16-3142081-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142081
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142081
    reference: chr 16
allele count: 3
allele frequency: 2.692369823919014e-5
allele num: 111426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1157C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.468C>T
  hgvsp: ENST00000576985.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-252C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.468C>T
  hgvsp: ENST00000252463.2:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-252C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-252C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-550C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5043
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4464
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7132
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro156Pro
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

16-3142082-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142082
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142082
    reference: chr 16
allele count: 2
allele frequency: 1.793625455132459e-5
allele num: 111506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-253C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1156C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.467C>T
  hgvsp: ENSP00000458879.1:p.Pro156Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-551C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.467C>T
  hgvsp: ENSP00000252463.2:p.Pro156Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-253C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-253C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15829
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3626
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4498
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro156Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

16-3142083-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142083
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142083
    reference: chr 16
allele count: 1
allele frequency: 8.962179602079226e-6
allele num: 111580
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.466C>A
  hgvsp: ENSP00000252463.2:p.Pro156Thr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-254C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.466C>A
  hgvsp: ENSP00000458879.1:p.Pro156Thr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1155C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-254C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-552C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-254C>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4494
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7121
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15842
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11406
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro156Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

16-3142086-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142086
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142086
    reference: chr 16
allele count: 3
allele frequency: 2.678093197643278e-5
allele num: 112020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1152G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-257G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.463G>A
  hgvsp: ENSP00000458879.1:p.Gly155Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-257G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.463G>A
  hgvsp: ENSP00000252463.2:p.Gly155Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-555G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-257G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9137
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3616
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2324
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly155Arg
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

16-3142087-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142087
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142087
    reference: chr 16
allele count: 8
allele frequency: 7.140944389895563e-5
allele num: 112030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.462G>A
  hgvsp: ENST00000576985.1:c.462G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-258G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1151G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-556G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.462G>A
  hgvsp: ENST00000252463.2:c.462G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-258G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-258G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12523
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9141
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4474
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3604
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro154Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

16-3142088-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142088
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142088
    reference: chr 16
allele count: 3
allele frequency: 2.669656682150675e-5
allele num: 112374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-259C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-557C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.461C>T
  hgvsp: ENSP00000458879.1:p.Pro154Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.461C>T
  hgvsp: ENSP00000252463.2:p.Pro154Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-259C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-259C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1150C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12528
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15785
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4372
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5019
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11380
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3602
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro154Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-3142096-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142096
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142096
    reference: chr 16
allele count: 4
allele frequency: 3.532071206555524e-5
allele num: 113248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-267G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-267G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1142G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.453G>A
  hgvsp: ENST00000576985.1:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.453G>A
  hgvsp: ENST00000252463.2:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-565G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-267G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6070
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11365
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3305
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15363
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4335
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro151Pro
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

16-3142097-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142097
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142097
    reference: chr 16
allele count: 4
allele frequency: 3.517906142264124e-5
allele num: 113704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-566C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-268C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-268C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-268C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.452C>A
  hgvsp: ENSP00000252463.2:p.Pro151Gln
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.452C>A
  hgvsp: ENSP00000458879.1:p.Pro151Gln
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1141C>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12283
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6926
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11363
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro151Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

16-3142102-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142102
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142102
    reference: chr 16
allele count: 3
allele frequency: 2.628028803195683e-5
allele num: 114154
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.447G>C
  hgvsp: ENSP00000252463.2:p.Lys149Asn
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-273G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-571G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-273G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1136G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.447G>C
  hgvsp: ENSP00000458879.1:p.Lys149Asn
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-273G>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13302
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3726
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11285
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16419
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Lys149Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

16-3142108-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142108
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142108
    reference: chr 16
allele count: 1
allele frequency: 8.665511265164645e-6
allele num: 115400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-279T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-279T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1130T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.441T>C
  hgvsp: ENST00000252463.2:c.441T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-577T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.441T>C
  hgvsp: ENST00000576985.1:c.441T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-279T>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13274
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16710
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6951
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4343
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser147Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

16-3142109-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142109
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142109
    reference: chr 16
allele count: 2
allele frequency: 1.731691689611582e-5
allele num: 115494
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-280G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-578G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.440G>C
  hgvsp: ENSP00000458879.1:p.Ser147Thr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-280G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-280G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1129G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.440G>C
  hgvsp: ENSP00000252463.2:p.Ser147Thr
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12146
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11328
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16935
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser147Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

16-3142110-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142110
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142110
    reference: chr 16
allele count: 1
allele frequency: 8.641548565502938e-6
allele num: 115720
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-281A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-281A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-579A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1128A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.439A>G
  hgvsp: ENSP00000458879.1:p.Ser147Gly
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-281A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.439A>G
  hgvsp: ENSP00000252463.2:p.Ser147Gly
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4947
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3575
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser147Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

16-3142122-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142122
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142122
    reference: chr 16
allele count: 5
allele frequency: 4.265265384812243e-5
allele num: 117226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-293A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1116A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.427A>C
  hgvsp: ENST00000252463.2:c.427A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-591A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-293A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.427A>C
  hgvsp: ENST00000576985.1:c.427A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-293A>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8903
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg143Arg
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

16-3142124-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142124
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142124
    reference: chr 16
allele count: 1
allele frequency: 8.510348583877996e-6
allele num: 117504
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.425G>C
  hgvsp: ENSP00000252463.2:p.Trp142Ser
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1114G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-593G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-295G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-295G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-295G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.425G>C
  hgvsp: ENSP00000458879.1:p.Trp142Ser
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5990
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3303
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2431
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11310
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Trp142Ser
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

16-3142126-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142126
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142126
    reference: chr 16
allele count: 2
allele frequency: 1.699264218593349e-5
allele num: 117698
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.423G>A
  hgvsp: ENST00000252463.2:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1112G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.423G>A
  hgvsp: ENST00000576985.1:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-595G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-297G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-297G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-297G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln141Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

