11-64574455-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574455
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574455
    reference: chr 11
allele count: 1
allele frequency: 8.440670526866655e-6
allele num: 118474
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.927+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.927+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.912+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.912+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.912+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.927+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.807+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.912+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.927+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.927+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.912+28G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-64574464-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574464
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574464
    reference: chr 11
allele count: 1
allele frequency: 8.407035006893769e-6
allele num: 118948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.912+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.927+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.927+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.912+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.912+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.927+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.927+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.912+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.927+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.807+19G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.912+19G>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

11-64574470-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574470
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574470
    reference: chr 11
allele count: 1
allele frequency: 8.38799510141086e-6
allele num: 119218
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.927+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.912+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.912+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.927+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.927+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.927+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.912+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.912+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.927+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.912+13A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.807+13A>G
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27777
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7134
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/11-64574477-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574477
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574477
    reference: chr 11
allele count: 1
allele frequency: 8.371423309391063e-6
allele num: 119454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.927+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.927+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.927+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.927+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.912+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.912+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.927+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.912+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.912+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.912+6G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.807+6G>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.927+6G>T
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-64574487-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574487
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574487
    reference: chr 11
allele count: 1
allele frequency: 8.350033400133601e-6
allele num: 119760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.908A>G
  hgvsp: ENSP00000308975.6:p.His303Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.908A>G
  hgvsp: ENSP00000366543.3:p.His303Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.908A>G
  hgvsp: ENSP00000323747.4:p.His303Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.923A>G
  hgvsp: ENSP00000377899.2:p.His308Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.908A>G
  hgvsp: ENSP00000413944.1:p.His303Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.908A>G
  hgvsp: ENSP00000366533.1:p.His303Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.923A>G
  hgvsp: ENSP00000337088.1:p.His308Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.923A>G
  hgvsp: ENSP00000366530.1:p.His308Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.923A>G
  hgvsp: ENSP00000377901.1:p.His308Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.803A>G
  hgvsp: ENSP00000366538.1:p.His268Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.923A>G
  hgvsp: ENSP00000396940.1:p.His308Arg
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His308Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

11-64574516-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574516
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574516
    reference: chr 11
allele count: 4
allele frequency: 3.327620917425087e-5
allele num: 120206
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.774T>C
  hgvsp: ENST00000377321.1:c.774T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.894T>C
  hgvsp: ENST00000394376.1:c.894T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.879T>C
  hgvsp: ENST00000315422.4:c.879T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.879T>C
  hgvsp: ENST00000377316.2:c.879T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.894T>C
  hgvsp: ENST00000394374.2:c.894T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.894T>C
  hgvsp: ENST00000377313.1:c.894T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.879T>C
  hgvsp: ENST00000440873.1:c.879T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.894T>C
  hgvsp: ENST00000337652.1:c.894T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.879T>C
  hgvsp: ENST00000312049.6:c.879T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.894T>C
  hgvsp: ENST00000443283.1:c.894T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.879T>C
  hgvsp: ENST00000377326.3:c.879T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro298Pro
num of homozygotes: 1
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

11-64574519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574519
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574519
    reference: chr 11
allele count: 1
allele frequency: 8.315870006320061e-6
allele num: 120252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.891C>T
  hgvsp: ENST00000443283.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.891C>T
  hgvsp: ENST00000377313.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.891C>T
  hgvsp: ENST00000394376.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.876C>T
  hgvsp: ENST00000312049.6:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.876C>T
  hgvsp: ENST00000377316.2:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.891C>T
  hgvsp: ENST00000394374.2:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.876C>T
  hgvsp: ENST00000377326.3:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.771C>T
  hgvsp: ENST00000377321.1:c.771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.891C>T
  hgvsp: ENST00000337652.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.876C>T
  hgvsp: ENST00000440873.1:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.876C>T
  hgvsp: ENST00000315422.4:c.876C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr297Thr
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

11-64574520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574520
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574520
    reference: chr 11
allele count: 1
allele frequency: 8.316008316008316e-6
allele num: 120250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.890C>T
  hgvsp: ENSP00000396940.1:p.Thr297Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.875C>T
  hgvsp: ENSP00000366533.1:p.Thr292Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.890C>T
  hgvsp: ENSP00000366530.1:p.Thr297Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.890C>T
  hgvsp: ENSP00000377899.2:p.Thr297Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.770C>T
  hgvsp: ENSP00000366538.1:p.Thr257Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.875C>T
  hgvsp: ENSP00000413944.1:p.Thr292Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.890C>T
  hgvsp: ENSP00000337088.1:p.Thr297Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.875C>T
  hgvsp: ENSP00000323747.4:p.Thr292Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.890C>T
  hgvsp: ENSP00000377901.1:p.Thr297Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.875C>T
  hgvsp: ENSP00000308975.6:p.Thr292Ile
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.875C>T
  hgvsp: ENSP00000366543.3:p.Thr292Ile
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr297Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

