12-121678650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678650
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678650
    reference: chr 12
allele count: 1
allele frequency: 8.712926497752064e-6
allele num: 114772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1576C>T
  hgvsp: ENSP00000336634.3:p.Leu526Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1619C>T
  hgvsp: ENSP00000312741.5:p.Pro540Leu
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1619C>T
  hgvsp: ENSP00000384591.4:p.Pro540Leu
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1490C>T
  hgvsp: ENSP00000321230.3:p.Pro497Leu
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1576C>T
  hgvsp: ENSP00000388368.2:p.Leu526Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1619C>T
  hgvsp: ENSP00000384600.3:p.Pro540Leu
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1447C>T
  hgvsp: ENSP00000445944.1:p.Leu483Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-305C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-305C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro540Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

12-121678659-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678659
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678659
    reference: chr 12
allele count: 1
allele frequency: 8.726460373143445e-6
allele num: 114594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-314G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1610G>A
  hgvsp: ENSP00000312741.5:p.Arg537Gln
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1567G>A
  hgvsp: ENSP00000388368.2:p.Glu523Lys
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1438G>A
  hgvsp: ENSP00000445944.1:p.Glu480Lys
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1610G>A
  hgvsp: ENSP00000384600.3:p.Arg537Gln
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1481G>A
  hgvsp: ENSP00000321230.3:p.Arg494Gln
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1567G>A
  hgvsp: ENSP00000336634.3:p.Glu523Lys
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1610G>A
  hgvsp: ENSP00000384591.4:p.Arg537Gln
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-314G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3042
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg537Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

12-121678660-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678660
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678660
    reference: chr 12
allele count: 2
allele frequency: 1.745810055865922e-5
allele num: 114560
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-315C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1609C>T
  hgvsp: ENSP00000312741.5:p.Arg537Ter
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1566C>T
  hgvsp: ENST00000412367.2:c.1566C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-315C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1609C>T
  hgvsp: ENSP00000384600.3:p.Arg537Ter
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1437C>T
  hgvsp: ENST00000538733.1:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1566C>T
  hgvsp: ENST00000337174.3:c.1566C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1480C>T
  hgvsp: ENSP00000321230.3:p.Arg494Ter
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1609C>T
  hgvsp: ENSP00000384591.4:p.Arg537Ter
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg537Ter
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

12-121678666-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678666
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678666
    reference: chr 12
allele count: 1
allele frequency: 8.741870060843416e-6
allele num: 114392
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1603A>G
  hgvsp: ENSP00000312741.5:p.Arg535Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-321A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1431A>G
  hgvsp: ENST00000538733.1:c.1431A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1474A>G
  hgvsp: ENSP00000321230.3:p.Arg492Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1603A>G
  hgvsp: ENSP00000384591.4:p.Arg535Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1603A>G
  hgvsp: ENSP00000384600.3:p.Arg535Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-321A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1560A>G
  hgvsp: ENST00000337174.3:c.1560A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1560A>G
  hgvsp: ENST00000412367.2:c.1560A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg535Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-121678678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678678
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678678
    reference: chr 12
allele count: 1
allele frequency: 8.772237622372715e-6
allele num: 113996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-333G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-333G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1597-6G>A
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

12-121678685-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678685
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678685
    reference: chr 12
allele count: 1
allele frequency: 8.795229467536807e-6
allele num: 113698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-340G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-13G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-340G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-13G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-13G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-13G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-13G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-13G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-13G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2447
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

12-121678696-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678696
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678696
    reference: chr 12
allele count: 1
allele frequency: 8.835639435225927e-6
allele num: 113178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-24G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-24G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-24G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-24G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-24G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-351G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-351G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-24G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-24G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33764
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37481
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2964
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6613
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

12-121678700-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678700
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678700
    reference: chr 12
allele count: 35
allele frequency: 3.096249115357396e-4
allele num: 113040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-28T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-28T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-28T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-355T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-28T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-355T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-28T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-28T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-28T>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

12-121678703-ACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678703
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678701
    reference: chr 12
allele count: 1
allele frequency: 8.864776696275021e-6
allele num: 112806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-33_1425-32delAG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-360_958-359delAG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-33_1554-32delAG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-33_1597-32delAG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-33_1554-32delAG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-33_1597-32delAG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-33_1468-32delAG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-33_1597-32delAG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-360_1597-359delAG
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6492
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: ACT
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

12-121678708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678708
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678708
    reference: chr 12
allele count: 1
allele frequency: 8.893948557401545e-6
allele num: 112436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-363C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-36C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-36C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-363C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-36C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-36C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-36C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-36C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-36C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

12-121678714-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678714
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678714
    reference: chr 12
allele count: 2
allele frequency: 1.788844764051376e-5
allele num: 111804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-369A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-42A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-42A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-369A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-42A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-42A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-42A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-42A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-42A>G
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6222
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

12-121678717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678717
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678717
    reference: chr 12
allele count: 1
allele frequency: 8.98391878537418e-6
allele num: 111310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-45G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-372G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-45G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-372G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-45G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-45G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-45G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-45G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-45G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

12-121678719-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678719
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678719
    reference: chr 12
allele count: 6
allele frequency: 5.403652869339674e-5
allele num: 111036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-47C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-374C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-374C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-47C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-47C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-47C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-47C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-47C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-47C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4929
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1929
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1919
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-121678720-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678720
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678720
    reference: chr 12
allele count: 1
allele frequency: 9.020548810189612e-6
allele num: 110858
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-48G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-375G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-48G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-48G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-375G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-48G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-48G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-48G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-48G>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6135
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

12-121678720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121678720
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121678720
    reference: chr 12
allele count: 2
allele frequency: 1.804109762037922e-5
allele num: 110858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1425-48G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1597-48G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.958-375G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1468-48G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1554-48G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1597-48G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1597-375G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1597-48G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1554-48G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33191
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6135
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ

12-121681885-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681885
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681885
    reference: chr 12
allele count: 2
allele frequency: 1.927042182953385e-5
allele num: 103786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+491G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+491G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1058G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1058G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+491G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+491G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.*42G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+491G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.*42G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+491G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1058G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11483
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

12-121681888-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681888
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681888
    reference: chr 12
allele count: 5
allele frequency: 4.820763994677876e-5
allele num: 103718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1055A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.*39A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1055A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.*39A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+488A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+488A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+488A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+488A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+488A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1055A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+488A>G
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6842
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3154
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