16-3142130-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142130
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142130
    reference: chr 16
allele count: 1
allele frequency: 8.46811753747142e-6
allele num: 118090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-599G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1108G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-301G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-301G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.419G>C
  hgvsp: ENSP00000252463.2:p.Gly140Ala
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.419G>C
  hgvsp: ENSP00000458879.1:p.Gly140Ala
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-301G>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3303
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7152
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly140Ala
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

16-3142132-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142132
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142132
    reference: chr 16
allele count: 2
allele frequency: 1.690702825164421e-5
allele num: 118294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.417G>A
  hgvsp: ENST00000576985.1:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-303G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-601G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.417G>A
  hgvsp: ENST00000252463.2:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1106G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-303G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-303G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19059
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4985
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4356
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11306
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro139Pro
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

16-3142133-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142133
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142133
    reference: chr 16
allele count: 3
allele frequency: 2.533099162388543e-5
allele num: 118432
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.416C>T
  hgvsp: ENSP00000458879.1:p.Pro139Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-304C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.416C>T
  hgvsp: ENSP00000252463.2:p.Pro139Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-304C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-602C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-304C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1105C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18919
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro139Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

16-3142138-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142138
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142138
    reference: chr 16
allele count: 17
allele frequency: 1.43035035169791e-4
allele num: 118852
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-309T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-309T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1100T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-607T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.411T>C
  hgvsp: ENST00000252463.2:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.411T>C
  hgvsp: ENST00000576985.1:c.411T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-309T>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8796
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8865
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5979
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14413
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12256
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4365
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19719
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3599
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3294
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala137Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

16-3142142-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142142
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142142
    reference: chr 16
allele count: 1
allele frequency: 8.396587626788473e-6
allele num: 119096
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-313C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.407C>G
  hgvsp: ENSP00000252463.2:p.Pro136Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1096C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.407C>G
  hgvsp: ENSP00000458879.1:p.Pro136Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-611C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-313C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-313C>G
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14545
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19911
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro136Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

16-3142144-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142144
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142144
    reference: chr 16
allele count: 1
allele frequency: 8.39390937935434e-6
allele num: 119134
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.405G>C
  hgvsp: ENSP00000458879.1:p.Gln135His
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-315G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-315G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.405G>C
  hgvsp: ENSP00000252463.2:p.Gln135His
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-613G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1094G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-315G>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4365
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7240
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln135His
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

16-3142164-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142164
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142164
    reference: chr 16
allele count: 77
allele frequency: 6.431888803501621e-4
allele num: 119716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.385C>T
  hgvsp: ENSP00000458879.1:p.Pro129Ser
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-335C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1074C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.385C>T
  hgvsp: ENSP00000252463.2:p.Pro129Ser
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-335C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-633C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-335C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8880
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 15075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5022
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20537
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro129Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

16-3142166-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142166
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142166
    reference: chr 16
allele count: 1
allele frequency: 8.353800143685363e-6
allele num: 119706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-337G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.383G>C
  hgvsp: ENSP00000252463.2:p.Arg128Pro
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-337G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-337G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-635G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1072G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.383G>C
  hgvsp: ENSP00000458879.1:p.Arg128Pro
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4384
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg128Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-3142166-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142166
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142166
    reference: chr 16
allele count: 3
allele frequency: 2.506140043105609e-5
allele num: 119706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-337G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-337G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.383G>A
  hgvsp: ENSP00000458879.1:p.Arg128Gln
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1072G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-635G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-337G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.383G>A
  hgvsp: ENSP00000252463.2:p.Arg128Gln
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3613
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11252
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7320
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5040
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg128Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

16-3142168-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142168
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142168
    reference: chr 16
allele count: 1
allele frequency: 8.34153584357952e-6
allele num: 119882
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-339C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-339C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1070C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.381C>G
  hgvsp: ENST00000252463.2:c.381C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-339C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-637C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.381C>G
  hgvsp: ENST00000576985.1:c.381C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8915
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11251
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5052
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2306
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3636
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro127Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

16-3142172-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142172
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142172
    reference: chr 16
allele count: 2
allele frequency: 1.666472244904761e-5
allele num: 120014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.377C>G
  hgvsp: ENSP00000458879.1:p.Pro126Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-343C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1066C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-343C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.377C>G
  hgvsp: ENSP00000252463.2:p.Pro126Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-641C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-343C>G
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5962
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11253
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3310
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3642
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro126Arg
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

16-3142173-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142173
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142173
    reference: chr 16
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.376C>G
  hgvsp: ENSP00000252463.2:p.Pro126Ala
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-642C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.376C>G
  hgvsp: ENSP00000458879.1:p.Pro126Ala
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1065C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-344C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-344C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-344C>G
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4397
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3310
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro126Ala
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

16-3142173-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142173
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142173
    reference: chr 16
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-642C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.376C>A
  hgvsp: ENSP00000458879.1:p.Pro126Thr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1065C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.376C>A
  hgvsp: ENSP00000252463.2:p.Pro126Thr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-344C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-344C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-344C>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro126Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

16-3142180-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142180
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142180
    reference: chr 16
allele count: 4
allele frequency: 3.329227286346839e-5
allele num: 120148
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.369G>A
  hgvsp: ENST00000252463.2:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-351G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.369G>A
  hgvsp: ENST00000576985.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-351G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1058G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-351G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-649G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15433
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8927
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser123Ser
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

16-3142181-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142181
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142181
    reference: chr 16
allele count: 22
allele frequency: 1.83064838237252e-4
allele num: 120176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-352C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.368C>T
  hgvsp: ENSP00000252463.2:p.Ser123Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1057C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.368C>T
  hgvsp: ENSP00000458879.1:p.Ser123Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-650C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-352C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-352C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8915
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12451
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21378
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser123Leu
num of homozygotes: 1
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

