11-72145307-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145307
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145307
    reference: chr 11
allele count: 33
allele frequency: 2.796136248093543e-4
allele num: 118020
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-31G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.212G>C
  hgvsp: ENSP00000294053.3:p.Gly71Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.212G>C
  hgvsp: ENSP00000441518.1:p.Gly71Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.212G>C
  hgvsp: ENSP00000440423.1:p.Gly71Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-177G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.212G>C
  hgvsp: ENSP00000340385.5:p.Gly71Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.120G>C
  hgvsp: ENST00000535990.1:c.120G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+121G>C
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10030
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14024
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9197
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly71Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

11-72145308-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145308
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145308
    reference: chr 11
allele count: 1
allele frequency: 8.474001762592366e-6
allele num: 118008
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.211G>A
  hgvsp: ENSP00000294053.3:p.Gly71Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-178G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.211G>A
  hgvsp: ENSP00000340385.5:p.Gly71Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.119G>A
  hgvsp: ENSP00000443822.1:p.Arg40Gln
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+120G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-32G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.211G>A
  hgvsp: ENSP00000441518.1:p.Gly71Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.211G>A
  hgvsp: ENSP00000440423.1:p.Gly71Arg
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10076
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly71Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

11-72145309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145309
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145309
    reference: chr 11
allele count: 1
allele frequency: 8.473570932262274e-6
allele num: 118014
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.210C>T
  hgvsp: ENST00000294053.3:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.118C>T
  hgvsp: ENSP00000443822.1:p.Arg40Trp
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.210C>T
  hgvsp: ENST00000538039.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.210C>T
  hgvsp: ENST00000340729.5:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-33C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+119C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-179C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.210C>T
  hgvsp: ENST00000535477.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4565
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg40Trp
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

11-72145312-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145312
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145312
    reference: chr 11
allele count: 1
allele frequency: 8.471130387638926e-6
allele num: 118048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-36C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.207C>T
  hgvsp: ENST00000538039.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-182C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.207C>T
  hgvsp: ENST00000340729.5:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.207C>T
  hgvsp: ENST00000535477.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.115C>T
  hgvsp: ENSP00000443822.1:p.His39Tyr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+116C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.207C>T
  hgvsp: ENST00000294053.3:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9208
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His39Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

11-72145316-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145316
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145316
    reference: chr 11
allele count: 1
allele frequency: 8.473858147614609e-6
allele num: 118010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.203C>T
  hgvsp: ENSP00000440423.1:p.Ala68Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.203C>T
  hgvsp: ENSP00000441518.1:p.Ala68Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-40C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.111C>T
  hgvsp: ENST00000535990.1:c.111C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.203C>T
  hgvsp: ENSP00000340385.5:p.Ala68Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-186C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.203C>T
  hgvsp: ENSP00000294053.3:p.Ala68Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+112C>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala68Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

11-72145317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145317
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145317
    reference: chr 11
allele count: 1
allele frequency: 8.472852979055108e-6
allele num: 118024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.202G>A
  hgvsp: ENSP00000440423.1:p.Ala68Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-41G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.110G>A
  hgvsp: ENSP00000443822.1:p.Gly37Asp
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.202G>A
  hgvsp: ENSP00000340385.5:p.Ala68Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.202G>A
  hgvsp: ENSP00000441518.1:p.Ala68Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+111G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-187G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.202G>A
  hgvsp: ENSP00000294053.3:p.Ala68Thr
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala68Thr
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-72145319-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145319
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145319
    reference: chr 11
allele count: 1
allele frequency: 8.472565831836514e-6
allele num: 118028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.108G>A
  hgvsp: ENSP00000443822.1:p.Trp36Ter
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.200G>A
  hgvsp: ENSP00000441518.1:p.Gly67Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+109G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.200G>A
  hgvsp: ENSP00000294053.3:p.Gly67Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.200G>A
  hgvsp: ENSP00000340385.5:p.Gly67Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.200G>A
  hgvsp: ENSP00000440423.1:p.Gly67Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-43G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-189G>A
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28914
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Trp36Ter
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

11-72145330-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145330
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145330
    reference: chr 11
allele count: 1
allele frequency: 8.472852979055108e-6
allele num: 118024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-54C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.189C>T
  hgvsp: ENST00000294053.3:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.97C>T
  hgvsp: ENSP00000443822.1:p.Leu33Phe
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.189C>T
  hgvsp: ENST00000538039.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-200C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.189C>T
  hgvsp: ENST00000535477.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+98C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.189C>T
  hgvsp: ENST00000340729.5:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu33Phe
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

11-72145330-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145330
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145330
    reference: chr 11
allele count: 10
allele frequency: 8.472852979055108e-5
allele num: 118024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+98C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-200C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-54C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.189C>G
  hgvsp: ENSP00000441518.1:p.Phe63Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.189C>G
  hgvsp: ENSP00000294053.3:p.Phe63Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.189C>G
  hgvsp: ENSP00000340385.5:p.Phe63Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.97C>G
  hgvsp: ENSP00000443822.1:p.Leu33Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.189C>G
  hgvsp: ENSP00000440423.1:p.Phe63Leu
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10183
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13905
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe63Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-72145331-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145331
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145331
    reference: chr 11
allele count: 1
allele frequency: 8.471273910170611e-6
allele num: 118046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.188T>G
  hgvsp: ENSP00000440423.1:p.Phe63Cys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-55T>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.96T>G
  hgvsp: ENST00000535990.1:c.96T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.188T>G
  hgvsp: ENSP00000294053.3:p.Phe63Cys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.188T>G
  hgvsp: ENSP00000441518.1:p.Phe63Cys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-201T>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.188T>G
  hgvsp: ENSP00000340385.5:p.Phe63Cys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+97T>G
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29034
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9136
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe63Cys
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: A
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

11-72145336-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145336
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145336
    reference: chr 11
allele count: 1
allele frequency: 8.471130387638926e-6
allele num: 118048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-60C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+92C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.91C>G
  hgvsp: ENSP00000443822.1:p.Leu31Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.183C>G
  hgvsp: ENST00000535477.1:c.183C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.183C>G
  hgvsp: ENST00000294053.3:c.183C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-206C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.183C>G
  hgvsp: ENST00000340729.5:c.183C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.183C>G
  hgvsp: ENST00000538039.1:c.183C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28861
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu31Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

11-72145337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145337
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145337
    reference: chr 11
allele count: 1
allele frequency: 8.47314014573801e-6
allele num: 118020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.182C>T
  hgvsp: ENSP00000441518.1:p.Ala61Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.182C>T
  hgvsp: ENSP00000294053.3:p.Ala61Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.182C>T
  hgvsp: ENSP00000440423.1:p.Ala61Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-207C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.90C>T
  hgvsp: ENST00000535990.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-61C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.182C>T
  hgvsp: ENSP00000340385.5:p.Ala61Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+91C>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4341
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala61Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