12-121681889-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681889
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681890
    reference: chr 12
allele count: 5
allele frequency: 4.81871976253349e-5
allele num: 103762
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1053dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.*37dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.*37dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+486dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+486dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+486dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1053dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+486dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+486dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+486dupT
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1053dupT
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11366
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16445
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-121681891-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681891
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681891
    reference: chr 12
allele count: 2
allele frequency: 1.933114247052001e-5
allele num: 103460
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1052G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+485G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+485G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+485G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1052G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+485G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+485G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+485G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.*36G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1052G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5723
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8030
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

12-121681892-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681892
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681892
    reference: chr 12
allele count: 5
allele frequency: 4.828398709851864e-5
allele num: 103554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1051C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+484C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1051C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+484C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.*35C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+484C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.*35C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+484C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1051C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+484C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+484C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7936
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5286
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

12-121681892-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681892
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681892
    reference: chr 12
allele count: 3
allele frequency: 2.897039225911119e-5
allele num: 103554
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.*35C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1051C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.*35C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+484C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1051C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+484C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1051C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+484C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+484C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+484C>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+484C>A
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17690
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

12-121681917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681917
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681917
    reference: chr 12
allele count: 1
allele frequency: 9.801038910124473e-6
allele num: 102030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+459C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+459C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.*10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1026C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+459C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.*10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+459C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1026C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+459C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1026C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+459C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8883
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5556
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

12-121681919-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681919
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681919
    reference: chr 12
allele count: 2
allele frequency: 1.963903454506176e-5
allele num: 101838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1024G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.*8G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1024G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+457G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+457G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1024G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+457G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.*8G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+457G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+457G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+457G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11116
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

12-121681927-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681927
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681927
    reference: chr 12
allele count: 2
allele frequency: 1.984166352506994e-5
allele num: 100798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+449G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+449G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+449G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1016G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1602G>A
  hgvsp: ENST00000392473.2:c.1602G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1473G>A
  hgvsp: ENST00000446440.2:c.1473G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1016G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+449G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+449G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1016G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+449G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9407
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17121
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14720
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ter491Ter
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

12-121681938-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681938
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681938
    reference: chr 12
allele count: 246
allele frequency: 2.479588751133958e-3
allele num: 99210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1005G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+438G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+438G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1597-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+438G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+438G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1468-6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1005G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1005G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+438G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+438G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13449
  bin: 2.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7877
  bin: 2.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 15105
  bin: 1.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 1.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10016
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 9.75e1
  variant carriers: 221
hgvs: c.1468-6G>A
num of homozygotes: 6
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/12-121681944-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681944
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681944
    reference: chr 12
allele count: 1
allele frequency: 1.021951518619957e-5
allele num: 97852
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+432T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+432T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+432T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+999T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+432T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+999T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+999T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+432T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1468-12T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1597-12T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+432T>G
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

12-121681947-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681947
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681947
    reference: chr 12
allele count: 49
allele frequency: 5.022550225502255e-4
allele num: 97560
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+429C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+996C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+429C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1468-15C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+429C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+429C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+429C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+996C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+996C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+429C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1597-15C>G
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6854
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 17174
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10531
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10674
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/12-121681973-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681973
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681973
    reference: chr 12
allele count: 2
allele frequency: 2.170515714533773e-5
allele num: 92144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+403G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+970G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+403G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+970G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+403G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+970G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1597-41G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+403G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1468-41G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+403G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+403G>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10981
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

12-121681973-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681973
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681973
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 92144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+403G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+970G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+403G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+970G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+403G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+403G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+403G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+403G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1468-41G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1597-41G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+970G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12266
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10981
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7623
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

12-121681978-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121681978
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121681978
    reference: chr 12
allele count: 8
allele frequency: 8.81698150638129e-5
allele num: 90734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+398G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+398G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+398G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+398G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1468-46G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+965G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+965G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+398G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+965G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+398G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1597-46G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12856
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17743
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13424
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

12-121682326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682326
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682326
    reference: chr 12
allele count: 1
allele frequency: 5.103603143819537e-5
allele num: 19594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+50C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+50C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+50C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+50C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+50C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+617C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+50C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+617C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+617C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+50C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+50C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35357
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9753
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

12-121682326-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682326
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682325
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 19594
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+49delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+49delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+616delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+49delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+616delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+616delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+49delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+49delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+49delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+49delG
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+49delG
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9753
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: GC
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

12-121682329-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682329
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682329
    reference: chr 12
allele count: 1
allele frequency: 5.062265870203503e-5
allele num: 19754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+614G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+47G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+47G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+614G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+47G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+614G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+47G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+47G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+47G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+47G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+47G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4502
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

12-121682353-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682353
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682353
    reference: chr 12
allele count: 1
allele frequency: 4.878048780487805e-5
allele num: 20500
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+23G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+23G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+23G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+23G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+23G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+23G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+23G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+590G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+23G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+590G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+590G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP

12-121682354-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682354
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682354
    reference: chr 12
allele count: 3
allele frequency: 1.459427904261529e-4
allele num: 20556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+22C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+589C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+22C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+22C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+589C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+22C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+589C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+22C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+22C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+22C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+22C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30100
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16771
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

12-121682366-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682366
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682366
    reference: chr 12
allele count: 314
allele frequency: 1.53921568627451e-2
allele num: 20400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+577G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+577G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+10G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+10G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+577G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+10G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+10G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+10G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+10G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+10G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+10G>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17817
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.75e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 6.75e1
  variant carriers: 6
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

12-121682366-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682366
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682366
    reference: chr 12
allele count: 1
allele frequency: 4.901960784313725e-5
allele num: 20400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+10G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+577G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+10G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+10G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+10G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+10G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+577G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+10G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+10G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+577G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+10G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3436
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

12-121682367-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682367
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682367
    reference: chr 12
allele count: 1
allele frequency: 4.773725415314111e-5
allele num: 20948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+9C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+9C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+9C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+9C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+9C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+576C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+576C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+9C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+9C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+9C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+576C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17822
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/12-121682370-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682370
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682370
    reference: chr 12
allele count: 1
allele frequency: 4.796163069544364e-5
allele num: 20850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+573G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+6G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+6G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+6G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+6G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+6G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+6G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+573G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+6G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+573G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+6G>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18384
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28607
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1596+6G>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

12-121682370-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682370
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682370
    reference: chr 12
allele count: 7
allele frequency: 3.357314148681055e-4
allele num: 20850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+6G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+6G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+6G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+6G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+573G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+6G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+573G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+6G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+6G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+6G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+573G>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1596+6G>C
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

12-121682370-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682370
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682370
    reference: chr 12
allele count: 1
allele frequency: 4.796163069544364e-5
allele num: 20850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+573G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+6G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+573G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+573G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 28607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1596+6G>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