16-3142182-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142182
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142182
    reference: chr 16
allele count: 1
allele frequency: 8.31766839119658e-6
allele num: 120226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-353T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.367T>C
  hgvsp: ENSP00000252463.2:p.Ser123Pro
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-353T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.367T>C
  hgvsp: ENSP00000458879.1:p.Ser123Pro
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-353T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-651T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1056T>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11244
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser123Pro
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

16-3142184-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142184
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142184
    reference: chr 16
allele count: 14
allele frequency: 1.164434833236297e-4
allele num: 120230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-355C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1054C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.365C>T
  hgvsp: ENSP00000252463.2:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-355C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.365C>T
  hgvsp: ENSP00000458879.1:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.254-355C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-653C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15482
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21564
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7443
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro122Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-3142192-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142192
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142192
    reference: chr 16
allele count: 1
allele frequency: 8.3099270388406e-6
allele num: 120338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1046G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+351G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-661G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-363G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.357G>T
  hgvsp: ENST00000252463.2:c.357G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-363G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.357G>T
  hgvsp: ENST00000576985.1:c.357G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3682
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val119Val
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

16-3142200-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142200
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142200
    reference: chr 16
allele count: 1
allele frequency: 8.304958059961797e-6
allele num: 120410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+343C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.349C>T
  hgvsp: ENSP00000252463.2:p.Pro117Ser
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.349C>T
  hgvsp: ENSP00000458879.1:p.Pro117Ser
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-371C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1038C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-371C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-669C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15578
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7477
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro117Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

16-3142207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142207
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142207
    reference: chr 16
allele count: 4
allele frequency: 3.320714617785747e-5
allele num: 120456
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.342G>A
  hgvsp: ENST00000252463.2:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+336G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.342G>A
  hgvsp: ENST00000576985.1:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1031G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-378G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-378G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-676G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8922
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15597
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3679
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11238
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala114Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

16-3142208-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142208
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142208
    reference: chr 16
allele count: 2
allele frequency: 1.660384877214538e-5
allele num: 120454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-677C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.341C>T
  hgvsp: ENSP00000252463.2:p.Ala114Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-379C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1030C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-379C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.341C>T
  hgvsp: ENSP00000458879.1:p.Ala114Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+335C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 15591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8926
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3315
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7484
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala114Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-3142208-GCAGGCAATTCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142208
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142197
    reference: chr 16
allele count: 1
allele frequency: 8.301924386072691e-6
allele num: 120454
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsp: ENSP00000458879.1:p.Lys110AsnfsTer12
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsp: ENSP00000252463.2:p.Lys110AsnfsTer12
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11237
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys110AsnfsTer12
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: GCAGGCAATTCC
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/16-3142213-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142213
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142213
    reference: chr 16
allele count: 7
allele frequency: 5.809514324602463e-5
allele num: 120492
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+330G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-384G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.336G>T
  hgvsp: ENSP00000252463.2:p.Leu112Phe
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-384G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1025G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.336G>T
  hgvsp: ENSP00000458879.1:p.Leu112Phe
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-682G>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3677
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7495
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu112Phe
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-3142222-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142222
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142222
    reference: chr 16
allele count: 9
allele frequency: 7.46999551800269e-5
allele num: 120482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-691G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+321G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-393G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.327G>A
  hgvsp: ENST00000576985.1:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.327G>A
  hgvsp: ENST00000252463.2:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-393G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1016G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15530
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11238
  bin: 9.75e1
  variant carriers: 9
hgvs: p.Lys109Lys
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

16-3142230-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142230
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142230
    reference: chr 16
allele count: 3
allele frequency: 2.491859924247458e-5
allele num: 120392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-699A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.319A>C
  hgvsp: ENST00000576483.1:c.319A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+313A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.319A>C
  hgvsp: ENSP00000252463.2:p.Ser107Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.319A>C
  hgvsp: ENSP00000458879.1:p.Ser107Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1008A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-401A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-401A>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9262
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8921
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15582
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7474
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser107Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

16-3142233-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142233
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142233
    reference: chr 16
allele count: 1
allele frequency: 8.309650828472188e-6
allele num: 120342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1005C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.316C>G
  hgvsp: ENSP00000458879.1:p.His106Asp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-404C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-702C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.316C>G
  hgvsp: ENSP00000458260.1:p.His106Asp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+310C>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.316C>G
  hgvsp: ENSP00000252463.2:p.His106Asp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-404C>G
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11232
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4417
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His106Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS

16-3142234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142234
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142234
    reference: chr 16
allele count: 20
allele frequency: 1.662095902933599e-4
allele num: 120330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-405C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-405C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.315C>T
  hgvsp: ENST00000252463.2:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.315C>T
  hgvsp: ENST00000576483.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.315C>T
  hgvsp: ENST00000576985.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-703C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+309C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.1004C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5056
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser105Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum

16-3142239-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142239
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142239
    reference: chr 16
allele count: 3
allele frequency: 2.4942631946523e-5
allele num: 120276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-708C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.310C>T
  hgvsp: ENSP00000458260.1:p.Pro104Ser
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.310C>T
  hgvsp: ENSP00000458879.1:p.Pro104Ser
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-410C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-410C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.999C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+304C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.310C>T
  hgvsp: ENSP00000252463.2:p.Pro104Ser
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4418
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro104Ser
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