11-72145340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145340
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145340
    reference: chr 11
allele count: 1
allele frequency: 8.471560969824299e-6
allele num: 118042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.179C>T
  hgvsp: ENSP00000340385.5:p.Pro60Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+88C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.87C>T
  hgvsp: ENST00000535990.1:c.87C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.179C>T
  hgvsp: ENSP00000441518.1:p.Pro60Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.179C>T
  hgvsp: ENSP00000440423.1:p.Pro60Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-64C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.179C>T
  hgvsp: ENSP00000294053.3:p.Pro60Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-210C>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4535
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro60Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

11-72145343-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145343
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145343
    reference: chr 11
allele count: 1
allele frequency: 8.472565831836514e-6
allele num: 118028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.176C>T
  hgvsp: ENSP00000440423.1:p.Ser59Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+85C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-67C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.84C>T
  hgvsp: ENST00000535990.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.176C>T
  hgvsp: ENSP00000294053.3:p.Ser59Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.176C>T
  hgvsp: ENSP00000340385.5:p.Ser59Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.176C>T
  hgvsp: ENSP00000441518.1:p.Ser59Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-213C>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser59Leu
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

11-72145356-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145356
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145357
    reference: chr 11
allele count: 5
allele frequency: 4.247799639786591e-5
allele num: 117708
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+71dupG
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-81dupG
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.162dupG
  hgvsp: ENSP00000294053.3:p.Arg55AlafsTer138
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.162dupG
  hgvsp: ENSP00000340385.5:p.Arg55AlafsTer109
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.162dupG
  hgvsp: ENSP00000440423.1:p.Arg55AlafsTer138
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-227dupG
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.70dupG
  hgvsp: ENSP00000443822.1:p.Ala24GlyfsTer106
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.162dupG
  hgvsp: ENSP00000441518.1:p.Arg55AlafsTer138
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21995
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5639
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1821
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg55AlafsTer138
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

11-72145356-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145356
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145355
    reference: chr 11
allele count: 1
allele frequency: 8.495599279573181e-6
allele num: 117708
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-227delG
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.162delG
  hgvsp: ENSP00000340385.5:p.Arg55AlafsTer134
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-81delG
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+71delG
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.162delG
  hgvsp: ENSP00000440423.1:p.Arg55AlafsTer163
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.162delG
  hgvsp: ENSP00000294053.3:p.Arg55AlafsTer186
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.70delG
  hgvsp: ENSP00000443822.1:p.Ala24ArgfsTer115
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.162delG
  hgvsp: ENSP00000441518.1:p.Arg55AlafsTer163
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8945
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4520
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg55AlafsTer186
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: GC
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

11-72145357-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145357
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145357
    reference: chr 11
allele count: 1
allele frequency: 8.494300324482272e-6
allele num: 117726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.162G>A
  hgvsp: ENST00000535477.1:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-227G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.162G>A
  hgvsp: ENST00000340729.5:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.162G>A
  hgvsp: ENST00000294053.3:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-81G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.70G>A
  hgvsp: ENSP00000443822.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+71G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.162G>A
  hgvsp: ENST00000538039.1:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3365
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala24Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

11-72145360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145360
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145360
    reference: chr 11
allele count: 13
allele frequency: 1.102087183573814e-4
allele num: 117958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.159G>A
  hgvsp: ENST00000535477.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-84G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.159G>A
  hgvsp: ENST00000340729.5:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-230G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.159G>A
  hgvsp: ENST00000294053.3:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.159G>A
  hgvsp: ENST00000538039.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.67G>A
  hgvsp: ENSP00000443822.1:p.Gly23Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+68G>A
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10220
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22131
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13764
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly23Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

11-72145367-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145367
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145367
    reference: chr 11
allele count: 1
allele frequency: 8.475438180153914e-6
allele num: 117988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.152C>T
  hgvsp: ENSP00000440423.1:p.Ala51Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.152C>T
  hgvsp: ENSP00000441518.1:p.Ala51Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.60C>T
  hgvsp: ENST00000535990.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-237C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.152C>T
  hgvsp: ENSP00000294053.3:p.Ala51Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.152C>T
  hgvsp: ENSP00000340385.5:p.Ala51Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-91C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+61C>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala51Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

11-72145372-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145372
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145372
    reference: chr 11
allele count: 1
allele frequency: 8.460809530255856e-6
allele num: 118192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.147G>A
  hgvsp: ENST00000538039.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+56G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-96G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-242G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.55G>A
  hgvsp: ENSP00000443822.1:p.Gly19Ser
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.147G>A
  hgvsp: ENST00000535477.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.147G>A
  hgvsp: ENST00000340729.5:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.147G>A
  hgvsp: ENST00000294053.3:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8989
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4504
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly19Ser
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-72145375-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145375
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145375
    reference: chr 11
allele count: 31
allele frequency: 2.62280657224563e-4
allele num: 118194
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.144G>A
  hgvsp: ENST00000294053.3:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-245G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.144G>A
  hgvsp: ENST00000340729.5:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.144G>A
  hgvsp: ENST00000535477.1:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.52G>A
  hgvsp: ENSP00000443822.1:p.Glu18Lys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.144G>A
  hgvsp: ENST00000538039.1:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-99G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+53G>A
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22325
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13716
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3078
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu18Lys
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/11-72145384-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145384
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145384
    reference: chr 11
allele count: 46
allele frequency: 3.890655660058191e-4
allele num: 118232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.43G>T
  hgvsp: ENSP00000443822.1:p.Ala15Ser
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-254G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-108G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.135G>T
  hgvsp: ENST00000538039.1:c.135G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.135G>T
  hgvsp: ENST00000294053.3:c.135G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+44G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.135G>T
  hgvsp: ENST00000535477.1:c.135G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.135G>T
  hgvsp: ENST00000340729.5:c.135G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 22388
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13760
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 28862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3332
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala15Ser
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

11-72145388-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145388
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145388
    reference: chr 11
allele count: 1
allele frequency: 8.446516656530846e-6
allele num: 118392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.131A>G
  hgvsp: ENSP00000440423.1:p.Glu44Gly
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.131A>G
  hgvsp: ENSP00000441518.1:p.Glu44Gly
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.39A>G
  hgvsp: ENST00000535990.1:c.39A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.131A>G
  hgvsp: ENSP00000294053.3:p.Glu44Gly
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-258A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+40A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-112A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.131A>G
  hgvsp: ENSP00000340385.5:p.Glu44Gly
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28940
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu44Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

