsp: ENSP00000455263.1:p.Arg620Ser
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2032C>A
  hgvsp: ENSP00000454784.1:p.Arg678Ser
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2083C>A
  hgvsp: ENSP00000377619.3:p.Arg695Ser
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2149C>A
  hgvsp: ENSP00000299752.4:p.Arg717Ser
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1909C>A
  hgvsp: ENSP00000456690.1:p.Arg637Ser
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2313C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*617C>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5779
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3539
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg717Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/16-66944183-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944183
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944183
    reference: chr 16
allele count: 1
allele frequency: 8.636771920127133e-6
allele num: 115784
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1856G>T
  hgvsp: ENSP00000455263.1:p.Trp619Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2030G>T
  hgvsp: ENSP00000454784.1:p.Trp677Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1907G>T
  hgvsp: ENSP00000456690.1:p.Trp636Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2081G>T
  hgvsp: ENSP00000377619.3:p.Trp694Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*615G>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2147G>T
  hgvsp: ENSP00000299752.4:p.Trp716Leu
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2311G>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3543
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20312
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp716Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS

16-66944188-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944188
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944188
    reference: chr 16
allele count: 10
allele frequency: 8.585754516106876e-5
allele num: 116472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*610G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1851G>A
  hgvsp: ENST00000568632.1:c.1851G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2306G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2025G>A
  hgvsp: ENST00000565796.1:c.2025G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2076G>A
  hgvsp: ENST00000394055.3:c.2076G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2142G>A
  hgvsp: ENST00000299752.4:c.2142G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1902G>A
  hgvsp: ENST00000570262.1:c.1902G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5776
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3546
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5816
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg714Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

16-66944190-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944190
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944190
    reference: chr 16
allele count: 2
allele frequency: 1.710981076549294e-5
allele num: 116892
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2304C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1900C>T
  hgvsp: ENSP00000456690.1:p.Arg634Trp
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2140C>T
  hgvsp: ENSP00000299752.4:p.Arg714Trp
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1849C>T
  hgvsp: ENSP00000455263.1:p.Arg617Trp
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2023C>T
  hgvsp: ENSP00000454784.1:p.Arg675Trp
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*608C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2074C>T
  hgvsp: ENSP00000377619.3:p.Arg692Trp
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5851
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20307
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3595
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg714Trp
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-66944190-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944190
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944190
    reference: chr 16
allele count: 1
allele frequency: 8.554905382746468e-6
allele num: 116892
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2140C>A
  hgvsp: ENST00000299752.4:c.2140C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2023C>A
  hgvsp: ENST00000565796.1:c.2023C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2074C>A
  hgvsp: ENST00000394055.3:c.2074C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1900C>A
  hgvsp: ENST00000570262.1:c.1900C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1849C>A
  hgvsp: ENST00000568632.1:c.1849C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*608C>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2304C>A
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11969
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg714Arg
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

16-66944197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944197
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944197
    reference: chr 16
allele count: 3
allele frequency: 2.542803865061875e-5
allele num: 117980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2067G>A
  hgvsp: ENST00000394055.3:c.2067G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*601G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1842G>A
  hgvsp: ENST00000568632.1:c.1842G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2016G>A
  hgvsp: ENST00000565796.1:c.2016G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2133G>A
  hgvsp: ENST00000299752.4:c.2133G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2297G>A
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1893G>A
  hgvsp: ENST00000570262.1:c.1893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4738
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr711Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

16-66944198-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66944198
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 66944198
    reference: chr 16
allele count: 1
allele frequency: 8.458233244239943e-6
allele num: 118228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000454784
  ensembl transcript: ENST00000565796
  gene symbol: CDH16
  hgvsc: ENST00000565796.1:c.2015C>T
  hgvsp: ENSP00000454784.1:p.Thr672Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000377619
  ensembl transcript: ENST00000394055
  gene symbol: CDH16
  hgvsc: ENST00000394055.3:c.2066C>T
  hgvsp: ENSP00000377619.3:p.Thr689Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455263
  ensembl transcript: ENST00000568632
  gene symbol: CDH16
  hgvsc: ENST00000568632.1:c.1841C>T
  hgvsp: ENSP00000455263.1:p.Thr614Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000455523
  ensembl transcript: ENST00000567269
  gene symbol: CDH16
  hgvsc: ENST00000567269.1:c.*2296C>T
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456690
  ensembl transcript: ENST00000570262
  gene symbol: CDH16
  hgvsc: ENST00000570262.1:c.1892C>T
  hgvsp: ENSP00000456690.1:p.Thr631Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000299752
  ensembl transcript: ENST00000299752
  gene symbol: CDH16
  hgvsc: ENST00000299752.4:c.2132C>T
  hgvsp: ENSP00000299752.4:p.Thr711Met
  variant of: http://identifiers.org/hgnc/1755
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000166589
  ensembl protein: ENSP00000456891
  ensembl transcript: ENST00000568698
  gene symbol: CDH16
  hgvsc: ENST00000568698.1:c.*600C>T
  variant of: http://identifiers.org/hgnc/1755
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr711Met
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 1647
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24875
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 396
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3526
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4032
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64236
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.721e0