16-3142241-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142241
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142241
    reference: chr 16
allele count: 1
allele frequency: 8.33625102119075e-6
allele num: 119958
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.308T>C
  hgvsp: ENSP00000458879.1:p.Val103Ala
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.308T>C
  hgvsp: ENSP00000458260.1:p.Val103Ala
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-412T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.308T>C
  hgvsp: ENSP00000252463.2:p.Val103Ala
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+302T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-710T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-412T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.997T>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 12488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11206
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4399
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val103Ala
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-3142243-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142243
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142243
    reference: chr 16
allele count: 1
allele frequency: 8.319467554076538e-6
allele num: 120200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.306G>T
  hgvsp: ENSP00000458260.1:p.Gln102His
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.995G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+300G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.306G>T
  hgvsp: ENSP00000458879.1:p.Gln102His
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-414G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-414G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-712G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.306G>T
  hgvsp: ENSP00000252463.2:p.Gln102His
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5062
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln102His
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

16-3142246-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142246
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142246
    reference: chr 16
allele count: 2
allele frequency: 1.66472448809722e-5
allele num: 120140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-417C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+297C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.992C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.303C>T
  hgvsp: ENST00000576483.1:c.303C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-417C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.303C>T
  hgvsp: ENST00000252463.2:c.303C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-715C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.303C>T
  hgvsp: ENST00000576985.1:c.303C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6021
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5059
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser101Ser
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

16-3142247-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142247
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142247
    reference: chr 16
allele count: 2
allele frequency: 1.665251203143994e-5
allele num: 120102
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.302C>A
  hgvsp: ENSP00000252463.2:p.Ser101Tyr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.991C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-418C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-716C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-418C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+296C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.302C>A
  hgvsp: ENSP00000458879.1:p.Ser101Tyr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.302C>A
  hgvsp: ENSP00000458260.1:p.Ser101Tyr
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12521
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3653
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7466
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser101Tyr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

16-3142250-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142250
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142250
    reference: chr 16
allele count: 1
allele frequency: 8.333888925928395e-6
allele num: 119992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-719C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.97-421C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.299C>T
  hgvsp: ENSP00000458260.1:p.Ala100Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.299C>T
  hgvsp: ENSP00000252463.2:p.Ala100Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-421C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.299C>T
  hgvsp: ENSP00000458879.1:p.Ala100Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.988C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+293C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7453
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala100Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-3142255-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142255
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142255
    reference: chr 16
allele count: 1
allele frequency: 8.348499774590506e-6
allele num: 119782
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.983G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.294G>A
  hgvsp: ENST00000576483.1:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+288G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-724G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+423G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.294G>A
  hgvsp: ENST00000252463.2:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-426G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.294G>A
  hgvsp: ENST00000576985.1:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5053
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly98Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/16-3142257-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142257
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142257
    reference: chr 16
allele count: 1
allele frequency: 8.356592515835743e-6
allele num: 119666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.292G>T
  hgvsp: ENSP00000458879.1:p.Gly98Trp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+421G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.292G>T
  hgvsp: ENSP00000458260.1:p.Gly98Trp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.981G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+286G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-726G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.292G>T
  hgvsp: ENSP00000252463.2:p.Gly98Trp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-428G>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5056
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly98Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

16-3142258-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142258
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142258
    reference: chr 16
allele count: 1
allele frequency: 8.357430591538938e-6
allele num: 119654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.980G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+285G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-727G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.291G>A
  hgvsp: ENST00000252463.2:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.291G>A
  hgvsp: ENST00000576483.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.291G>A
  hgvsp: ENST00000576985.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+420G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-429G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys97Lys
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

16-3142273-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142273
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142273
    reference: chr 16
allele count: 1
allele frequency: 8.450656616019065e-6
allele num: 118334
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.276C>A
  hgvsp: ENST00000252463.2:c.276C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.276C>A
  hgvsp: ENST00000576985.1:c.276C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-444C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+405C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.276C>A
  hgvsp: ENST00000576483.1:c.276C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.965C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-742C>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+270C>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val92Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

16-3142275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142275
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142275
    reference: chr 16
allele count: 2
allele frequency: 1.696208972945467e-5
allele num: 117910
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.274G>A
  hgvsp: ENSP00000252463.2:p.Val92Ile
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+403G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-446G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.274G>A
  hgvsp: ENSP00000458260.1:p.Val92Ile
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+268G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-744G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.274G>A
  hgvsp: ENSP00000458879.1:p.Val92Ile
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.963G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11318
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val92Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

16-3142276-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142276
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142276
    reference: chr 16
allele count: 6
allele frequency: 5.095541401273886e-5
allele num: 117750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-447C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+267C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.273C>T
  hgvsp: ENST00000576985.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.962C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.273C>T
  hgvsp: ENST00000252463.2:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-745C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+402C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.273C>T
  hgvsp: ENST00000576483.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3129
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18812
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp91Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

16-3142281-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142281
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142281
    reference: chr 16
allele count: 2
allele frequency: 1.707183829554766e-5
allele num: 117152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.957G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.268G>A
  hgvsp: ENSP00000252463.2:p.Ala90Thr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.268G>A
  hgvsp: ENSP00000458879.1:p.Ala90Thr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.268G>A
  hgvsp: ENSP00000458260.1:p.Ala90Thr
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-750G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+397G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-452G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+262G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7215
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala90Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/16-3142283-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142283
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142283
    reference: chr 16
allele count: 1
allele frequency: 8.553295584788819e-6
allele num: 116914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+260G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-454G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.266G>T
  hgvsp: ENSP00000252463.2:p.Arg89Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.266G>T
  hgvsp: ENSP00000458879.1:p.Arg89Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-752G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.266G>T
  hgvsp: ENSP00000458260.1:p.Arg89Leu
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+395G>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.955G>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5032
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg89Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