11-64574523-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574523
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574523
    reference: chr 11
allele count: 1
allele frequency: 8.314625426124552e-6
allele num: 120270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.887C>G
  hgvsp: ENSP00000377899.2:p.Pro296Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.872C>G
  hgvsp: ENSP00000308975.6:p.Pro291Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.887C>G
  hgvsp: ENSP00000396940.1:p.Pro296Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.872C>G
  hgvsp: ENSP00000366533.1:p.Pro291Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.887C>G
  hgvsp: ENSP00000366530.1:p.Pro296Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.872C>G
  hgvsp: ENSP00000413944.1:p.Pro291Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.872C>G
  hgvsp: ENSP00000323747.4:p.Pro291Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.872C>G
  hgvsp: ENSP00000366543.3:p.Pro291Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.887C>G
  hgvsp: ENSP00000337088.1:p.Pro296Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.887C>G
  hgvsp: ENSP00000377901.1:p.Pro296Arg
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.767C>G
  hgvsp: ENSP00000366538.1:p.Pro256Arg
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro296Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

11-64574531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574531
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574531
    reference: chr 11
allele count: 1
allele frequency: 8.313657676831499e-6
allele num: 120284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.864G>A
  hgvsp: ENST00000440873.1:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.864G>A
  hgvsp: ENST00000377326.3:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.879G>A
  hgvsp: ENST00000394376.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.879G>A
  hgvsp: ENST00000394374.2:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.864G>A
  hgvsp: ENST00000315422.4:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.864G>A
  hgvsp: ENST00000377316.2:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.759G>A
  hgvsp: ENST00000377321.1:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.879G>A
  hgvsp: ENST00000443283.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.879G>A
  hgvsp: ENST00000377313.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.879G>A
  hgvsp: ENST00000337652.1:c.879G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.864G>A
  hgvsp: ENST00000312049.6:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27230
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu293Glu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

11-64574539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574539
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574539
    reference: chr 11
allele count: 4
allele frequency: 3.32529719843711e-5
allele num: 120290
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.871C>T
  hgvsp: ENST00000337652.1:c.871C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.856C>T
  hgvsp: ENST00000377316.2:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.871C>T
  hgvsp: ENST00000394376.1:c.871C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.856C>T
  hgvsp: ENST00000440873.1:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.856C>T
  hgvsp: ENST00000377326.3:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.871C>T
  hgvsp: ENST00000394374.2:c.871C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.871C>T
  hgvsp: ENST00000443283.1:c.871C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.856C>T
  hgvsp: ENST00000312049.6:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.856C>T
  hgvsp: ENST00000315422.4:c.856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.871C>T
  hgvsp: ENST00000377313.1:c.871C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.751C>T
  hgvsp: ENST00000377321.1:c.751C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19704
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu291Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

11-64574548-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574548
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574548
    reference: chr 11
allele count: 1
allele frequency: 8.320298199487469e-6
allele num: 120188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.862C>T
  hgvsp: ENST00000394374.2:c.862C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.847C>T
  hgvsp: ENST00000315422.4:c.847C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.847C>T
  hgvsp: ENST00000440873.1:c.847C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.847C>T
  hgvsp: ENST00000377326.3:c.847C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.847C>T
  hgvsp: ENST00000312049.6:c.847C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.847C>T
  hgvsp: ENST00000377316.2:c.847C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.862C>T
  hgvsp: ENST00000337652.1:c.862C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.742C>T
  hgvsp: ENST00000377321.1:c.742C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.862C>T
  hgvsp: ENST00000377313.1:c.862C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.862C>T
  hgvsp: ENST00000394376.1:c.862C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.862C>T
  hgvsp: ENST00000443283.1:c.862C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu288Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum

11-64574552-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574552
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574552
    reference: chr 11
allele count: 4
allele frequency: 3.328617791462096e-5
allele num: 120170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.843G>C
  hgvsp: ENST00000377326.3:c.843G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.843G>C
  hgvsp: ENST00000312049.6:c.843G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.843G>C
  hgvsp: ENST00000440873.1:c.843G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.858G>C
  hgvsp: ENST00000337652.1:c.858G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.843G>C
  hgvsp: ENST00000450708.1:c.843G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.843G>C
  hgvsp: ENST00000315422.4:c.843G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.858G>C
  hgvsp: ENST00000394376.1:c.858G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.843G>C
  hgvsp: ENST00000377316.2:c.843G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.738G>C
  hgvsp: ENST00000377321.1:c.738G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.858G>C
  hgvsp: ENST00000394374.2:c.858G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.858G>C
  hgvsp: ENST00000377313.1:c.858G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.858G>C
  hgvsp: ENST00000443283.1:c.858G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly286Gly
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-64574556-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574556
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574556
    reference: chr 11
allele count: 1
allele frequency: 8.326533331112925e-6
allele num: 120098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.839T>C
  hgvsp: ENSP00000366533.1:p.Leu280Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.839T>C
  hgvsp: ENSP00000394933.1:p.Leu280Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.854T>C
  hgvsp: ENSP00000377899.2:p.Leu285Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.854T>C
  hgvsp: ENSP00000337088.1:p.Leu285Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.839T>C
  hgvsp: ENSP00000366543.3:p.Leu280Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.734T>C
  hgvsp: ENSP00000366538.1:p.Leu245Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.839T>C
  hgvsp: ENSP00000308975.6:p.Leu280Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.839T>C
  hgvsp: ENSP00000323747.4:p.Leu280Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.854T>C
  hgvsp: ENSP00000396940.1:p.Leu285Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.854T>C
  hgvsp: ENSP00000377901.1:p.Leu285Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.839T>C
  hgvsp: ENSP00000413944.1:p.Leu280Ser
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.854T>C
  hgvsp: ENSP00000366530.1:p.Leu285Ser
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu285Ser
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

11-64574558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574558
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574558
    reference: chr 11
allele count: 11
allele frequency: 9.164375572773474e-5
allele num: 120030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.732C>T
  hgvsp: ENST00000377321.1:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.837C>T
  hgvsp: ENST00000312049.6:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.852C>T
  hgvsp: ENST00000394374.2:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.837C>T
  hgvsp: ENST00000450708.1:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.852C>T
  hgvsp: ENST00000443283.1:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.852C>T
  hgvsp: ENST00000377313.1:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.837C>T
  hgvsp: ENST00000440873.1:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.852C>T
  hgvsp: ENST00000394376.1:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.852C>T
  hgvsp: ENST00000337652.1:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.837C>T
  hgvsp: ENST00000377316.2:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.837C>T
  hgvsp: ENST00000377326.3:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.837C>T
  hgvsp: ENST00000315422.4:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19684
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala284Ala
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

11-64574581-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574581
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574581
    reference: chr 11
allele count: 6
allele frequency: 5.03879875037791e-5
allele num: 119076
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.825-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.825-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.825-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.840-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.840-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.825-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.825-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.840-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.720-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.825-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.840-11T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.840-11T>C
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18806
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

11-64574584-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574584
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574584
    reference: chr 11
allele count: 1
allele frequency: 8.410570404884859e-6
allele num: 118898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.825-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.825-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.840-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.825-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.825-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.840-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.840-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.720-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.840-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.825-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.825-14T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.840-14T>C
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-64574594-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574594
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574594
    reference: chr 11
allele count: 11
allele frequency: 9.311617512613009e-5
allele num: 118132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.825-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.840-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.825-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.840-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.825-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.840-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.825-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.825-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.825-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.720-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.840-24G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.840-24G>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17115
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20901
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

11-64574596-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574596
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574596
    reference: chr 11
allele count: 1
allele frequency: 8.485218748939348e-6
allele num: 117852
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.825-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.840-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.825-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.840-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.840-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.825-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.825-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.840-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.840-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.720-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.825-26C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.825-26C>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-64574597-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574597
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574597
    reference: chr 11
allele count: 2
allele frequency: 1.699090986322318e-5
allele num: 117710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.825-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.825-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.840-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.825-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.825-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.825-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.840-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.840-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.825-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.840-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.840-27G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.720-27G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20498
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

11-64574604-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574604
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574605
    reference: chr 11
allele count: 2
allele frequency: 1.707912759816228e-5
allele num: 117102
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.825-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.825-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.840-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.825-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.825-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.840-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.840-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.840-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.825-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.720-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.840-35dupG
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.825-35dupG
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