11-72145388-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145388
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145388
    reference: chr 11
allele count: 21
allele frequency: 1.773768497871478e-4
allele num: 118392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.131A>C
  hgvsp: ENSP00000440423.1:p.Glu44Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.131A>C
  hgvsp: ENSP00000441518.1:p.Glu44Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+40A>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.39A>C
  hgvsp: ENST00000535990.1:c.39A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-258A>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.131A>C
  hgvsp: ENSP00000294053.3:p.Glu44Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.131A>C
  hgvsp: ENSP00000340385.5:p.Glu44Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-112A>C
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13713
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10470
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu44Ala
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

11-72145389-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145389
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145389
    reference: chr 11
allele count: 19
allele frequency: 1.603944013912104e-4
allele num: 118458
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.130G>A
  hgvsp: ENSP00000441518.1:p.Glu44Lys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.130G>A
  hgvsp: ENSP00000440423.1:p.Glu44Lys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.130G>A
  hgvsp: ENSP00000294053.3:p.Glu44Lys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-259G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-113G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.38G>A
  hgvsp: ENSP00000443822.1:p.Gly13Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+39G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.130G>A
  hgvsp: ENSP00000340385.5:p.Glu44Lys
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13698
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10539
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4257
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu44Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

11-72145390-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145390
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145390
    reference: chr 11
allele count: 1
allele frequency: 8.43981567442567e-6
allele num: 118486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.37G>C
  hgvsp: ENSP00000443822.1:p.Gly13Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.129G>C
  hgvsp: ENST00000535477.1:c.129G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.129G>C
  hgvsp: ENST00000538039.1:c.129G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.129G>C
  hgvsp: ENST00000340729.5:c.129G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-114G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.129G>C
  hgvsp: ENST00000294053.3:c.129G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-260G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+38G>C
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22532
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29558
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly13Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-72145399-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145399
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145399
    reference: chr 11
allele count: 1
allele frequency: 8.410428931875526e-6
allele num: 118900
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.120G>T
  hgvsp: ENST00000294053.3:c.120G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.28G>T
  hgvsp: ENSP00000443822.1:p.Glu10Ter
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.120G>T
  hgvsp: ENST00000535477.1:c.120G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-269G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+29G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.120G>T
  hgvsp: ENST00000340729.5:c.120G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.120G>T
  hgvsp: ENST00000538039.1:c.120G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-123G>T
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu10Ter
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum

11-72145404-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145404
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145404
    reference: chr 11
allele count: 1
allele frequency: 8.401102224611869e-6
allele num: 119032
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.23A>G
  hgvsp: ENSP00000443822.1:p.Tyr8Cys
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.115A>G
  hgvsp: ENSP00000294053.3:p.Thr39Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.115A>G
  hgvsp: ENSP00000441518.1:p.Thr39Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+24A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-274A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-128A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.115A>G
  hgvsp: ENSP00000440423.1:p.Thr39Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.115A>G
  hgvsp: ENSP00000340385.5:p.Thr39Ala
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3345
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr39Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP

11-72145410-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145410
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145410
    reference: chr 11
allele count: 1
allele frequency: 8.39785686692756e-6
allele num: 119078
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.109G>C
  hgvsp: ENSP00000340385.5:p.Val37Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-134G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.109G>C
  hgvsp: ENSP00000440423.1:p.Val37Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+18G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.17G>C
  hgvsp: ENSP00000443822.1:p.Cys6Ser
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.109G>C
  hgvsp: ENSP00000294053.3:p.Val37Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.109G>C
  hgvsp: ENSP00000441518.1:p.Val37Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-280G>C
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val37Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

11-72145410-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145410
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145410
    reference: chr 11
allele count: 1
allele frequency: 8.39785686692756e-6
allele num: 119078
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.109G>A
  hgvsp: ENSP00000440423.1:p.Val37Met
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+18G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-280G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.109G>A
  hgvsp: ENSP00000441518.1:p.Val37Met
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.109G>A
  hgvsp: ENSP00000340385.5:p.Val37Met
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-134G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.17G>A
  hgvsp: ENSP00000443822.1:p.Cys6Tyr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.109G>A
  hgvsp: ENSP00000294053.3:p.Val37Met
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val37Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

11-72145422-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145422
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145422
    reference: chr 11
allele count: 1
allele frequency: 8.409297319116015e-6
allele num: 118916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000407296
  ensembl transcript: ENST00000437826
  gene symbol: CLPB
  hgvsc: ENST00000437826.2:c.-146T>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-292T>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000443822
  ensembl transcript: ENST00000535990
  gene symbol: CLPB
  hgvsc: ENST00000535990.1:c.5T>A
  hgvsp: ENSP00000443822.1:p.Phe2Tyr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.97T>A
  hgvsp: ENSP00000440423.1:p.Ser33Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.97T>A
  hgvsp: ENSP00000441518.1:p.Ser33Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.97T>A
  hgvsp: ENSP00000294053.3:p.Ser33Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.97T>A
  hgvsp: ENSP00000340385.5:p.Ser33Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+6T>A
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13685
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30354
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser33Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/11-72145427-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145427
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145427
    reference: chr 11
allele count: 1
allele frequency: 8.43198758811427e-6
allele num: 118596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.92G>T
  hgvsp: ENSP00000440423.1:p.Gly31Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-297G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.92G>T
  hgvsp: ENSP00000340385.5:p.Gly31Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.92G>T
  hgvsp: ENSP00000441518.1:p.Gly31Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.91+1G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.92G>T
  hgvsp: ENSP00000294053.3:p.Gly31Val
  variant of: http://identifiers.org/hgnc/30664
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.75e1
  variant carriers: 0
hgvs: c.91+1G>T
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

11-72145446-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145446
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145446
    reference: chr 11
allele count: 2
allele frequency: 1.708116971850232e-5
allele num: 117088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-316A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.73A>G
  hgvsp: ENSP00000294053.3:p.Thr25Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.73A>G
  hgvsp: ENSP00000473985.1:p.Thr25Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.73A>G
  hgvsp: ENSP00000441518.1:p.Thr25Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.73A>G
  hgvsp: ENSP00000340385.5:p.Thr25Ala
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.73A>G
  hgvsp: ENSP00000440423.1:p.Thr25Ala
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4422
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr25Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum

11-72145453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145453
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145453
    reference: chr 11
allele count: 1
allele frequency: 8.610446193321739e-6
allele num: 116138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.66G>A
  hgvsp: ENST00000535477.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-323G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.66G>A
  hgvsp: ENST00000294053.3:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.66G>A
  hgvsp: ENST00000445069.2:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.66G>A
  hgvsp: ENST00000538039.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.66G>A
  hgvsp: ENST00000340729.5:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27824
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3789
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg22Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