16-3142283-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142283
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142283
    reference: chr 16
allele count: 1
allele frequency: 8.553295584788819e-6
allele num: 116914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-752G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+260G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-454G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.955G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+395G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.266G>C
  hgvsp: ENSP00000252463.2:p.Arg89Pro
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.266G>C
  hgvsp: ENSP00000458879.1:p.Arg89Pro
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.266G>C
  hgvsp: ENSP00000458260.1:p.Arg89Pro
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3673
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11313
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg89Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

16-3142283-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142283
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142283
    reference: chr 16
allele count: 7
allele frequency: 5.987306909352173e-5
allele num: 116914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.266G>A
  hgvsp: ENSP00000458879.1:p.Arg89His
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.266G>A
  hgvsp: ENSP00000252463.2:p.Arg89His
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.266G>A
  hgvsp: ENSP00000458260.1:p.Arg89His
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.955G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-752G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+260G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+395G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-454G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18195
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg89His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

16-3142284-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142284
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142284
    reference: chr 16
allele count: 2
allele frequency: 1.712504709387951e-5
allele num: 116788
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.265C>T
  hgvsp: ENSP00000458260.1:p.Arg89Cys
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-753C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.265C>T
  hgvsp: ENSP00000458879.1:p.Arg89Cys
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.265C>T
  hgvsp: ENSP00000252463.2:p.Arg89Cys
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.954C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-455C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+394C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+259C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14400
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3590
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5035
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg89Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-3142291-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142291
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142291
    reference: chr 16
allele count: 9
allele frequency: 7.785467128027681e-5
allele num: 115600
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+387T>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.947T>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.258T>G
  hgvsp: ENSP00000252463.2:p.Ser86Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-462T>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.258T>G
  hgvsp: ENSP00000458879.1:p.Ser86Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.258T>G
  hgvsp: ENSP00000458260.1:p.Ser86Arg
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+252T>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-760T>G
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14009
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17130
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7102
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser86Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

16-3142292-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142292
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142292
    reference: chr 16
allele count: 1
allele frequency: 8.678446210990383e-6
allele num: 115228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-463G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.257G>A
  hgvsp: ENSP00000458260.1:p.Ser86Asn
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+386G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.946G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.257G>A
  hgvsp: ENSP00000458879.1:p.Ser86Asn
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-761G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+251G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.257G>A
  hgvsp: ENSP00000252463.2:p.Ser86Asn
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4768
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16872
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser86Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

16-3142296-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142296
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142296
    reference: chr 16
allele count: 1
allele frequency: 8.71049789205951e-6
allele num: 114804
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.253A>C
  hgvsp: ENSP00000458879.1:p.Lys85Gln
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-765A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.253A>C
  hgvsp: ENSP00000458260.1:p.Lys85Gln
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.942A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+382A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.253A>C
  hgvsp: ENSP00000252463.2:p.Lys85Gln
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-467A>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+247A>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys85Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

16-3142298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142298
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142298
    reference: chr 16
allele count: 1
allele frequency: 8.749671887304227e-6
allele num: 114290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+380G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.251G>A
  hgvsp: ENSP00000458260.1:p.Gly84Asp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.251G>A
  hgvsp: ENSP00000458879.1:p.Gly84Asp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+245G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.940G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-469G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.251G>A
  hgvsp: ENSP00000252463.2:p.Gly84Asp
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-767G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3565
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7060
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly84Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

16-3142300-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142300
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142300
    reference: chr 16
allele count: 1
allele frequency: 8.760556470547009e-6
allele num: 114148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+378T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.249T>C
  hgvsp: ENST00000576483.1:c.249T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-471T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+243T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.249T>C
  hgvsp: ENST00000576985.1:c.249T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.249T>C
  hgvsp: ENST00000252463.2:c.249T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-769T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.938T>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8945
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala83Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

16-3142301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142301
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142301
    reference: chr 16
allele count: 1
allele frequency: 8.773776935495191e-6
allele num: 113976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.248C>T
  hgvsp: ENSP00000458879.1:p.Ala83Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-770C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.248C>T
  hgvsp: ENSP00000252463.2:p.Ala83Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.248C>T
  hgvsp: ENSP00000458260.1:p.Ala83Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+377C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+242C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-472C>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.937C>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11300
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5326
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5016
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16324
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala83Val
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-3142302-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142302
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142302
    reference: chr 16
allele count: 4
allele frequency: 3.518648838845883e-5
allele num: 113680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+241G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.247G>C
  hgvsp: ENSP00000252463.2:p.Ala83Pro
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.247G>C
  hgvsp: ENSP00000458879.1:p.Ala83Pro
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+376G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.247G>C
  hgvsp: ENSP00000458260.1:p.Ala83Pro
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-473G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.936G>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-771G>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13694
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16242
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala83Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

16-3142309-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142309
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142309
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 112936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-480T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.240T>C
  hgvsp: ENST00000252463.2:c.240T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.240T>C
  hgvsp: ENST00000576985.1:c.240T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+369T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.240T>C
  hgvsp: ENST00000576483.1:c.240T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.929T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-778T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+234T>C
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser80Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS

16-3142316-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142316
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142316
    reference: chr 16
allele count: 1
allele frequency: 8.946304281701229e-6
allele num: 111778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.233A>T
  hgvsp: ENSP00000458879.1:p.Asp78Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+227A>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-785A>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+362A>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.233A>T
  hgvsp: ENSP00000252463.2:p.Asp78Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.922A>T
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.233A>T
  hgvsp: ENSP00000458260.1:p.Asp78Val
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-487A>T
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5481
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp78Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

16-3142321-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142321
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142321
    reference: chr 16
allele count: 1
allele frequency: 9.002034459787913e-6
allele num: 111086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-492A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.232-4A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-786-4A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+222A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.917A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.232-4A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.232-4A>G
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+357A>G
  variant of: http://identifiers.org/hgnc/12997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
hgvs: c.232-4A>G
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