12-121682371-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682371
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682371
    reference: chr 12
allele count: 2
allele frequency: 9.534706331045004e-5
allele num: 20976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+572C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1596+5C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1596+5C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1596+5C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1467+5C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1596+5C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1467+5C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+572C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.957+5C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1596+5C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+572C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18639
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1596+5C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

12-121682381-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682381
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682381
    reference: chr 12
allele count: 1
allele frequency: 4.622781065088757e-5
allele num: 21632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1591C>T
  hgvsp: ENSP00000376266.2:p.Leu531Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1591C>T
  hgvsp: ENSP00000384591.4:p.Leu531Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1591C>T
  hgvsp: ENSP00000376265.2:p.Leu531Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+562C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1591C>T
  hgvsp: ENSP00000384600.3:p.Leu531Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1462C>T
  hgvsp: ENSP00000388273.2:p.Leu488Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+562C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1462C>T
  hgvsp: ENSP00000321230.3:p.Leu488Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.952C>T
  hgvsp: ENSP00000441352.1:p.Leu318Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1591C>T
  hgvsp: ENSP00000312741.5:p.Leu531Phe
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+562C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu531Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

12-121682387-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682387
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682387
    reference: chr 12
allele count: 1
allele frequency: 4.561627588723656e-5
allele num: 21922
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1585T>C
  hgvsp: ENSP00000384600.3:p.Ser529Pro
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1456T>C
  hgvsp: ENSP00000388273.2:p.Ser486Pro
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1585T>C
  hgvsp: ENSP00000376265.2:p.Ser529Pro
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+556T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1456T>C
  hgvsp: ENSP00000321230.3:p.Ser486Pro
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.946T>C
  hgvsp: ENSP00000441352.1:p.Ser316Pro
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1585T>C
  hgvsp: ENSP00000376266.2:p.Ser529Pro
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+556T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1585T>C
  hgvsp: ENSP00000312741.5:p.Ser529Pro
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1585T>C
  hgvsp: ENSP00000384591.4:p.Ser529Pro
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+556T>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24978
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser529Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP

12-121682388-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682388
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682388
    reference: chr 12
allele count: 2
allele frequency: 9.110787172011662e-5
allele num: 21952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+555G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1455G>A
  hgvsp: ENST00000347034.2:c.1455G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1584G>A
  hgvsp: ENST00000402834.4:c.1584G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1455G>A
  hgvsp: ENST00000446440.2:c.1455G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1584G>A
  hgvsp: ENST00000324774.5:c.1584G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1584G>A
  hgvsp: ENST00000392474.2:c.1584G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.945G>A
  hgvsp: ENST00000545538.1:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1584G>A
  hgvsp: ENST00000392473.2:c.1584G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+555G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1584G>A
  hgvsp: ENST00000404169.3:c.1584G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+555G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu528Leu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

12-121682395-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682395
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682395
    reference: chr 12
allele count: 1
allele frequency: 4.492362982929021e-5
allele num: 22260
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1577A>G
  hgvsp: ENSP00000312741.5:p.Glu526Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1577A>G
  hgvsp: ENSP00000384591.4:p.Glu526Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+548A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1448A>G
  hgvsp: ENSP00000388273.2:p.Glu483Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.938A>G
  hgvsp: ENSP00000441352.1:p.Glu313Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+548A>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1577A>G
  hgvsp: ENSP00000384600.3:p.Glu526Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1448A>G
  hgvsp: ENSP00000321230.3:p.Glu483Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1577A>G
  hgvsp: ENSP00000376265.2:p.Glu526Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1577A>G
  hgvsp: ENSP00000376266.2:p.Glu526Gly
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+548A>G
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23777
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu526Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/12-121682397-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682397
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682397
    reference: chr 12
allele count: 1
allele frequency: 4.475875033569063e-5
allele num: 22342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1446T>G
  hgvsp: ENSP00000321230.3:p.Cys482Trp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.936T>G
  hgvsp: ENSP00000441352.1:p.Cys312Trp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1575T>G
  hgvsp: ENSP00000312741.5:p.Cys525Trp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1575T>G
  hgvsp: ENSP00000384591.4:p.Cys525Trp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1446T>G
  hgvsp: ENSP00000388273.2:p.Cys482Trp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1575T>G
  hgvsp: ENSP00000376265.2:p.Cys525Trp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+546T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1575T>G
  hgvsp: ENSP00000376266.2:p.Cys525Trp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+546T>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1575T>G
  hgvsp: ENSP00000384600.3:p.Cys525Trp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+546T>G
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23474
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys525Trp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

12-121682400-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682400
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682400
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 22414
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.933A>T
  hgvsp: ENSP00000441352.1:p.Glu311Asp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1572A>T
  hgvsp: ENSP00000384600.3:p.Glu524Asp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1443A>T
  hgvsp: ENSP00000388273.2:p.Glu481Asp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1443A>T
  hgvsp: ENSP00000321230.3:p.Glu481Asp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1572A>T
  hgvsp: ENSP00000384591.4:p.Glu524Asp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1572A>T
  hgvsp: ENSP00000376265.2:p.Glu524Asp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1572A>T
  hgvsp: ENSP00000312741.5:p.Glu524Asp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1572A>T
  hgvsp: ENSP00000376266.2:p.Glu524Asp
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+543A>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+543A>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+543A>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24243
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23358
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu524Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

12-121682432-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682432
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682432
    reference: chr 12
allele count: 1
allele frequency: 4.608719697667988e-5
allele num: 21698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1554-14T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1425-14T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1425-14T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1554-14T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1554-14T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1554-14T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+511T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+511T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.915-14T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1554-14T>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+511T>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26706
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3793
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26677
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS

12-121682445-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682445
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682445
    reference: chr 12
allele count: 1
allele frequency: 4.842615012106537e-5
allele num: 20650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+498C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1425-27C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1554-27C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+498C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1554-27C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1554-27C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1425-27C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1554-27C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+498C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.915-27C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1554-27C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

12-121682452-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682452
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682452
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 19694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1425-34T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1554-34T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1554-34T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+491T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1554-34T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.915-34T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1425-34T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+491T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1554-34T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1554-34T>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+491T>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17142
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11026
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

12-121682458-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682458
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682458
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 18608
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1425-40C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1425-40C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+485C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1554-40C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1554-40C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+485C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.915-40C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1554-40C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+485C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1554-40C>G
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1554-40C>G
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17019
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28931
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/12-121682461-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682461
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682461
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 18530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1554-43G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1425-43G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.915-43G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1554-43G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+482G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1425-43G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1554-43G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1554-43G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1554-43G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+482G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+482G>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17372
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