11-72145461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145461
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145461
    reference: chr 11
allele count: 2
allele frequency: 1.733522865166592e-5
allele num: 115372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.58C>T
  hgvsp: ENST00000445069.2:c.58C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.58C>T
  hgvsp: ENST00000294053.3:c.58C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.58C>T
  hgvsp: ENST00000538039.1:c.58C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.58C>T
  hgvsp: ENST00000340729.5:c.58C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-331C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.58C>T
  hgvsp: ENST00000535477.1:c.58C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4421
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4144
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27546
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu20Leu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

11-72145468-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145468
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145468
    reference: chr 11
allele count: 1
allele frequency: 8.747375787263821e-6
allele num: 114320
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.51C>T
  hgvsp: ENST00000445069.2:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.51C>T
  hgvsp: ENST00000538039.1:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.51C>T
  hgvsp: ENST00000340729.5:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-338C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.51C>T
  hgvsp: ENST00000535477.1:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.51C>T
  hgvsp: ENST00000294053.3:c.51C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4153
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu17Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

11-72145468-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145468
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145468
    reference: chr 11
allele count: 222
allele frequency: 1.941917424772568e-3
allele num: 114320
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.51C>A
  hgvsp: ENST00000294053.3:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.51C>A
  hgvsp: ENST00000340729.5:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.51C>A
  hgvsp: ENST00000445069.2:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.51C>A
  hgvsp: ENST00000538039.1:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.51C>A
  hgvsp: ENST00000535477.1:c.51C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-338C>A
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13640
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 1.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 22050
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8257
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8742
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4153
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu17Leu
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/11-72145469-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145469
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145469
    reference: chr 11
allele count: 1
allele frequency: 8.752122389679497e-6
allele num: 114258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.50T>G
  hgvsp: ENSP00000473985.1:p.Leu17Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.50T>G
  hgvsp: ENSP00000440423.1:p.Leu17Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-339T>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.50T>G
  hgvsp: ENSP00000294053.3:p.Leu17Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.50T>G
  hgvsp: ENSP00000441518.1:p.Leu17Arg
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.50T>G
  hgvsp: ENSP00000340385.5:p.Leu17Arg
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3069
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu17Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/11-72145475-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145475
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145475
    reference: chr 11
allele count: 1
allele frequency: 8.814455707360071e-6
allele num: 113450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.44G>T
  hgvsp: ENSP00000441518.1:p.Arg15Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.44G>T
  hgvsp: ENSP00000294053.3:p.Arg15Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.44G>T
  hgvsp: ENSP00000340385.5:p.Arg15Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.44G>T
  hgvsp: ENSP00000440423.1:p.Arg15Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.44G>T
  hgvsp: ENSP00000473985.1:p.Arg15Leu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-345G>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27411
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4136
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg15Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

11-72145480-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145480
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145480
    reference: chr 11
allele count: 5
allele frequency: 4.436872182586164e-5
allele num: 112692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.39G>A
  hgvsp: ENST00000538039.1:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-350G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.39G>A
  hgvsp: ENST00000340729.5:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.39G>A
  hgvsp: ENST00000535477.1:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.39G>A
  hgvsp: ENST00000294053.3:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.39G>A
  hgvsp: ENST00000445069.2:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27397
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3979
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8766
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3073
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Ala13Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

11-72145481-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145481
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145481
    reference: chr 11
allele count: 1
allele frequency: 8.880521464220379e-6
allele num: 112606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-351C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.38C>T
  hgvsp: ENSP00000340385.5:p.Ala13Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.38C>T
  hgvsp: ENSP00000441518.1:p.Ala13Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.38C>T
  hgvsp: ENSP00000294053.3:p.Ala13Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.38C>T
  hgvsp: ENSP00000440423.1:p.Ala13Val
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.38C>T
  hgvsp: ENSP00000473985.1:p.Ala13Val
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3300
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4327
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala13Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD

11-72145488-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145488
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145488
    reference: chr 11
allele count: 1
allele frequency: 8.949827268333721e-6
allele num: 111734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-358G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.31G>A
  hgvsp: ENSP00000473985.1:p.Ala11Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.31G>A
  hgvsp: ENSP00000441518.1:p.Ala11Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.31G>A
  hgvsp: ENSP00000440423.1:p.Ala11Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.31G>A
  hgvsp: ENSP00000294053.3:p.Ala11Thr
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.31G>A
  hgvsp: ENSP00000340385.5:p.Ala11Thr
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3296
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4325
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala11Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-72145498-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145498
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145498
    reference: chr 11
allele count: 1
allele frequency: 9.027226113959703e-6
allele num: 110776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.21G>T
  hgvsp: ENSP00000440423.1:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.21G>T
  hgvsp: ENSP00000340385.5:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.21G>T
  hgvsp: ENSP00000441518.1:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.21G>T
  hgvsp: ENSP00000473985.1:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-368G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.21G>T
  hgvsp: ENSP00000294053.3:p.Leu7Phe
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4323
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu7Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

11-72145504-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145504
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145504
    reference: chr 11
allele count: 1
allele frequency: 9.086943879034603e-6
allele num: 110048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.15G>A
  hgvsp: ENST00000535477.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.15G>A
  hgvsp: ENST00000294053.3:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.15G>A
  hgvsp: ENST00000538039.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-374G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.15G>A
  hgvsp: ENST00000340729.5:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.15G>A
  hgvsp: ENST00000445069.2:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27148
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4321
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu5Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

11-72145506-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145506
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145506
    reference: chr 11
allele count: 1
allele frequency: 9.086448470750722e-6
allele num: 110054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.13C>T
  hgvsp: ENST00000538039.1:c.13C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.13C>T
  hgvsp: ENST00000535477.1:c.13C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-376C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.13C>T
  hgvsp: ENST00000340729.5:c.13C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.13C>T
  hgvsp: ENST00000294053.3:c.13C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.13C>T
  hgvsp: ENST00000445069.2:c.13C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4321
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2961
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu5Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP

11-72145511-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145511
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145511
    reference: chr 11
allele count: 1
allele frequency: 9.108297659167501e-6
allele num: 109790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.8G>A
  hgvsp: ENSP00000441518.1:p.Gly3Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.8G>A
  hgvsp: ENSP00000440423.1:p.Gly3Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.8G>A
  hgvsp: ENSP00000473985.1:p.Gly3Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.8G>A
  hgvsp: ENSP00000340385.5:p.Gly3Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.8G>A
  hgvsp: ENSP00000294053.3:p.Gly3Glu
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-381G>A
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8687
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3278
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly3Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

11-72145522-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145522
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145522
    reference: chr 11
allele count: 1
allele frequency: 9.168087720263307e-6
allele num: 109074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-4C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-392C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-4C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-4C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3054
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4207
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26706
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8619
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4316
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

11-72145528-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145528
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145528
    reference: chr 11
allele count: 3
allele frequency: 2.758519226879011e-5
allele num: 108754
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-10A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-10A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-10A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-398A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-10A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-10A>G
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4314
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3246
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26235
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