16-3142330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142330
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142330
    reference: chr 16
allele count: 1
allele frequency: 9.135256609358157e-6
allele num: 109466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.232-13G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.908G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+213G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.232-13G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-501G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+348G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.232-13G>A
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-786-13G>A
  variant of: http://identifiers.org/hgnc/12997
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4410
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4647
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4990
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-3142331-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3142331
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 3142331
    reference: chr 16
allele count: 1
allele frequency: 9.159354448698456e-6
allele num: 109178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458879
  ensembl transcript: ENST00000576985
  gene symbol: ZSCAN10
  hgvsc: ENST00000576985.1:c.232-14T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000458260
  ensembl transcript: ENST00000576483
  gene symbol: ZSCAN10
  hgvsc: ENST00000576483.1:c.232-14T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130182
  ensembl transcript: ENST00000571903
  gene symbol: ZSCAN10
  hgvsc: ENST00000571903.1:n.907T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000459520
  ensembl transcript: ENST00000575108
  gene symbol: ZSCAN10
  hgvsc: ENST00000575108.1:c.-786-14T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000440047
  ensembl transcript: ENST00000538082
  gene symbol: ZSCAN10
  hgvsc: ENST00000538082.2:c.253+212T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000252463
  ensembl transcript: ENST00000252463
  gene symbol: ZSCAN10
  hgvsc: ENST00000252463.2:c.232-14T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000461871
  ensembl transcript: ENST00000572548
  gene symbol: ZSCAN10
  hgvsc: ENST00000572548.1:c.96+347T>C
  variant of: http://identifiers.org/hgnc/12997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130182
  ensembl protein: ENSP00000460473
  ensembl transcript: ENST00000572431
  gene symbol: ZSCAN10
  hgvsc: ENST00000572431.1:c.-518-502T>C
  variant of: http://identifiers.org/hgnc/12997
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6955
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15134
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

16-3142344-G-A
type: Variant
location: Region
allele count: 1
allele frequency: 9.361718062498831e-6
allele num: 106818
alternate allele: A
canonical: false
consequence: non coding transcript exon
filter: PASS
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 138
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.614151272220286e-4
allele num: 11476
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.68e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

DP
type: SiteQuality
SIO_000300: 1.925038e6

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9890
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63774
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.918649270913277e-4
allele num: 10424
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.586e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.18e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.713837574067619e-5
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63794
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9890
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

QD
type: SiteQuality
SIO_000300: 8.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.137e0

DP
type: SiteQuality
SIO_000300: 1.925736e6

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.789e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.695570511817186e-5
allele num: 63890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.46e-1

FS
type: SiteQuality
SIO_000300: 6.851e0

VQSLOD
type: SiteQuality
SIO_000300: -2.281e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 1.92575e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e-1

QD
type: SiteQuality
SIO_000300: 3.023e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.328358208955224e-4
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.926054e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

QD
type: SiteQuality
SIO_000300: 1.204e1

FS
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

GenotypeQuality
all individuals: 7083
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 209
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165229550221394e-4
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563868384836732e-5
allele num: 63944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.57e-1

FS
type: SiteQuality
SIO_000300: 1.107e0

VQSLOD
type: SiteQuality
SIO_000300: 3.54e-1

QD
type: SiteQuality
SIO_000300: 4.1e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

DP
type: SiteQuality
SIO_000300: 1.927813e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11808
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East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560013728120808e-5
allele num: 64102
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740644038294169e-4
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
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MQRankSum
type: SiteQuality
SIO_000300: 7.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.079e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.184e0

FS
type: SiteQuality
SIO_000300: 6.904e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.044e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.23e-1

DP
type: SiteQuality
SIO_000300: 1.926035e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 12098
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Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.015434606011373e-4
allele num: 9848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.113421962078521e-5
allele num: 64238
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 832
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele num: 838
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European (Finnish)
type: Population
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allele num: 6464
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East Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.559624442434262e-5
allele num: 64118
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African
type: Population
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Latino
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
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South Asian
type: Population
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.313e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.928329e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64596
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
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African
type: Population
allele count: 1
allele frequency: 1.013376570733685e-4
allele num: 9868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.06e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.058e1

VQSLOD
type: SiteQuality
SIO_000300: -3.078e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.930359e6

GenotypeQuality
all individuals: 6957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4943
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4345
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64618
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.491424310216256e-4
allele num: 13410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.307e1

FS
type: SiteQuality
SIO_000300: 4.259e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 1.931944e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3301
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17060
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11326
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6982
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.374631268436578e-5
allele num: 13560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.63e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 2.235e0

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

DP
type: SiteQuality
SIO_000300: 1.932825e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

GenotypeQuality
all individuals: 614
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4981
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2592
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7126
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4345
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11316
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 213
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14526
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.797773654916512e-4
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65156
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

DP
type: SiteQuality
SIO_000300: 1.948925e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.318e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.869999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

QD
type: SiteQuality
SIO_000300: 9.98e0

GenotypeQuality
all individuals: 7118
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3578
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4352
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4976
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65234
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 1.952168e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.635e0

QD
type: SiteQuality
SIO_000300: 1.265e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.659e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18358
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11312
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7128
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65288
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319109461966605e-4
allele num: 8624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.251e0

QD
type: SiteQuality
SIO_000300: 1.209e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.055e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.954558e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 3.622e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4357
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11311
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4986
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65402
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.612881893929374e-5
allele num: 15122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

DP
type: SiteQuality
SIO_000300: 1.959575e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.447e0

VQSLOD
type: SiteQuality
SIO_000300: 6.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

QD
type: SiteQuality
SIO_000300: 1.24e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 107
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2295
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.055861141669723e-5
allele num: 65448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.501e1

FS
type: SiteQuality
SIO_000300: 5.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.256e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