12-121682461-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682461
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682461
    reference: chr 12
allele count: 2037
allele frequency: 1.099298434970318e-1
allele num: 18530
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1554-43G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1554-43G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+482G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+482G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1554-43G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1425-43G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1425-43G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1554-43G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.915-43G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+482G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1554-43G>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.75e1
  variant carriers: 237
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.75e1
  variant carriers: 287
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 1.25e1
  variant carriers: 821
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 27292
  bin: 2.5e0
  variant carriers: 712
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 17372
  bin: 7.5e0
  variant carriers: 2690
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 6488
  bin: 2.5e0
  variant carriers: 5
num of homozygotes: 128
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

12-121682462-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682462
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682462
    reference: chr 12
allele count: 33
allele frequency: 1.806635278659805e-3
allele num: 18266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1554-44G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1554-44G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1554-44G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1425-44G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1554-44G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.915-44G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+481G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+481G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1554-44G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1425-44G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+481G>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16654
  bin: 7.5e0
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29234
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

12-121682466-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682466
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682466
    reference: chr 12
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1425-48C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1554-48C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1554-48C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1554-48C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1425-48C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.915-48C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+477C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1554-48C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+477C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+477C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1554-48C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16751
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29009
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

12-121682905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682905
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682905
    reference: chr 12
allele count: 2
allele frequency: 7.39316871211001e-5
allele num: 27052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553+38G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424+38G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/12-121682916-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682916
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682916
    reference: chr 12
allele count: 8
allele frequency: 2.800336040324839e-4
allele num: 28568
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553+27G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553+27G>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27148
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

12-121682916-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682916
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682916
    reference: chr 12
allele count: 2
allele frequency: 7.000840100812098e-5
allele num: 28568
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424+27G>C
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+27G>C
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-121682916-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682916
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682916
    reference: chr 12
allele count: 1
allele frequency: 3.500420050406049e-5
allele num: 28568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553+27G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+27G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27148
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

12-121682930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682930
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682930
    reference: chr 12
allele count: 27
allele frequency: 8.381969452377995e-4
allele num: 32212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424+13C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553+13C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 32300
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10919
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

12-121682933-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682933
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682933
    reference: chr 12
allele count: 22
allele frequency: 6.525091944477399e-4
allele num: 33716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553+10C>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+10C>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5176
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 33213
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/12-121682935-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682935
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682935
    reference: chr 12
allele count: 1
allele frequency: 2.856979601165648e-5
allele num: 35002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553+8G>T
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553+8G>T
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1553+8G>T
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

12-121682942-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682942
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682942
    reference: chr 12
allele count: 2
allele frequency: 5.085176709890669e-5
allele num: 39330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553+1G>A
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553+1G>A
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1553+1G>A
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

12-121682943-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682943
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682943
    reference: chr 12
allele count: 4
allele frequency: 9.956688405436352e-5
allele num: 40174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1424C>T
  hgvsp: ENSP00000445944.1:p.Thr475Met
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1424C>T
  hgvsp: ENSP00000388273.2:p.Thr475Ile
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1553C>T
  hgvsp: ENSP00000336634.3:p.Thr518Met
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1553C>T
  hgvsp: ENSP00000384600.3:p.Thr518Ile
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1553C>T
  hgvsp: ENSP00000384591.4:p.Thr518Ile
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1553C>T
  hgvsp: ENSP00000376265.2:p.Thr518Ile
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1553C>T
  hgvsp: ENSP00000312741.5:p.Thr518Ile
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1424C>T
  hgvsp: ENSP00000321230.3:p.Thr475Ile
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1553C>T
  hgvsp: ENSP00000388368.2:p.Thr518Met
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1553C>T
  hgvsp: ENSP00000376266.2:p.Thr518Ile
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.914C>T
  hgvsp: ENSP00000441352.1:p.Thr305Ile
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34433
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr518Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

12-121682954-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682954
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682954
    reference: chr 12
allele count: 1
allele frequency: 2.09564524917222e-5
allele num: 47718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1542A>C
  hgvsp: ENST00000402834.4:c.1542A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1542A>C
  hgvsp: ENST00000404169.3:c.1542A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1413A>C
  hgvsp: ENST00000347034.2:c.1413A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1542A>C
  hgvsp: ENST00000337174.3:c.1542A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1542A>C
  hgvsp: ENST00000392474.2:c.1542A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1542A>C
  hgvsp: ENST00000412367.2:c.1542A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1542A>C
  hgvsp: ENST00000324774.5:c.1542A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.903A>C
  hgvsp: ENST00000545538.1:c.903A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1413A>C
  hgvsp: ENST00000538733.1:c.1413A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1413A>C
  hgvsp: ENST00000446440.2:c.1413A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1542A>C
  hgvsp: ENST00000392473.2:c.1542A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly514Gly
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD

12-121682960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682960
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682960
    reference: chr 12
allele count: 4
allele frequency: 7.776049766718506e-5
allele num: 51440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.897G>A
  hgvsp: ENST00000545538.1:c.897G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1407G>A
  hgvsp: ENST00000347034.2:c.1407G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1536G>A
  hgvsp: ENST00000392473.2:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1536G>A
  hgvsp: ENST00000337174.3:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1407G>A
  hgvsp: ENST00000538733.1:c.1407G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1536G>A
  hgvsp: ENST00000402834.4:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1536G>A
  hgvsp: ENST00000412367.2:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1536G>A
  hgvsp: ENST00000324774.5:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1536G>A
  hgvsp: ENST00000404169.3:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1536G>A
  hgvsp: ENST00000392474.2:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1407G>A
  hgvsp: ENST00000446440.2:c.1407G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4951
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala512Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