DP
type: SiteQuality
SIO_000300: 2.358995e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
SIO_000300: -1.35e0

FS
type: SiteQuality
SIO_000300: 2.079e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
all individuals: 669
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24873
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3526
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556565593674117e-5
allele num: 64244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.098e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 2.359199e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 1.7396e1

VQSLOD
type: SiteQuality
SIO_000300: -2.476e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

GenotypeQuality
all individuals: 2003
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3998
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24872
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8472
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3525
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.946290033817386e-5
allele num: 10054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.359978e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.413e0

VQSLOD
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.606e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

GenotypeQuality
all individuals: 370
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24872
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4822
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8472
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4029
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556517137253681e-5
allele num: 64246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.413e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.359978e6

VQSLOD
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 1.606e1

GenotypeQuality
all individuals: 8503
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24887
bin: 9.75e1
variant carriers: 136

GenotypeQuality
all individuals: 2318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3993
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.66824349558073e-5
allele num: 64264
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.25e-3
allele num: 800
num of homozygotes: 0

African
type: Population
allele count: 126
allele frequency: 1.23046875e-2
allele num: 10240
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.481288076588338e-4
allele num: 11490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.977848101265823e-4
allele num: 10112
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e0

QD
type: SiteQuality
SIO_000300: 1.33e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 1.026e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 2.361904e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.93e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 24887
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3993
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.25e-3
allele num: 800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64264
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.33e1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.93e0

DP
type: SiteQuality
SIO_000300: 2.361904e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 1.026e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

GenotypeQuality
all individuals: 2585
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8654
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4046
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24811
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.110226424483703e-5
allele num: 64304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 4.193e0

DP
type: SiteQuality
SIO_000300: 2.358845e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

QD
type: SiteQuality
SIO_000300: 1.39e1

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24811
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4015
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3535
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2591
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.658240427315922e-5
allele num: 64402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.465e0

VQSLOD
type: SiteQuality
SIO_000300: -1.154e0

QD
type: SiteQuality
SIO_000300: 1.433e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: -2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.585e0

DP
type: SiteQuality
SIO_000300: 2.362555e6

GenotypeQuality
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2597
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5485149741398e-5
allele num: 64578
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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DP
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 7.27e-1

MQ
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SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.051e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64796
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 1.160900859066636e-4
allele num: 8614
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.97e1

BaseQRankSum
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DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.714396735962697e-5
allele num: 10294
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Other
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allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65030
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.77e-1

VQSLOD
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BaseQRankSum
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MQ
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SIO_000300: 5.972e1

DP
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MQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.8e-2

QD
type: SiteQuality
SIO_000300: 1.057e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.32e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.533319022355791e-5
allele num: 65218
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 2.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 1.565e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.98e-1

BaseQRankSum
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SIO_000300: -6.844e0

QD
type: SiteQuality
SIO_000300: 8.779999999999999e0

DP
type: SiteQuality
SIO_000300: 2.388668e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.058571647040832e-5
allele num: 65390
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -8.388e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.372e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e0

MQRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.6178e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.059e0

QD
type: SiteQuality
SIO_000300: 2.004e1

MQ
type: SiteQuality
SIO_000300: 5.852e1

DP
type: SiteQuality
SIO_000300: 2.396746e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele num: 850
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.056888698682481e-5
allele num: 65426
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: 8.34e-1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.913e1

BaseQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 13170
num of homozygotes: 0

African
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allele frequency: 9.674922600619196e-5
allele num: 10336
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65550
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