DP
type: SiteQuality
SIO_000300: 1.963369e6

VQSLOD
type: SiteQuality
SIO_000300: 1.85e-1

GenotypeQuality
all individuals: 3592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5006
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11308
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 196
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.580292528016123e-5
allele num: 65498
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

DP
type: SiteQuality
SIO_000300: 1.963572e6

FS
type: SiteQuality
SIO_000300: 5.769e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

QD
type: SiteQuality
SIO_000300: 1.369e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.18e-1

GenotypeQuality
all individuals: 11315
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2288
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7244
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65650
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.507840772014475e-3
allele num: 9948
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.406970784213224e-5
allele num: 15608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.976e0

QD
type: SiteQuality
SIO_000300: 1.208e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-1

DP
type: SiteQuality
SIO_000300: 1.968944e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

GenotypeQuality
all individuals: 448
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11300
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5023
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4368
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.337135614702154e-5
allele num: 15780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.07e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

DP
type: SiteQuality
SIO_000300: 1.972237e6

VQSLOD
type: SiteQuality
SIO_000300: -3.92e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.02e-1

QD
type: SiteQuality
SIO_000300: 1.529e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.056e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2292
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.317917614354308e-5
allele num: 15828
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.118e0

QD
type: SiteQuality
SIO_000300: 1.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

FS
type: SiteQuality
SIO_000300: 2.386e0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.585e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.973499e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 77

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

Latino
type: Population
allele count: 76
allele frequency: 6.581226186352616e-3
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65936
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.226e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

DP
type: SiteQuality
SIO_000300: 1.985038e6

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.218e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516852228255923e-5
allele num: 65926
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.965e0

MQRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 1.265e1

DP
type: SiteQuality
SIO_000300: 1.984021e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.183527083848628e-5
allele num: 16172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.265e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 1.965e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.984021e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514646632940535e-5
allele num: 66022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16208
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.987733e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.322340919647004e-4
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66090
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.9899e6

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.664e0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.982e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.998000399920016e-5
allele num: 10002
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66100
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66100
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10002
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Latino
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South Asian
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allele count: 1
allele frequency: 6.146281499692685e-5
allele num: 16270
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.986019572598362e-5
allele num: 10014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8618
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16316
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.535421643032081e-5
allele num: 66146
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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BaseQRankSum
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 20

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 3
allele frequency: 2.597852441981296e-4
allele num: 11548
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.978048293753742e-5
allele num: 10022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.720759394177575e-4
allele num: 66158
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.09e-2

MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

QD
type: SiteQuality
SIO_000300: 1.318e1

DP
type: SiteQuality
SIO_000300: 1.99392e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.67e-1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 842
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variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.751e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

DP
type: SiteQuality
SIO_000300: 1.993992e6

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.588e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

QD
type: SiteQuality
SIO_000300: 1.007e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 14

South Asian
type: Population
allele count: 10
allele frequency: 6.116207951070336e-4
allele num: 16350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.644681839294008e-4
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66172
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.308e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

DP
type: SiteQuality
SIO_000300: 1.994854e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.216e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.126e0

MQRankSum
type: SiteQuality
SIO_000300: 8.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 2.447e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.123e-1

DP
type: SiteQuality
SIO_000300: 1.996152e6

GenotypeQuality
all individuals: 182
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.912767644726408e-5
allele num: 10088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66238
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.578e0

FS
type: SiteQuality
SIO_000300: 8.577999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -3.526e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-1

DP
type: SiteQuality
SIO_000300: 1.997239e6

QD
type: SiteQuality
SIO_000300: 1.745e1

GenotypeQuality
all individuals: 2318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7477
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variant carriers: 0

GenotypeQuality
all individuals: 183
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GenotypeQuality
all individuals: 3313
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GenotypeQuality
all individuals: 110
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GenotypeQuality
all individuals: 714
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variant carriers: 0

GenotypeQuality
all individuals: 5054
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variant carriers: 0

GenotypeQuality
all individuals: 21601
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GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.895111814763506e-5
allele num: 10106
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509251713000694e-5
allele num: 66258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.32e-1

DP
type: SiteQuality
SIO_000300: 1.997713e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

FS
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 1.19e1

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.9e-1

GenotypeQuality
all individuals: 706
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11237
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variant carriers: 2

GenotypeQuality
all individuals: 78
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21641
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GenotypeQuality
all individuals: 3682
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018959062915107e-5
allele num: 66248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.997799e6

FS
type: SiteQuality
SIO_000300: 2.601e0

MQ
type: SiteQuality
SIO_000300: 5.269e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.874e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.82e0

VQSLOD
type: SiteQuality
SIO_000300: -2.306e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 5.51e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3315
bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2320
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GenotypeQuality
all individuals: 3682
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509479531457553e-5
allele num: 66248
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.601e0

MQ
type: SiteQuality
SIO_000300: 5.269e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 1.997799e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.874e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 2324
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
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East Asian
type: Population
allele count: 7
allele frequency: 8.128193218764515e-4
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66250
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.751e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

DP
type: SiteQuality
SIO_000300: 1.997746e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 1.2598e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.207765934961804e-4
allele num: 66238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.996594e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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Other
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East Asian
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QD
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VQSLOD
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FS
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66168
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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ReadPosRankSum
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MQRankSum
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QD
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DP
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InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
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Latino
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allele frequency: 1.731601731601732e-3
allele num: 11550
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African
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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VQSLOD
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MQ
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ClippingRankSum
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QD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.024071610015725e-5
allele num: 66136
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Latino
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allele num: 11548
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South Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