12-121682961-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 121682961
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 121682961
    reference: chr 12
allele count: 1
allele frequency: 1.901068400441048e-5
allele num: 52602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000336634
  ensembl transcript: ENST00000337174
  gene symbol: CAMKK2
  hgvsc: ENST00000337174.3:c.1535C>T
  hgvsp: ENSP00000336634.3:p.Ala512Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000441352
  ensembl transcript: ENST00000545538
  gene symbol: CAMKK2
  hgvsc: ENST00000545538.1:c.896C>T
  hgvsp: ENSP00000441352.1:p.Ala299Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000321230
  ensembl transcript: ENST00000347034
  gene symbol: CAMKK2
  hgvsc: ENST00000347034.2:c.1406C>T
  hgvsp: ENSP00000321230.3:p.Ala469Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388273
  ensembl transcript: ENST00000446440
  gene symbol: CAMKK2
  hgvsc: ENST00000446440.2:c.1406C>T
  hgvsp: ENSP00000388273.2:p.Ala469Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376266
  ensembl transcript: ENST00000392474
  gene symbol: CAMKK2
  hgvsc: ENST00000392474.2:c.1535C>T
  hgvsp: ENSP00000376266.2:p.Ala512Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384591
  ensembl transcript: ENST00000402834
  gene symbol: CAMKK2
  hgvsc: ENST00000402834.4:c.1535C>T
  hgvsp: ENSP00000384591.4:p.Ala512Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000376265
  ensembl transcript: ENST00000392473
  gene symbol: CAMKK2
  hgvsc: ENST00000392473.2:c.1535C>T
  hgvsp: ENSP00000376265.2:p.Ala512Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000445944
  ensembl transcript: ENST00000538733
  gene symbol: CAMKK2
  hgvsc: ENST00000538733.1:c.1406C>T
  hgvsp: ENSP00000445944.1:p.Ala469Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000384600
  ensembl transcript: ENST00000404169
  gene symbol: CAMKK2
  hgvsc: ENST00000404169.3:c.1535C>T
  hgvsp: ENSP00000384600.3:p.Ala512Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000388368
  ensembl transcript: ENST00000412367
  gene symbol: CAMKK2
  hgvsc: ENST00000412367.2:c.1535C>T
  hgvsp: ENSP00000388368.2:p.Ala512Val
  variant of: http://identifiers.org/hgnc/1470
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110931
  ensembl protein: ENSP00000312741
  ensembl transcript: ENST00000324774
  gene symbol: CAMKK2
  hgvsc: ENST00000324774.5:c.1535C>T
  hgvsp: ENSP00000312741.5:p.Ala512Val
  variant of: http://identifiers.org/hgnc/1470
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala512Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

GenotypeQuality
all individuals: 3047
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2079
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16266
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62406
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.131477709889115e-4
allele num: 8838
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.1e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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SIO_000300: 2.7e-2

InbreedingCoeff
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SIO_000300: -2.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 3.35e0

FS
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16240
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8402
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.604672807214609e-5
allele num: 62318
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

MQ
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SIO_000300: 5.941e1

InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

FS
type: SiteQuality
SIO_000300: 1.892e0

DP
type: SiteQuality
SIO_000300: 1.421277e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8790
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.605136436597111e-5
allele num: 62300
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.159911297277319e-5
allele num: 16234
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.989e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

BaseQRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -6.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.626e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.607303587501607e-5
allele num: 62216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.894e1

QD
type: SiteQuality
SIO_000300: 1.025e1

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.53e-1

ClippingRankSum
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SIO_000300: -1.069e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.86e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.612019215269046e-5
allele num: 62034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61906
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele count: 1
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allele num: 8624
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Other
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South Asian
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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MQ
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FS
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QD
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.5e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

Other
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South Asian
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Latino
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European (Non-Finnish)
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allele frequency: 1.620482903905364e-5
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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ClippingRankSum
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DP
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MQ
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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Latino
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African
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European (Non-Finnish)
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allele frequency: 5.028059817692282e-4
allele num: 61654
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Other
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BaseQRankSum
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FS
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QD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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East Asian
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European (Non-Finnish)
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African
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allele num: 8446
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European (Finnish)
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South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.1e-1

QD
type: SiteQuality
SIO_000300: 1.494e1

DP
type: SiteQuality
SIO_000300: 1.360487e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.908e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

GenotypeQuality
all individuals: 784
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.196744853997128e-4
allele num: 8356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.886e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 4.82e0

DP
type: SiteQuality
SIO_000300: 1.347862e6

FS
type: SiteQuality
SIO_000300: 5.006e0

VQSLOD
type: SiteQuality
SIO_000300: -4.216e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.623e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

GenotypeQuality
all individuals: 504
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2937
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61164
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.429543245869776e-4
allele num: 8232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15350
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 1.203e0

DP
type: SiteQuality
SIO_000300: 1.332308e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.61e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.507e0

QD
type: SiteQuality
SIO_000300: 1.179e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.639451767329005e-5
allele num: 60996
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.895e-1

DP
type: SiteQuality
SIO_000300: 1.329144e6

QD
type: SiteQuality
SIO_000300: 1.402e1

FS
type: SiteQuality
SIO_000300: 3.939e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.352e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e-1

GenotypeQuality
all individuals: 565
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.669334400426837e-5
allele num: 14994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60890
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.024096385542169e-4
allele num: 8300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.32762e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.269e0

QD
type: SiteQuality
SIO_000300: 1.314e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e-1

GenotypeQuality
all individuals: 593
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.72314105149926e-5
allele num: 14874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.327775e6

QD
type: SiteQuality
SIO_000300: 1.548e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

FS
type: SiteQuality
SIO_000300: 1.2673e1

VQSLOD
type: SiteQuality
SIO_000300: -1.439e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 658
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GenotypeQuality
all individuals: 695
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.231223836493475e-4
allele num: 8122
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.854258898530193e-5
allele num: 11294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14874
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2673e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.327775e6

MQRankSum
type: SiteQuality
SIO_000300: -5.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

VQSLOD
type: SiteQuality
SIO_000300: -1.439e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 1.548e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.701548409052238e-5
allele num: 58770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8948
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.242178447276941e-5
allele num: 13808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.245e0

VQSLOD
type: SiteQuality
SIO_000300: 5.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.067e0

DP
type: SiteQuality
SIO_000300: 1.445465e6

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.68e-1

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 3461
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GenotypeQuality
all individuals: 18496
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13798
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 6.105006105006105e-4
allele num: 8190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.061e1

DP
type: SiteQuality
SIO_000300: 1.450883e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

GenotypeQuality
all individuals: 3102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.69702652022502e-4
allele num: 7466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58754
num of homozygotes: 0

FS
type: SiteQuality
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QD
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ClippingRankSum
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SIO_000300: -2.71e-1

VQSLOD
type: SiteQuality
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DP
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SIO_000300: 1.453392e6

MQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.873e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.83e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58584
num of homozygotes: 0

East Asian
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allele frequency: 1.343363782912413e-4
allele num: 7444
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13756
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.223091976516634e-4
allele num: 8176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5824
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.459e0

QD
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DP
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ReadPosRankSum
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MQ
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InbreedingCoeff
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SIO_000300: -2.0e-3

ClippingRankSum
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SIO_000300: -1.74e-1

MQRankSum
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SIO_000300: 1.04e0

VQSLOD
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SIO_000300: -5.76e-2

BaseQRankSum
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SIO_000300: -1.349e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8176
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8930
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 8.525730655117144e-5
allele num: 58646
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5828
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.1e-3