11-72145532-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145532
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145532
    reference: chr 11
allele count: 1
allele frequency: 9.211835366078337e-6
allele num: 108556
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-14A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-14A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-402A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-14A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-14A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-14A>G
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1788
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3896
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: T
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

11-72145536-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145536
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145536
    reference: chr 11
allele count: 1
allele frequency: 9.227816329543778e-6
allele num: 108368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-18A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-18A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-18A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-18A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-18A>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-406A>G
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

11-72145538-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145538
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145538
    reference: chr 11
allele count: 1
allele frequency: 9.238728750923873e-6
allele num: 108240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-20T>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-20T>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-20T>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-20T>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-408T>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-20T>C
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5465
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4155
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8342
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24401
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

11-72145544-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145544
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145544
    reference: chr 11
allele count: 28
allele frequency: 2.590625636091116e-4
allele num: 108082
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-26A>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-26A>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-26A>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-26A>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-414A>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-26A>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12530
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19858
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4088
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23130
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4301
  bin: 9.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

11-72145546-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145546
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145546
    reference: chr 11
allele count: 10
allele frequency: 9.25908779467047e-5
allele num: 108002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-28C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-28C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-416C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-28C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-28C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-28C>G
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19474
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3571
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3118
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4066
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

11-72145548-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145548
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145548
    reference: chr 11
allele count: 1
allele frequency: 9.268012382064542e-6
allele num: 107898
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-30C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-30C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-418C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-30C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-30C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-30C>G
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18597
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2234
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2967
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4266
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

11-72145549-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145549
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145549
    reference: chr 11
allele count: 2
allele frequency: 1.854427445526194e-5
allele num: 107850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-31G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-31G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-31G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-419G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-31G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-31G>C
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11793
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1766
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2262
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3421
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1766
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-72145550-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145550
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145550
    reference: chr 11
allele count: 6
allele frequency: 5.563385505526296e-5
allele num: 107848
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-32G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-32G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-32G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-420G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-32G>C
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-32G>C
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11528
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4265
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

11-72145550-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145550
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145550
    reference: chr 11
allele count: 8
allele frequency: 7.417847340701729e-5
allele num: 107848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-32G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-420G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-32G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-32G>A
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18204
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11528
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4265
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

11-72145552-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145552
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145552
    reference: chr 11
allele count: 239
allele frequency: 2.21834450240398e-3
allele num: 107738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-422C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-34C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-34C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-34C>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7044
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 3.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 11137
  bin: 3.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 4.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 17751
  bin: 2.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3274
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3885
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

11-72145553-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145553
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145553
    reference: chr 11
allele count: 1
allele frequency: 9.281603861147206e-6
allele num: 107740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-35G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000440423
  ensembl transcript: ENST00000535477
  gene symbol: CLPB
  hgvsc: ENST00000535477.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-423G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-35G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-35G>A
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-35G>A
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2228
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2908
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3884
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3252
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19292
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/11-72145555-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145555
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145555
    reference: chr 11
allele count: 6
allele frequency: 5.576104533372986e-5
allele num: 107602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-37G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-37G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-37G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-37G>T
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-425G>T
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10338
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16102
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16823
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4198
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2466
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2886
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2853
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

11-72145558-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72145558
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72145558
    reference: chr 11
allele count: 1
allele frequency: 9.300941255255032e-6
allele num: 107516
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000294053
  ensembl transcript: ENST00000294053
  gene symbol: CLPB
  hgvsc: ENST00000294053.3:c.-40C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000441518
  ensembl transcript: ENST00000538039
  gene symbol: CLPB
  hgvsc: ENST00000538039.1:c.-40C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000473985
  ensembl transcript: ENST00000445069
  gene symbol: CLPB
  hgvsc: ENST00000445069.2:c.-40C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000340385
  ensembl transcript: ENST00000340729
  gene symbol: CLPB
  hgvsc: ENST00000340729.5:c.-40C>G
  variant of: http://identifiers.org/hgnc/30664
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000162129
  ensembl protein: ENSP00000439746
  ensembl transcript: ENST00000543042
  gene symbol: CLPB
  hgvsc: ENST00000543042.1:c.-428C>G
  variant of: http://identifiers.org/hgnc/30664
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9906
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3157
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6612
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2884
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD

11-72281749-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281749
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281749
    reference: chr 11
allele count: 1
allele frequency: 1.272264631043257e-4
allele num: 7860
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.46G>A
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 512
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 184
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-72281817-CACTCATCCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281817
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281808
    reference: chr 11
allele count: 1
allele frequency: 8.163265306122449e-5
allele num: 12250
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.115_123delACTCATCCT
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3936
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 200
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 188
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7602
  num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: CACTCATCCT
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

11-72281818-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281818
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281818
    reference: chr 11
allele count: 10927
allele frequency: 8.842045638452825e-1
allele num: 12358
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.115A>G
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.75e1
  variant carriers: 332
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 835
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 600
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 381
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.75e1
  variant carriers: 685
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 2.5e0
  variant carriers: 732
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.25e1
  variant carriers: 487
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.25e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 769
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.75e1
  variant carriers: 348
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 792
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 470
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.75e1
  variant carriers: 233
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 6.75e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.75e1
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 5415
  bin: 9.75e1
  variant carriers: 5413
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 147
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 7.5e0
  variant carriers: 458
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 8.25e1
  variant carriers: 128
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.25e1
  variant carriers: 252
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 6.25e1
  variant carriers: 49
num of homozygotes: 4847
population: Other
  type: Population
  allele count: 123
  allele frequency: 9.17910447761194e-1
  allele num: 134
  num of homozygotes: 56
population: Latino
  type: Population
  allele count: 168
  allele frequency: 8.936170212765957e-1
  allele num: 188
  num of homozygotes: 76
population: European (Finnish)
  type: Population
  allele count: 6
  allele frequency: 1.0e0
  allele num: 6
  num of homozygotes: 3
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

11-72281828-CCAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281828
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281825
    reference: chr 11
allele count: 1
allele frequency: 8.126117341134406e-5
allele num: 12306
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.126_128delCAG
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4574
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.763957987838585e-4
  allele num: 3618
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 550
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7618
  num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: CCAG
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/11-72281862-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281862
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281862
    reference: chr 11
allele count: 1
allele frequency: 8.127438231469441e-5
allele num: 12304
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.159A>C
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 4575
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 163
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 380
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 186
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3620
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-72281878-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281878
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281878
    reference: chr 11
allele count: 21
allele frequency: 1.708428246013667e-3
allele num: 12292
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.175G>C
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4578
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 200
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 184
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3616
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

11-72281880-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281880
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281880
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 12290
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.177G>A
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2694
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4577
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 170
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 92
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 151
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 184
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 130
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3614
  num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