FS
type: SiteQuality
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
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South Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele num: 6548
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East Asian
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Other
type: Population
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DP
type: SiteQuality
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10076
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Other
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allele num: 900
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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Latino
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European (Finnish)
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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ClippingRankSum
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FS
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ReadPosRankSum
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MQRankSum
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QD
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MQ
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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allele num: 66050
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South Asian
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African
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East Asian
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Other
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ClippingRankSum
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DP
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MQ
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MQRankSum
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BaseQRankSum
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QD
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FS
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65976
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
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MQRankSum
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MQ
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QD
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BaseQRankSum
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DP
type: SiteQuality
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ClippingRankSum
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SIO_000300: -8.89e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.516760200212346e-5
allele num: 65930
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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QD
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
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DP
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VQSLOD
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SIO_000300: 5.07e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65928
num of homozygotes: 0

East Asian
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allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16096
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.11e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.65e0

BaseQRankSum
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SIO_000300: -2.396e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.6e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
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SIO_000300: -1.068e0

DP
type: SiteQuality
SIO_000300: 1.990478e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.527743827914935e-5
allele num: 65456
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15388
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.049e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 4.11e0

QD
type: SiteQuality
SIO_000300: 1.213e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

DP
type: SiteQuality
SIO_000300: 1.968789e6

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65330
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9818
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South Asian
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allele frequency: 1.320829480914014e-4
allele num: 15142
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.963553e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.109e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.646284726837697e-5
allele num: 15046
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.127826459954654e-5
allele num: 65276
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

InbreedingCoeff
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MQRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
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QD
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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allele frequency: 1.023122570083896e-4
allele num: 9774
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11520
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.536334306345061e-5
allele num: 65090
num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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allele num: 8590
num of homozygotes: 0

Latino
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allele num: 11520
num of homozygotes: 0

Other
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South Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.538745614574998e-5
allele num: 64988
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele num: 8590
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South Asian
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FS
type: SiteQuality
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

DP
type: SiteQuality
SIO_000300: 1.950195e6

QD
type: SiteQuality
SIO_000300: 1.246e1

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5032
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3673
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11313
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.616236843724996e-5
allele num: 64988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.472222222222222e-4
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.228e0

FS
type: SiteQuality
SIO_000300: 1.743e0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.246e1

DP
type: SiteQuality
SIO_000300: 1.950195e6

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11306
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4422
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539740707664829e-5
allele num: 64946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.876633200385091e-5
allele num: 14542
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.92e-1

DP
type: SiteQuality
SIO_000300: 1.947562e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.951e0

VQSLOD
type: SiteQuality
SIO_000300: 5.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.179e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.99e-1

GenotypeQuality
all individuals: 4690
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3328
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 409
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variant carriers: 0

GenotypeQuality
all individuals: 5028
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variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11310
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 4419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.39366347672582e-4
allele num: 64578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9596
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.258e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.930737e6

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4418
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11304
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variant carriers: 1

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 217
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variant carriers: 0

GenotypeQuality
all individuals: 3574
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variant carriers: 0

GenotypeQuality
all individuals: 7091
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551927493947483e-5
allele num: 64436
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -1.368e0

VQSLOD
type: SiteQuality
SIO_000300: -6.977e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.899e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 1.945e0

DP
type: SiteQuality
SIO_000300: 1.926882e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.06e-1

GenotypeQuality
all individuals: 5019
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
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variant carriers: 0

GenotypeQuality
all individuals: 50
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GenotypeQuality
all individuals: 3568
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
all individuals: 16636
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variant carriers: 0

GenotypeQuality
all individuals: 7073
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variant carriers: 0

GenotypeQuality
all individuals: 4420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11303
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5027
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.410701052319549e-5
allele num: 13494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.97e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 7.21e-1

FS
type: SiteQuality
SIO_000300: 4.603e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.75e-1

DP
type: SiteQuality
SIO_000300: 1.921186e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.17e-1

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 5101
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11302
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5022
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16441
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559867723217071e-5
allele num: 64108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
type: SiteQuality
SIO_000300: 1.917995e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.296e0

FS
type: SiteQuality
SIO_000300: 1.828e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e-2

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 87
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7059
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11300
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5016
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169864295741694e-4
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9454
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
SIO_000300: 3.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.21e1

MQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 1.915183e6

GenotypeQuality
all individuals: 167
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3328
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64022
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9414
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.659313725490196e-5
allele num: 13056
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.257e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.445e0

QD
type: SiteQuality
SIO_000300: 8.050000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 1.913638e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.551e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.294e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 11300
bin: 9.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.258801439524332e-5
allele num: 63910
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.912107e6

QD
type: SiteQuality
SIO_000300: 1.239e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 11296
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3328
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7045
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5005
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5629
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3562
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15929
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e-1

QD
type: SiteQuality
SIO_000300: 2.23e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.903651e6

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 11297
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7022
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5000
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15601
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63194
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177301624676242e-4
allele num: 8494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11990
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.057e0

DP
type: SiteQuality
SIO_000300: 1.894874e6

MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
SIO_000300: 4.3e-2

FS
type: SiteQuality
SIO_000300: 9.85e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
all individuals: 183
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4993
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3326
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11297
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588865232450984e-5
allele num: 62938
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.413e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 7.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 9.399999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.889492e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3326
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3555
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11296
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 349
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.603592046183451e-5
allele num: 62360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.25e-1

FS
type: SiteQuality
SIO_000300: 3.291e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.129e1

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

DP
type: SiteQuality
SIO_000300: 1.877773e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.57e-1

GenotypeQuality
all individuals: 11296
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3555
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3326
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4410
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8946
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.606787068577672e-5
allele num: 62236
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.47e-1

FS
type: SiteQuality
SIO_000300: 2.61e0

DP
type: SiteQuality
SIO_000300: 1.874911e6

MQRankSum
type: SiteQuality
SIO_000300: 9.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

QD
type: SiteQuality
SIO_000300: 1.169e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2