MQRankSum
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ReadPosRankSum
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MQ
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FS
type: SiteQuality
SIO_000300: 9.16e-1

DP
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SIO_000300: 1.462125e6

VQSLOD
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SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.043e1

BaseQRankSum
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SIO_000300: 4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.119820828667413e-4
allele num: 8930
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.446183953033268e-4
allele num: 8176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13768
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58646
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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ReadPosRankSum
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SIO_000300: -7.000000000000001e-2

MQRankSum
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SIO_000300: 2.88e-1

ClippingRankSum
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SIO_000300: 2.39e-1

QD
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SIO_000300: 1.043e1

InbreedingCoeff
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SIO_000300: 3.1e-3

BaseQRankSum
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DP
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SIO_000300: 1.462125e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.731721677691961e-5
allele num: 57746
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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QD
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DP
type: SiteQuality
SIO_000300: 1.472265e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.468007629616785e-5
allele num: 57670
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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QD
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 2
allele frequency: 3.544842254519674e-4
allele num: 5642
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 57088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

MQ
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1075
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variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 2.280912364945978e-3
allele num: 8330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7148
num of homozygotes: 0

African
type: Population
allele count: 221
allele frequency: 2.798885511651469e-2
allele num: 7896
num of homozygotes: 6

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.067577666275221e-4
allele num: 56202
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

FS
type: SiteQuality
SIO_000300: 1.804e0

QD
type: SiteQuality
SIO_000300: 1.19e1

DP
type: SiteQuality
SIO_000300: 1.400443e6

MQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 768
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 397
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variant carriers: 0

GenotypeQuality
all individuals: 5529
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7052
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.803101334294987e-5
allele num: 55460
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.177e0

QD
type: SiteQuality
SIO_000300: 8.869999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.268e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

VQSLOD
type: SiteQuality
SIO_000300: -1.89e0

DP
type: SiteQuality
SIO_000300: 1.356163e6

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
all individuals: 747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 49

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 713
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variant carriers: 0

GenotypeQuality
all individuals: 1042
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variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 26
allele frequency: 1.972685887708649e-3
allele num: 13180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.796781775447478e-4
allele num: 55310
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.298701298701299e-4
allele num: 7700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.2306177701206e-4
allele num: 8126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7048
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.189e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.3e-1

FS
type: SiteQuality
SIO_000300: 1.143e0

DP
type: SiteQuality
SIO_000300: 1.354081e6

GenotypeQuality
all individuals: 4786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1965
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variant carriers: 0

GenotypeQuality
all individuals: 2701
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variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5547
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5243
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variant carriers: 0

GenotypeQuality
all individuals: 709
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variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
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variant carriers: 0

GenotypeQuality
all individuals: 7623
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1053
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14472
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.892659826361483e-5
allele num: 12670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5142
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

VQSLOD
type: SiteQuality
SIO_000300: -1.464e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

FS
type: SiteQuality
SIO_000300: 4.966e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.64e0

DP
type: SiteQuality
SIO_000300: 1.245711e6

GenotypeQuality
all individuals: 1965
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5518
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14472
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variant carriers: 0

GenotypeQuality
all individuals: 5547
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
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variant carriers: 0

GenotypeQuality
all individuals: 5243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2701
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variant carriers: 0

GenotypeQuality
all individuals: 1506
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variant carriers: 0

GenotypeQuality
all individuals: 4786
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variant carriers: 0

GenotypeQuality
all individuals: 290
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variant carriers: 0

GenotypeQuality
all individuals: 2390
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variant carriers: 1

GenotypeQuality
all individuals: 2133
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variant carriers: 0

GenotypeQuality
all individuals: 770
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1053
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variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 391
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12670
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.64e0

FS
type: SiteQuality
SIO_000300: 4.966e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.464e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.245711e6

GenotypeQuality
all individuals: 383
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1971
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 392
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1456
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.355905938868012e-4
allele num: 51626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7168
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.497005988023952e-3
allele num: 668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5096
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

QD
type: SiteQuality
SIO_000300: 1.181e1

FS
type: SiteQuality
SIO_000300: 4.218e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.239168e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 142
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 101
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7302
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.376344086021506e-3
allele num: 186
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.797e0

QD
type: SiteQuality
SIO_000300: 7.04e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 4.53429e5

GenotypeQuality
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bin: 1.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2646
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.53429e5

VQSLOD
type: SiteQuality
SIO_000300: 9.94e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 7.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 2.797e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

BaseQRankSum
type: SiteQuality
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GenotypeQuality
all individuals: 540
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variant carriers: 0

GenotypeQuality
all individuals: 5522
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
all individuals: 2926
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GenotypeQuality
all individuals: 284
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GenotypeQuality
all individuals: 4781
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.361285053090117e-4
allele num: 7346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.46e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.19e-1

FS
type: SiteQuality
SIO_000300: 2.363e0

DP
type: SiteQuality
SIO_000300: 4.58387e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.708e0

QD
type: SiteQuality
SIO_000300: 1.747e1

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 117
bin: 4.75e1
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GenotypeQuality
all individuals: 99
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2770
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.354279523293608e-4
allele num: 7384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.41e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.007e0

MQ
type: SiteQuality
SIO_000300: 5.702e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: -5.724e-1

QD
type: SiteQuality
SIO_000300: 1.643e1

FS
type: SiteQuality
SIO_000300: 3.436e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.6e-1

DP
type: SiteQuality
SIO_000300: 5.19586e5

GenotypeQuality
all individuals: 12386
bin: 2.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 141
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GenotypeQuality
all individuals: 815
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GenotypeQuality
all individuals: 200
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 4.06393931183961e-4
allele num: 7382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9040
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.17e-1

DP
type: SiteQuality
SIO_000300: 5.16799e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.54e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.49e-1

GenotypeQuality
all individuals: 366
bin: 3.25e1
variant carriers: 7

GenotypeQuality
all individuals: 263
bin: 7.25e1
variant carriers: 9

GenotypeQuality
all individuals: 12287
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 257
bin: 3.75e1
variant carriers: 10

GenotypeQuality
all individuals: 88
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variant carriers: 9

GenotypeQuality
all individuals: 2481
bin: 1.25e1
variant carriers: 8

GenotypeQuality
all individuals: 3461
bin: 2.5e0
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GenotypeQuality
all individuals: 179
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variant carriers: 5

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 25922
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GenotypeQuality
all individuals: 3436
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 7

GenotypeQuality
all individuals: 134
bin: 9.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1643
bin: 9.75e1
variant carriers: 196

GenotypeQuality
all individuals: 194
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 149
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 4695
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 383
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 248
bin: 7.75e1
variant carriers: 8