FS
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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MQ
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MQRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65884
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African
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Latino
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European (Finnish)
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South Asian
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Other
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MQ
type: SiteQuality
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10366
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Other
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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MQ
type: SiteQuality
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ClippingRankSum
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MQRankSum
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DP
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QD
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BaseQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66136
num of homozygotes: 0

East Asian
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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MQ
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QD
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
type: SiteQuality
SIO_000300: -3.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.316e0

DP
type: SiteQuality
SIO_000300: 2.424404e6

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24759
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15150
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.439e0

FS
type: SiteQuality
SIO_000300: 9.936e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.426863e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.62e0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 3547
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.52e0

MQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.814e-1

DP
type: SiteQuality
SIO_000300: 2.427605e6

QD
type: SiteQuality
SIO_000300: 1.042e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.27e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24758
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2645
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.593809441466367e-4
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.429431e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 1.836e0

VQSLOD
type: SiteQuality
SIO_000300: 6.45e-1

QD
type: SiteQuality
SIO_000300: 1.037e1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 2647
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.527345164795364e-5
allele num: 66264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.485e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.382e1

DP
type: SiteQuality
SIO_000300: 2.429772e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 2336
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 4108
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 8.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

DP
type: SiteQuality
SIO_000300: 2.4307e6

MQRankSum
type: SiteQuality
SIO_000300: -4.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

QD
type: SiteQuality
SIO_000300: 1.151e1

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 81

GenotypeQuality
all individuals: 5149
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.413127413127413e-4
allele num: 66304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.484304932735426e-3
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 61
allele frequency: 9.225650332728373e-3
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

DP
type: SiteQuality
SIO_000300: 2.436491e6

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 5156
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508204633204633e-5
allele num: 66304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.784e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e0

FS
type: SiteQuality
SIO_000300: 1.3191e1

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.616e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.427969e6

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.277e0

MQRankSum
type: SiteQuality
SIO_000300: 6.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 1.255e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.38e-1

DP
type: SiteQuality
SIO_000300: 2.428238e6

FS
type: SiteQuality
SIO_000300: 7.663e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.229e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 841
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015772490123345e-5
allele num: 66318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.25e0

FS
type: SiteQuality
SIO_000300: 6.1e-1

DP
type: SiteQuality
SIO_000300: 2.428586e6

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24719
bin: 9.75e1
variant carriers: 19

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 3550
bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 5147
bin: 6.75e1
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GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2658
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.288992008249549e-3
allele num: 15516
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66318
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 9.0e-4

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

FS
type: SiteQuality
SIO_000300: 6.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
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SIO_000300: 1.404e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

BaseQRankSum
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SIO_000300: 2.62e0

VQSLOD
type: SiteQuality
SIO_000300: 4.25e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

Latino
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allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15520
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50779530170984e-5
allele num: 66322
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

FS
type: SiteQuality
SIO_000300: 6.43e-1

BaseQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.63e-1

DP
type: SiteQuality
SIO_000300: 2.427735e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66290
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: -1.772e0

MQRankSum
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FS
type: SiteQuality
SIO_000300: 1.079e0

QD
type: SiteQuality
SIO_000300: 1.02e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
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SIO_000300: 2.425285e6

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.668e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
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allele frequency: 6.498570314530803e-5
allele num: 15388
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10386
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.269e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.426e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

QD
type: SiteQuality
SIO_000300: 6.37e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.018867924528302e-5
allele num: 66250
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15352
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.422643e6

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 1.135e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.35e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 14882
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.513225591671206e-5
allele num: 66084
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

QD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.65e-1

ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66074
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10374
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
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QD
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BaseQRankSum
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MQ
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ReadPosRankSum
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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FS
type: SiteQuality
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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BaseQRankSum
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DP
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QD
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Latino
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allele num: 11536
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Other
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East Asian
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allele frequency: 0.0e0
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South Asian
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 2.386428e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.224e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 5.221e0

QD
type: SiteQuality
SIO_000300: 1.12e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.31e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13910
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.656237929702588e-5
allele num: 10356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 2.386428e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.23e0

QD
type: SiteQuality
SIO_000300: 1.12e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.224e0

FS
type: SiteQuality
SIO_000300: 5.221e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4943
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525413387027885e-5
allele num: 65556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.376718e6

MQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-2

FS
type: SiteQuality
SIO_000300: 3.634e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.188e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.900000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.698e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-3

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525553012967201e-5
allele num: 65550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

DP
type: SiteQuality
SIO_000300: 2.376527e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