11-72281884-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281884
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281884
    reference: chr 11
allele count: 10449
allele frequency: 8.464841218405703e-1
allele num: 12344
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.181C>T
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.25e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 468
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 7.25e1
  variant carriers: 441
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 405
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 508
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.75e1
  variant carriers: 467
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 163
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 3.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 2.5e0
  variant carriers: 839
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.25e1
  variant carriers: 209
genotype depth: GenotypeDepth
  all individuals: 148
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genotype depth: GenotypeDepth
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  variant carriers: 1527
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 383
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 6.25e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 542
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
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  variant carriers: 318
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 496
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 6.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 123
genotype quality: GenotypeQuality
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  variant carriers: 293
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 5559
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  variant carriers: 5518
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 54
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  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.25e1
  variant carriers: 54
num of homozygotes: 4490
population: European (Finnish)
  type: Population
  allele count: 4
  allele frequency: 1.0e0
  allele num: 4
  num of homozygotes: 2
population: Other
  type: Population
  allele count: 117
  allele frequency: 8.863636363636364e-1
  allele num: 132
  num of homozygotes: 51
population: East Asian
  type: Population
  allele count: 165
  allele frequency: 8.009708737864077e-1
  allele num: 206
  num of homozygotes: 64
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

11-72281888-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281888
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281888
    reference: chr 11
allele count: 8
allele frequency: 6.514657980456026e-4
allele num: 12280
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.185G>C
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2704
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 532
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 202
  num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

11-72281893-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281893
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281893
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 12286
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.190G>T
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 536
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3622
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 202
  num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/11-72281902-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281902
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281902
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 12288
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.199C>A
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 178
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 204
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7612
  num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

11-72281905-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72281905
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 72281905
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 12276
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000227467
  ensembl transcript: ENST00000450804
  gene symbol: RP11-169D4.1
  hgvsc: ENST00000450804.3:n.202G>T
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 1756
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1847
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28540
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4390
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3136
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4598
bin: 9.75e1
variant carriers: 33

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.738261057975052e-5
allele num: 64614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

African
type: Population
allele count: 27
allele frequency: 2.845699831365936e-3
allele num: 9488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.089e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 1.746e0

QD
type: SiteQuality
SIO_000300: 1.28e1

VQSLOD
type: SiteQuality
SIO_000300: 2.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

DP
type: SiteQuality
SIO_000300: 1.763595e6

GenotypeQuality
all individuals: 356
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28649
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.054629824931449e-4
allele num: 9482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 7.04e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

QD
type: SiteQuality
SIO_000300: 1.217e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

DP
type: SiteQuality
SIO_000300: 1.762495e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 9.55e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547891771407343e-5
allele num: 64604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.012e1

FS
type: SiteQuality
SIO_000300: 2.05e0

ClippingRankSum
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DP
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ReadPosRankSum
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SIO_000300: -2.268e0

VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.098304671301378e-5
allele num: 16398
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64634
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.217e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 9.994999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -5.688e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.76133e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.099048548426445e-5
allele num: 16396
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 1.661e0

VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

ClippingRankSum
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SIO_000300: -5.26e-1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

QD
type: SiteQuality
SIO_000300: 9.74e0

DP
type: SiteQuality
SIO_000300: 1.760785e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547843853512058e-5
allele num: 64606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
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MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.143e1

MQRankSum
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ClippingRankSum
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SIO_000300: 1.15e0

InbreedingCoeff
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SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.76051e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.389e0

VQSLOD
type: SiteQuality
SIO_000300: 9.399999999999999e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.170138076293003e-4
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64616
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.06e-1

DP
type: SiteQuality
SIO_000300: 1.760238e6

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9518
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.547077570469383e-5
allele num: 64638
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

East Asian
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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MQ
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.759036e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 9.45576801849128e-4
allele num: 9518
num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64638
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.546838262591263e-5
allele num: 64648
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

African
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MQ
type: SiteQuality
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DP
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.107243190423842e-5
allele num: 16374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.359e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 2.466e0

DP
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VQSLOD
type: SiteQuality
SIO_000300: -9.0e-1

ClippingRankSum
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SIO_000300: 4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.511e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.546838262591263e-5
allele num: 64648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

FS
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SIO_000300: 2.292e0

InbreedingCoeff
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BaseQRankSum
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SIO_000300: -8.78e-1

MQRankSum
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SIO_000300: 3.28e-1

DP
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ClippingRankSum
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SIO_000300: -1.046e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.062e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64654
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9528
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.909e1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.538e1

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.757608e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.28e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9534
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546790409899459e-5
allele num: 64650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11482
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16362
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

FS
type: SiteQuality
SIO_000300: 1.0055e1

MQ
type: SiteQuality
SIO_000300: 5.863e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.756298e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.457e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.53e-1

QD
type: SiteQuality
SIO_000300: 1.579e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9488
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.758192651439921e-5
allele num: 64448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.05e-1

QD
type: SiteQuality
SIO_000300: 9.2e-1

FS
type: SiteQuality
SIO_000300: 1.556e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.03e-1

DP
type: SiteQuality
SIO_000300: 1.753285e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.05e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 1
allele frequency: 1.173158141717503e-4
allele num: 8524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64448
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
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African
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9500
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European (Non-Finnish)
type: Population
allele count: 0
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South Asian
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Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8524
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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QD
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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MQ
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 2
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allele num: 11472
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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African
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allele count: 10
allele frequency: 1.046243984097091e-3
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.547604308530395e-5
allele num: 64616
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Other
type: Population
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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African
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European (Non-Finnish)
type: Population
allele count: 0
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allele num: 64626
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Latino
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FS
type: SiteQuality
SIO_000300: 7.66e-1

ReadPosRankSum
type: SiteQuality
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MQ
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MQRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54421075388369e-5
allele num: 64758
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8528
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.303e0

DP
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VQSLOD
type: SiteQuality
SIO_000300: -2.009e0

QD
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MQ
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e0

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 8.836e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.84e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

European (Non-Finnish)
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allele count: 18
allele frequency: 2.780008648915797e-4
allele num: 64748
num of homozygotes: 1

South Asian
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allele count: 1
allele frequency: 6.130456105934282e-5
allele num: 16312
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
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allele count: 11
allele frequency: 1.673767498478393e-3
allele num: 6572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8532
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Other
type: Population
allele count: 1
allele frequency: 1.136363636363636e-3
allele num: 880
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

BaseQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-2

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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SIO_000300: 3.55e-1

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.394e1

DP
type: SiteQuality
SIO_000300: 1.755728e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 45

GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543733983759918e-5
allele num: 64778
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 3.161592505854801e-3
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.141552511415525e-3
allele num: 876
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11492
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South Asian
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allele count: 17
allele frequency: 1.045639069996309e-3
allele num: 16258
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.49e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.63e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64874
num of homozygotes: 0