European (Non-Finnish)
type: Population
allele count: 213
allele frequency: 2.370881567230632e-2
allele num: 8984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7348
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.154639175257732e-3
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

African
type: Population
allele count: 100
allele frequency: 3.796507213363706e-2
allele num: 2634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.912e0

MQ
type: SiteQuality
SIO_000300: 5.564e1

DP
type: SiteQuality
SIO_000300: 5.56282e5

MQRankSum
type: SiteQuality
SIO_000300: -2.337e0

FS
type: SiteQuality
SIO_000300: 3.6135e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.519e0

VQSLOD
type: SiteQuality
SIO_000300: -1.295e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.28e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e0

QD
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
all individuals: 179
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3461
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
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variant carriers: 0

GenotypeQuality
all individuals: 128
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variant carriers: 0

GenotypeQuality
all individuals: 257
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variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 12287
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variant carriers: 0

GenotypeQuality
all individuals: 25922
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variant carriers: 0

GenotypeQuality
all individuals: 810
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variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4695
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
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variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.360914534567229e-4
allele num: 7348
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.564e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.912e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.28e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.337e0

FS
type: SiteQuality
SIO_000300: 3.6135e1

QD
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.519e0

VQSLOD
type: SiteQuality
SIO_000300: -1.295e1

DP
type: SiteQuality
SIO_000300: 5.56282e5

GenotypeQuality
all individuals: 218
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variant carriers: 0

GenotypeQuality
all individuals: 251
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1996
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.358695652173913e-4
allele num: 7360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.18e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.589e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.58e0

DP
type: SiteQuality
SIO_000300: 5.44244e5

GenotypeDepth
all individuals: 91
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
all individuals: 2424
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 1989
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 94
bin: 4.25e1
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GenotypeQuality
all individuals: 13473
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26091
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GenotypeQuality
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GenotypeQuality
all individuals: 265
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GenotypeQuality
all individuals: 4757
bin: 6.25e1
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GenotypeQuality
all individuals: 827
bin: 6.75e1
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GenotypeQuality
all individuals: 247
bin: 7.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.302083333333333e-3
allele num: 768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.433e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.242e0

DP
type: SiteQuality
SIO_000300: 5.44388e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.382e0

FS
type: SiteQuality
SIO_000300: 1.3178e1

MQ
type: SiteQuality
SIO_000300: 5.81e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.126e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

QD
type: SiteQuality
SIO_000300: 4.02e0

MQRankSum
type: SiteQuality
SIO_000300: -1.793e0

GenotypeDepth
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 1989
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variant carriers: 5

GenotypeQuality
all individuals: 26091
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GenotypeQuality
all individuals: 94
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13473
bin: 2.25e1
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GenotypeQuality
all individuals: 178
bin: 5.25e1
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GenotypeQuality
all individuals: 154
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GenotypeQuality
all individuals: 220
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 265
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GenotypeQuality
all individuals: 2410
bin: 2.5e0
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GenotypeQuality
all individuals: 2424
bin: 1.25e1
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GenotypeQuality
all individuals: 86
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GenotypeQuality
all individuals: 247
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GenotypeQuality
all individuals: 98
bin: 5.75e1
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GenotypeQuality
all individuals: 3232
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 7.567567567567568e-4
allele num: 9250
num of homozygotes: 0

European (Finnish)
type: Population
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African
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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Other
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InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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FS
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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Other
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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QD
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MQ
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FS
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DP
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 9656
num of homozygotes: 0

South Asian
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East Asian
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African
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Other
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Latino
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European (Finnish)
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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Other
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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VQSLOD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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QD
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FS
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Finnish)
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African
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East Asian
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Latino
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European (Non-Finnish)
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QD
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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Latino
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East Asian
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Other
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European (Finnish)
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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Latino
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South Asian
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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DP
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QD
type: SiteQuality
SIO_000300: 7.14e0

GenotypeDepth
all individuals: 75
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2239
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22617
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21919
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 162
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5172
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.24e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.433e0

DP
type: SiteQuality
SIO_000300: 5.91688e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.07e0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18970
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2929
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1862
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.172839506172839e-3
allele num: 162
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 5.881e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 5.44283e5

VQSLOD
type: SiteQuality
SIO_000300: 9.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

QD
type: SiteQuality
SIO_000300: 1.165e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.85e-2

FS
type: SiteQuality
SIO_000300: 4.54e-1

GenotypeQuality
all individuals: 2003
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2016
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29206
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 8.9126559714795e-4
allele num: 1122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.229e0

QD
type: SiteQuality
SIO_000300: 9.9e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 5.441e0

DP
type: SiteQuality
SIO_000300: 5.09877e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.54e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

GenotypeQuality
all individuals: 815
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29777
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2350
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.93057e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.570000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.76e-2

QD
type: SiteQuality
SIO_000300: 1.299e1

GenotypeQuality
all individuals: 8035
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3298
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4739
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28907
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.464e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.82e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 4.81529e5

GenotypeQuality
all individuals: 611
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6317
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24808
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6488
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3929
bin: 9.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 5.06129e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.226e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.29e0

QD
type: SiteQuality
SIO_000300: 1.63e1

GenotypeQuality
all individuals: 24808
bin: 7.5e0
variant carriers: 275

GenotypeQuality
all individuals: 4128
bin: 1.25e1
variant carriers: 193

GenotypeQuality
all individuals: 6317
bin: 2.25e1
variant carriers: 297

GenotypeQuality
all individuals: 169
bin: 5.25e1
variant carriers: 118

GenotypeQuality
all individuals: 3929
bin: 9.75e1
variant carriers: 2219

GenotypeQuality
all individuals: 831
bin: 2.75e1
variant carriers: 263

GenotypeQuality
all individuals: 1357
bin: 6.25e1
variant carriers: 236

GenotypeQuality
all individuals: 254
bin: 5.75e1
variant carriers: 222

GenotypeQuality
all individuals: 611
bin: 6.75e1
variant carriers: 188

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 198

GenotypeQuality
all individuals: 757
bin: 3.25e1
variant carriers: 199

GenotypeQuality
all individuals: 319
bin: 7.25e1
variant carriers: 143

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 39

GenotypeQuality
all individuals: 183
bin: 4.75e1
variant carriers: 71

GenotypeQuality
all individuals: 2572
bin: 1.75e1
variant carriers: 267

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 176

GenotypeQuality
all individuals: 212
bin: 8.25e1
variant carriers: 92

GenotypeQuality
all individuals: 311
bin: 3.75e1
variant carriers: 40

GenotypeQuality
all individuals: 257
bin: 7.75e1
variant carriers: 80

Latino
type: Population
allele count: 29
allele frequency: 6.561085972850679e-2
allele num: 442
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1266
allele frequency: 1.369536996971008e-1
allele num: 9244
num of homozygotes: 81