QD
type: SiteQuality
SIO_000300: 1.899e1

VQSLOD
type: SiteQuality
SIO_000300: -7.688e-1

FS
type: SiteQuality
SIO_000300: 3.661e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 4021
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.28e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 3.69e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: -6.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

DP
type: SiteQuality
SIO_000300: 2.37068e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.446e0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 668
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variant carriers: 0

GenotypeQuality
all individuals: 3543
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531205977828137e-5
allele num: 65308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 2.364347e6

FS
type: SiteQuality
SIO_000300: 3.379e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.294e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65254
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.76156473144986e-5
allele num: 12884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.13e-1

QD
type: SiteQuality
SIO_000300: 1.831e1

FS
type: SiteQuality
SIO_000300: 3.029e0

DP
type: SiteQuality
SIO_000300: 2.363982e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53888769197624e-5
allele num: 64982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.429e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 2.336049e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544783266907653e-5
allele num: 64734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11842
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.64e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.68e-1

DP
type: SiteQuality
SIO_000300: 2.31511e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.39e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64734
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.39e-1

DP
type: SiteQuality
SIO_000300: 2.31511e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3323
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4534
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557050323866467e-5
allele num: 64224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 9.1e0

MQ
type: SiteQuality
SIO_000300: 5.808e1

DP
type: SiteQuality
SIO_000300: 2.125071e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

FS
type: SiteQuality
SIO_000300: 1.165e0

GenotypeQuality
all individuals: 3548
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 9175
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 29

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5522
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.763718023823472e-5
allele num: 10242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.029690971520905e-4
allele num: 9902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.109356052361556e-4
allele num: 64322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.357678229039568e-4
allele num: 11474
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.955e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.78e0

QD
type: SiteQuality
SIO_000300: 1.369e1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

DP
type: SiteQuality
SIO_000300: 2.132523e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3413
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 20243
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 7.5e0
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GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4146
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554919766140067e-5
allele num: 64312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.133226e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.32e-1

QD
type: SiteQuality
SIO_000300: 1.262e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4200
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 422
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5606
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20277
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2674
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
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variant carriers: 1

GenotypeQuality
all individuals: 426
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3569
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553711817532084e-5
allele num: 64362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.999200159968006e-4
allele num: 10002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

DP
type: SiteQuality
SIO_000300: 2.140272e6

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
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variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3572
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20275
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553760099440646e-5
allele num: 64360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.183e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

QD
type: SiteQuality
SIO_000300: 1.451e1

DP
type: SiteQuality
SIO_000300: 2.141124e6

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.899e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.889e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

FS
type: SiteQuality
SIO_000300: 1.4896e1

GenotypeQuality
all individuals: 1226
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4204
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20283
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4665
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.107423635064168e-5
allele num: 64362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.142895e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: -3.003e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.341e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-1

FS
type: SiteQuality
SIO_000300: 2.442e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.335e0

GenotypeQuality
all individuals: 4213
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9850
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20293
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5623
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.657661853749418e-5
allele num: 64410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.77e-1

QD
type: SiteQuality
SIO_000300: 1.39e1

FS
type: SiteQuality
SIO_000300: 2.469e0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.24e-1

DP
type: SiteQuality
SIO_000300: 2.145175e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 181
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5655
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
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GenotypeQuality
all individuals: 4235
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variant carriers: 0

GenotypeQuality
all individuals: 4696
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.761323771382447e-5
allele num: 64422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.173e0

VQSLOD
type: SiteQuality
SIO_000300: 2.76e0

FS
type: SiteQuality
SIO_000300: 6.16e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e-1

DP
type: SiteQuality
SIO_000300: 2.14852e6

GenotypeQuality
all individuals: 416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4718
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5665
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10061
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2697
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.517450682852807e-4
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.209e0

DP
type: SiteQuality
SIO_000300: 2.151918e6

FS
type: SiteQuality
SIO_000300: 5.251e0

VQSLOD
type: SiteQuality
SIO_000300: -2.224e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.725e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.422e0

QD
type: SiteQuality
SIO_000300: 1.942e1

GenotypeQuality
all individuals: 272
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 7.5e0
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GenotypeQuality
all individuals: 5662
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3171
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4722
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
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variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550628004341758e-5
allele num: 64490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.097e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.766e0