Other
type: Population
allele count: 0
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East Asian
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allele count: 1
allele frequency: 1.17096018735363e-4
allele num: 8540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.9e0

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

DP
type: SiteQuality
SIO_000300: 1.756207e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.154e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.21580547112462e-3
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.003884452939544e-4
allele num: 64874
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.154e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.157e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 17
allele frequency: 1.047443006777572e-3
allele num: 16230
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.08090455357693e-5
allele num: 64916
num of homozygotes: 0

Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
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MQ
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BaseQRankSum
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MQRankSum
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FS
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QD
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.84e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
type: Population
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South Asian
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Other
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East Asian
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South Asian
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
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FS
type: SiteQuality
SIO_000300: 8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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European (Non-Finnish)
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allele num: 65316
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European (Finnish)
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Latino
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East Asian
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South Asian
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African
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e-1

MQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.504e0

DP
type: SiteQuality
SIO_000300: 1.765126e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -9.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

DP
type: SiteQuality
SIO_000300: 1.766067e6

QD
type: SiteQuality
SIO_000300: 1.603e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.242976651267325e-5
allele num: 16018
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.23e-1

DP
type: SiteQuality
SIO_000300: 1.766067e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e0

QD
type: SiteQuality
SIO_000300: 1.603e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15712
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.885330170027679e-5
allele num: 10116
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.204e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.576e0

QD
type: SiteQuality
SIO_000300: 1.182e1

MQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

MQ
type: SiteQuality
SIO_000300: 5.577e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 1.763454e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528023959415684e-5
allele num: 65444
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.758942e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.949e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.36e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4257
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.397233477714126e-4
allele num: 14314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.339e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

FS
type: SiteQuality
SIO_000300: 1.957e0

DP
type: SiteQuality
SIO_000300: 1.738251e6

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4421
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5416872224963e-5
allele num: 64864
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: 7.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 9.58e0

FS
type: SiteQuality
SIO_000300: 6.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.886e0

VQSLOD
type: SiteQuality
SIO_000300: -1.559e-1

DP
type: SiteQuality
SIO_000300: 1.727351e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.446e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13122
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.895111814763506e-5
allele num: 10106
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.546312045770837e-5
allele num: 64670
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.56e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.895e1

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 2.25e-1

ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5535669898086e-5
allele num: 64368
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.768e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-2

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.715132e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 215

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64368
num of homozygotes: 0

African
type: Population
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allele frequency: 2.980329823167097e-4
allele num: 10066
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Other
type: Population
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South Asian
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allele count: 218
allele frequency: 1.753257198005469e-2
allele num: 12434
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East Asian
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allele frequency: 0.0e0
allele num: 8540
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Latino
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allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27399
bin: 6.25e1
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South Asian
type: Population
allele count: 0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
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African
type: Population
allele count: 1
allele frequency: 9.932459276916965e-5
allele num: 10068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.708303e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.041e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.91e-1

FS
type: SiteQuality
SIO_000300: 4.017e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.94e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 188
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4333
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 950
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8773
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3072
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55865207768322e-5
allele num: 64158
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.351e0

VQSLOD
type: SiteQuality
SIO_000300: 9.27e-1

QD
type: SiteQuality
SIO_000300: 1.123e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

FS
type: SiteQuality
SIO_000300: 5.224e0

DP
type: SiteQuality
SIO_000300: 1.704181e6

MQ
type: SiteQuality
SIO_000300: 5.955e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

GenotypeQuality
all individuals: 119
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.868544600938967e-4
allele num: 8520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.700617e6

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

FS
type: SiteQuality
SIO_000300: 2.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.11e-1

QD
type: SiteQuality
SIO_000300: 1.115e1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
all individuals: 235
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3074
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4007
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.736676568233443e-5
allele num: 11446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

DP
type: SiteQuality
SIO_000300: 1.699397e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.116e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

FS
type: SiteQuality
SIO_000300: 2.446e0

QD
type: SiteQuality
SIO_000300: 1.308e1

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1732
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3068
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3610
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4246
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27333
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8758
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63730
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e-1

DP
type: SiteQuality
SIO_000300: 1.693418e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 1.017e1

FS
type: SiteQuality
SIO_000300: 8.159999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

GenotypeQuality
all individuals: 144
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3066
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2402
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8743
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180358829084042e-4
allele num: 8472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

FS
type: SiteQuality
SIO_000300: 9.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-2

DP
type: SiteQuality
SIO_000300: 1.685997e6

QD
type: SiteQuality
SIO_000300: 1.031e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.143e0

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.13e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 2933
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8706
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3061
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.579928587227857e-5
allele num: 63294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.166e1

DP
type: SiteQuality
SIO_000300: 1.679571e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.799999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

FS
type: SiteQuality
SIO_000300: 1.689e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

MQ
type: SiteQuality
SIO_000300: 5.902e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.811e0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3288
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3062
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 27224
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63288
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.007658202337767e-4
allele num: 9924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.56e-1

QD
type: SiteQuality
SIO_000300: 1.552e1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.416e0

FS
type: SiteQuality
SIO_000300: 5.063e0

VQSLOD
type: SiteQuality
SIO_000300: -4.107e-1

MQ
type: SiteQuality
SIO_000300: 5.781e1

DP
type: SiteQuality
SIO_000300: 1.679164e6

GenotypeQuality
all individuals: 3059
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4236
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4319
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582228410493339e-5
allele num: 63202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.31e-1

DP
type: SiteQuality
SIO_000300: 1.675257e6

QD
type: SiteQuality
SIO_000300: 1.271e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 2.326e0

GenotypeQuality
all individuals: 205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3749
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588259585146596e-5
allele num: 62962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.663179e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.09e-1

FS
type: SiteQuality
SIO_000300: 1.071e0

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.005e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

MQ
type: SiteQuality
SIO_000300: 5.864e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.95e-1

GenotypeQuality
all individuals: 161
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
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variant carriers: 0

GenotypeQuality
all individuals: 8580
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4198
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.320053120849933e-4
allele num: 9036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.941e0

FS
type: SiteQuality
SIO_000300: 1.514e0

DP
type: SiteQuality
SIO_000300: 1.653044e6

VQSLOD
type: SiteQuality
SIO_000300: 1.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.63e-1

QD
type: SiteQuality
SIO_000300: 1.579e1

MQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

GenotypeQuality
all individuals: 8525
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25844
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1346
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4309
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.114578689255461e-4
allele num: 8972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.644505e6

QD
type: SiteQuality
SIO_000300: 1.455e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.051e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.79e-1

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8401
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4306
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25021
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596525959512102e-5
allele num: 62636
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.56e-1