African
type: Population
allele count: 55
allele frequency: 1.886145404663923e-2
allele num: 2916
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 25
allele frequency: 1.736111111111111e-1
allele num: 144
num of homozygotes: 0

Other
type: Population
allele count: 21
allele frequency: 1.280487804878049e-1
allele num: 164
num of homozygotes: 2

South Asian
type: Population
allele count: 641
allele frequency: 1.375536480686695e-1
allele num: 4660
num of homozygotes: 43

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.29e0

DP
type: SiteQuality
SIO_000300: 5.06129e5

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.63e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.226e-1

GenotypeQuality
all individuals: 7514
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 4069
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1230
bin: 6.25e1
variant carriers: 6

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5010
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 209
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 699
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2839
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 462
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28907
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2242
bin: 9.75e1
variant carriers: 38

African
type: Population
allele count: 1
allele frequency: 3.434065934065934e-4
allele num: 2912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 3.518803606773697e-3
allele num: 9094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 966
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4550
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 4.96856e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.138e0

QD
type: SiteQuality
SIO_000300: 1.517e1

VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.75e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 7.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7092
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25565
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3722
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.526093088857546e-4
allele num: 2836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.777e-1

QD
type: SiteQuality
SIO_000300: 1.489e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.519999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.367e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

DP
type: SiteQuality
SIO_000300: 4.92601e5

GenotypeQuality
all individuals: 5976
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 2.5e0
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GenotypeQuality
all individuals: 1700
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 242
bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3771
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.941747572815534e-3
allele num: 1030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3260
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.38e-2

FS
type: SiteQuality
SIO_000300: 5.364e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.55e-1

QD
type: SiteQuality
SIO_000300: 1.238e1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-3

DP
type: SiteQuality
SIO_000300: 5.65468e5

BaseQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1762
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 4041
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21582
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1035
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16023
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4432
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 602
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 406
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 205
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3506
bin: 1.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 5.174452986398581e-4
allele num: 13528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.95159386068477e-4
allele num: 3388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

DP
type: SiteQuality
SIO_000300: 6.00063e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 2.445e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.64e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

QD
type: SiteQuality
SIO_000300: 1.246e1

GenotypeQuality
all individuals: 1762
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16023
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3506
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
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variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 3.25e1
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GenotypeQuality
all individuals: 205
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variant carriers: 0

GenotypeQuality
all individuals: 602
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variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4041
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21582
bin: 2.25e1
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GenotypeQuality
all individuals: 242
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variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.478415138971023e-4
allele num: 13528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1318
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.445e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.00063e5

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.64e-2

QD
type: SiteQuality
SIO_000300: 1.246e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

GenotypeQuality
all individuals: 3506
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 2.5e0
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GenotypeQuality
all individuals: 692
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 205
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GenotypeQuality
all individuals: 16023
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GenotypeQuality
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GenotypeQuality
all individuals: 562
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GenotypeQuality
all individuals: 21582
bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 208
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variant carriers: 0

GenotypeQuality
all individuals: 242
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GenotypeQuality
all individuals: 1299
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variant carriers: 1

GenotypeQuality
all individuals: 602
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variant carriers: 0

GenotypeQuality
all individuals: 1762
bin: 2.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.445945945945946e-4
allele num: 1184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1318
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.64e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.00063e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.445e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

QD
type: SiteQuality
SIO_000300: 1.246e1

GenotypeQuality
all individuals: 586
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1318
bin: 9.75e1
variant carriers: 27

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 100
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 243
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variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 2

East Asian
type: Population
allele count: 25
allele frequency: 1.441753171856978e-2
allele num: 1734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.252252252252252e-4
allele num: 8880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15562
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.60475e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.13e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

QD
type: SiteQuality
SIO_000300: 1.405e1

GenotypeQuality
all individuals: 592
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 748
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GenotypeQuality
all individuals: 246
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 19

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 1722
bin: 3.25e1
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GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2008
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 183
bin: 4.75e1
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GenotypeQuality
all individuals: 640
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6226
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 6.703229737964656e-4
allele num: 16410
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.704164413196323e-4
allele num: 3698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 1.110617503331852e-3
allele num: 9004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

DP
type: SiteQuality
SIO_000300: 6.8231e5

QD
type: SiteQuality
SIO_000300: 1.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

FS
type: SiteQuality
SIO_000300: 7.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

GenotypeDepth
all individuals: 409
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
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GenotypeQuality
all individuals: 1444
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variant carriers: 0

GenotypeQuality
all individuals: 1584
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GenotypeQuality
all individuals: 207
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GenotypeQuality
all individuals: 1293
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2006
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31291
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1852
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6551
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8603
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1980
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.814629608093964e-5
allele num: 17198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9052
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.93635e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.576e0

VQSLOD
type: SiteQuality
SIO_000300: -2.964e0

QD
type: SiteQuality
SIO_000300: 4.05e0

MQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.077e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.75e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33470
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5879
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 2.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.01667344448963e-4
allele num: 19672
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e0

VQSLOD
type: SiteQuality
SIO_000300: -3.537e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.27e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.39134e5

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

QD
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeDepth
all individuals: 39
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5329
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1732
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 369
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1927
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8830
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5513
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33587
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.91375037176564e-5
allele num: 20174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2564
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.805382027871216e-4
allele num: 4162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 7.47765e5

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.25e-2

FS
type: SiteQuality
SIO_000300: 2.722e0

QD
type: SiteQuality
SIO_000300: 1.277e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12153
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32881
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3445
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.092992796332679e-5
allele num: 24432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.376e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.442e1

DP
type: SiteQuality
SIO_000300: 8.13175e5

VQSLOD
type: SiteQuality
SIO_000300: -1.745e-1

GenotypeDepth
all individuals: 38
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 354
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31681
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.130880579010856e-4
allele num: 26528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.8405825624877e-5
allele num: 10162
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

FS
type: SiteQuality
SIO_000300: 5.661e0

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.27e0

DP
type: SiteQuality
SIO_000300: 8.45828e5

VQSLOD
type: SiteQuality
SIO_000300: 7.81e-1

GenotypeDepth
all individuals: 92
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31415
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 472
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1584
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14156
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2738
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.003205128205128e-4
allele num: 4992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4516
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.55927e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.900000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 2.177e0

MQRankSum
type: SiteQuality
SIO_000300: -4.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.65e-1