QD
type: SiteQuality
SIO_000300: 1.417e1

VQSLOD
type: SiteQuality
SIO_000300: -5.786e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e0

DP
type: SiteQuality
SIO_000300: 2.152647e6

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20306
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 399
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10442
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.63e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

QD
type: SiteQuality
SIO_000300: 1.289e1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

DP
type: SiteQuality
SIO_000300: 2.154089e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.476e0

GenotypeQuality
all individuals: 5677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3598
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20311
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549186676994578e-5
allele num: 64550
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.155207e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-1

FS
type: SiteQuality
SIO_000300: 1.447e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.009e1

QD
type: SiteQuality
SIO_000300: 1.033e1

GenotypeQuality
all individuals: 400
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20315
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 257
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4730
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5673
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73973556019485e-4
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.156016e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.108e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

FS
type: SiteQuality
SIO_000300: 6.052e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.746e0

GenotypeQuality
all individuals: 4250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5727
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20335
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3544
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10489
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4732
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.87e0

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.16758e6

VQSLOD
type: SiteQuality
SIO_000300: -2.234e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.073e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.191e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
all individuals: 248
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10553
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20335
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2715
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5727
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64952
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.939487975174554e-4
allele num: 10312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.227e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 6.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 1.328e1

FS
type: SiteQuality
SIO_000300: 2.456e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 2.169633e6

GenotypeQuality
all individuals: 4252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20337
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 261
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5736
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10764
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 2.172196e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.64e0

QD
type: SiteQuality
SIO_000300: 2.739e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.335e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20337
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5754
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4737
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536334306345061e-5
allele num: 65090
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.041e0

DP
type: SiteQuality
SIO_000300: 2.174631e6

QD
type: SiteQuality
SIO_000300: 1.518e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.012e0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.342e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

GenotypeQuality
all individuals: 242
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2682
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20838
bin: 9.75e1
variant carriers: 939

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3540
bin: 9.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 6.053268765133172e-3
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 47
allele frequency: 4.077029840388619e-3
allele num: 11528
num of homozygotes: 1

African
type: Population
allele count: 917
allele frequency: 8.885658914728682e-2
allele num: 10320
num of homozygotes: 44

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.84331797235023e-4
allele num: 65100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.14112970018221e-4
allele num: 12074
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

DP
type: SiteQuality
SIO_000300: 2.213431e6

QD
type: SiteQuality
SIO_000300: 1.314e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.94e-2

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

GenotypeQuality
all individuals: 20317
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 5779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 87
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variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 3.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.93601525923357e-4
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534118802160039e-5
allele num: 65184
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

FS
type: SiteQuality
SIO_000300: 5.387e0

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

DP
type: SiteQuality
SIO_000300: 2.182872e6

QD
type: SiteQuality
SIO_000300: 1.285e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20317
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4729
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.387e0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

QD
type: SiteQuality
SIO_000300: 1.285e1

DP
type: SiteQuality
SIO_000300: 2.182872e6

GenotypeQuality
all individuals: 185
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3593
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4728
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11339
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5797
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4256
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.085e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

DP
type: SiteQuality
SIO_000300: 2.185661e6

QD
type: SiteQuality
SIO_000300: 1.258e1

VQSLOD
type: SiteQuality
SIO_000300: 5.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.005e0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4729
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20317
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 3593
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11627
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.070270931441502e-4
allele num: 65404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13064
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.34192037470726e-3
allele num: 854
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.406e1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.19e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

DP
type: SiteQuality
SIO_000300: 2.193397e6

GenotypeQuality
all individuals: 126
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4740
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.054181174027243e-5
allele num: 65484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13394
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.97e-1

FS
type: SiteQuality
SIO_000300: 2.794e0

DP
type: SiteQuality
SIO_000300: 2.196809e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.268e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.234e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.99e-1

GenotypeQuality
all individuals: 5851
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20307
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3595
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527090587013621e-5
allele num: 65484
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.268e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQRankSum
type: SiteQuality
SIO_000300: -1.97e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.99e-1

FS
type: SiteQuality
SIO_000300: 2.794e0

DP
type: SiteQuality
SIO_000300: 2.196809e6

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20307
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3594
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5876
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520681265206813e-5
allele num: 65760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

DP
type: SiteQuality
SIO_000300: 2.208737e6

FS
type: SiteQuality
SIO_000300: 3.543e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

VQSLOD
type: SiteQuality
SIO_000300: 2.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0