DP
type: SiteQuality
SIO_000300: 1.631278e6

FS
type: SiteQuality
SIO_000300: 4.257e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

VQSLOD
type: SiteQuality
SIO_000300: 4.89e-1

QD
type: SiteQuality
SIO_000300: 1.57e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3026
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3192
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4303
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1785
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598261091931978e-5
allele num: 62568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

DP
type: SiteQuality
SIO_000300: 1.624011e6

VQSLOD
type: SiteQuality
SIO_000300: -1.838e-1

GenotypeQuality
all individuals: 322
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3644
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 10
allele frequency: 8.8261253309797e-4
allele num: 11330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.561065403207735e-4
allele num: 62474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8392
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.305483028720627e-3
allele num: 766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.125112511251125e-4
allele num: 8888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.49e-1

DP
type: SiteQuality
SIO_000300: 1.597252e6

VQSLOD
type: SiteQuality
SIO_000300: 4.11e0

QD
type: SiteQuality
SIO_000300: 1.325e1

GenotypeQuality
all individuals: 905
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4277
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1088
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 1.126887536623845e-3
allele num: 8874
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

QD
type: SiteQuality
SIO_000300: 1.68e1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 1.587824e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 3.586e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

GenotypeQuality
all individuals: 703
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20913
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7431
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4017
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.034126163391934e-4
allele num: 9670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

QD
type: SiteQuality
SIO_000300: 1.524e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

DP
type: SiteQuality
SIO_000300: 1.566156e6

GenotypeQuality
all individuals: 305
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3984
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.604055051169356e-5
allele num: 62342
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.03498240529911e-4
allele num: 9662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8860
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.564841e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.045999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.862e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.32e-1

GenotypeQuality
all individuals: 3374
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.623095429029671e-5
allele num: 62350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.01e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

FS
type: SiteQuality
SIO_000300: 7.881e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

QD
type: SiteQuality
SIO_000300: 1.269e1

DP
type: SiteQuality
SIO_000300: 1.555279e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.35e-1

GenotypeQuality
all individuals: 2988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3958
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.28307939053729e-4
allele num: 62350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

FS
type: SiteQuality
SIO_000300: 7.881e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.01e-1

DP
type: SiteQuality
SIO_000300: 1.555279e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

GenotypeQuality
all individuals: 1005
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2893
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 202
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1238
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 19849
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4412
bin: 9.75e1
variant carriers: 239

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8386
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.143360265175057e-4
allele num: 9654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

South Asian
type: Population
allele count: 25
allele frequency: 2.826775214834916e-3
allele num: 8844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.535155050660117e-4
allele num: 6514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 198
allele frequency: 3.179599177800617e-3
allele num: 62272
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.727626459143969e-4
allele num: 11308
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.264e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.392e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.32e-1

DP
type: SiteQuality
SIO_000300: 1.541661e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 829
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7096
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4195
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.605806596653499e-5
allele num: 62274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

QD
type: SiteQuality
SIO_000300: 1.112e1

FS
type: SiteQuality
SIO_000300: 2.474e0

DP
type: SiteQuality
SIO_000300: 1.531114e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 9.330000000000001e-1

GenotypeQuality
all individuals: 3868
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6749
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.607561971514002e-5
allele num: 62206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.423213021939136e-4
allele num: 11304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.793e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.134e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.508613e6

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

GenotypeQuality
all individuals: 2862
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3823
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17223
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.132502831257078e-4
allele num: 8830
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.869e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.639e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.498631e6

VQSLOD
type: SiteQuality
SIO_000300: -1.934e0

FS
type: SiteQuality
SIO_000300: 3.153e0

MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.337540906965872e-4
allele num: 4278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.829e1

VQSLOD
type: SiteQuality
SIO_000300: -6.496e-1

QD
type: SiteQuality
SIO_000300: 6.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 8.6608e4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.54e-2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.797985450475658e-4
allele num: 3574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.82e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 4.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.86e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

FS
type: SiteQuality
SIO_000300: 1.965e0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

DP
type: SiteQuality
SIO_000300: 1.53225e5

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

East Asian
type: Population
allele count: 161
allele frequency: 7.970297029702971e-1
allele num: 202
num of homozygotes: 62

European (Non-Finnish)
type: Population
allele count: 3198
allele frequency: 8.771256171146462e-1
allele num: 3646
num of homozygotes: 1396

African
type: Population
allele count: 429
allele frequency: 7.606382978723404e-1
allele num: 564
num of homozygotes: 167

South Asian
type: Population
allele count: 6842
allele frequency: 8.981359936991337e-1
allele num: 7618
num of homozygotes: 3087

VQSLOD
type: SiteQuality
SIO_000300: 8.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.04077e5

QD
type: SiteQuality
SIO_000300: 2.824e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.061e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.86e-1

FS
type: SiteQuality
SIO_000300: 5.544e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-2

QD
type: SiteQuality
SIO_000300: 1.174e1

DP
type: SiteQuality
SIO_000300: 2.9982e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.53e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.818181818181818e-3
allele num: 550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.43e-2

FS
type: SiteQuality
SIO_000300: 1.187e0

QD
type: SiteQuality
SIO_000300: 1.26e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

DP
type: SiteQuality
SIO_000300: 2.99222e5

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

South Asian
type: Population
allele count: 21
allele frequency: 2.758077226162333e-3
allele num: 7614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.752e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.65e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e-1

DP
type: SiteQuality
SIO_000300: 3.00325e5

FS
type: SiteQuality
SIO_000300: 1.111e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

QD
type: SiteQuality
SIO_000300: 1.097e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.588e0

DP
type: SiteQuality
SIO_000300: 3.00414e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.19e-2

QD
type: SiteQuality
SIO_000300: 2.757e1

European (Non-Finnish)
type: Population
allele count: 3077
allele frequency: 8.393344244408074e-1
allele num: 3666
num of homozygotes: 1287

South Asian
type: Population
allele count: 6685
allele frequency: 8.782186022070415e-1
allele num: 7612
num of homozygotes: 2956

Latino
type: Population
allele count: 150
allele frequency: 8.426966292134831e-1
allele num: 178
num of homozygotes: 66

African
type: Population
allele count: 251
allele frequency: 4.597069597069597e-1
allele num: 546
num of homozygotes: 64

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.161e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

DP
type: SiteQuality
SIO_000300: 4.72401e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.674e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.765e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 2.208724461623413e-3
allele num: 3622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.127e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.265e1

DP
type: SiteQuality
SIO_000300: 2.01678e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.03e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.01311e5

QD
type: SiteQuality
SIO_000300: 2.922e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.39e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.01e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3626
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.968e1

DP
type: SiteQuality
SIO_000300: 2.01217e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.73e-2