11-64574609-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574609
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574609
    reference: chr 11
allele count: 1
allele frequency: 8.528057308545113e-6
allele num: 117260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.840-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.825-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.825-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.840-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.825-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.840-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.840-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.825-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.720-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.825-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.825-39G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.840-39G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-64574610-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574610
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574610
    reference: chr 11
allele count: 2
allele frequency: 1.70695070326369e-5
allele num: 117168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.825-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.840-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.825-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.720-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.825-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.840-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.825-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.825-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.840-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.840-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.840-40G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.825-40G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16044
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6116
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

11-64574611-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574611
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574611
    reference: chr 11
allele count: 1
allele frequency: 8.542189875796559e-6
allele num: 117066
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+40C>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

11-64574612-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574612
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574612
    reference: chr 11
allele count: 1
allele frequency: 8.538397172082857e-6
allele num: 117118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+39C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+39C>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15676
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

11-64574618-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574618
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574618
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 117022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+33G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+33G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

11-64574620-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574620
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574620
    reference: chr 11
allele count: 22
allele frequency: 1.880599056281201e-4
allele num: 116984
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+31T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+31T>C
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15701
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22081
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

11-64574623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574623
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574623
    reference: chr 11
allele count: 1
allele frequency: 8.559005785887911e-6
allele num: 116836
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+28G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+28G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

11-64574624-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574624
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574624
    reference: chr 11
allele count: 15
allele frequency: 1.285787759300531e-4
allele num: 116660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+27C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+27C>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22306
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15601
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/11-64574629-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574629
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574629
    reference: chr 11
allele count: 1
allele frequency: 8.560764305037153e-6
allele num: 116812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+22G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+22G>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23035
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

11-64574639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574639
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574639
    reference: chr 11
allele count: 4
allele frequency: 3.426652503169654e-5
allele num: 116732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+12G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+12G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23967
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

11-64574642-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574642
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574642
    reference: chr 11
allele count: 1
allele frequency: 8.571036752605596e-6
allele num: 116672
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.824+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.824+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.839+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.824+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.839+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.839+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.839+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.824+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.719+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.824+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.839+9A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.824+9A>G
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/11-64574656-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574656
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574656
    reference: chr 11
allele count: 1
allele frequency: 8.599931200550395e-6
allele num: 116280
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.834G>T
  hgvsp: ENST00000337652.1:c.834G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.714G>T
  hgvsp: ENST00000377321.1:c.714G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.834G>T
  hgvsp: ENST00000377313.1:c.834G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.834G>T
  hgvsp: ENST00000394374.2:c.834G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.834G>T
  hgvsp: ENST00000394376.1:c.834G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.819G>T
  hgvsp: ENST00000440873.1:c.819G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.819G>T
  hgvsp: ENST00000377316.2:c.819G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.834G>T
  hgvsp: ENST00000443283.1:c.834G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.819G>T
  hgvsp: ENST00000315422.4:c.819G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.819G>T
  hgvsp: ENST00000377326.3:c.819G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.819G>T
  hgvsp: ENST00000450708.1:c.819G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.819G>T
  hgvsp: ENST00000312049.6:c.819G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu278Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

11-64574667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574667
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574667
    reference: chr 11
allele count: 1
allele frequency: 8.633640115345432e-6
allele num: 115826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.808C>T
  hgvsp: ENST00000450708.1:c.808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.808C>T
  hgvsp: ENST00000312049.6:c.808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.808C>T
  hgvsp: ENST00000315422.4:c.808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.823C>T
  hgvsp: ENST00000394374.2:c.823C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.823C>T
  hgvsp: ENST00000377313.1:c.823C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.823C>T
  hgvsp: ENST00000443283.1:c.823C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.808C>T
  hgvsp: ENST00000377316.2:c.808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.823C>T
  hgvsp: ENST00000337652.1:c.823C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.808C>T
  hgvsp: ENST00000377326.3:c.808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.808C>T
  hgvsp: ENST00000440873.1:c.808C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.823C>T
  hgvsp: ENST00000394376.1:c.823C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.703C>T
  hgvsp: ENST00000377321.1:c.703C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu275Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

11-64574672-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574672
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574672
    reference: chr 11
allele count: 3
allele frequency: 2.599247950926199e-5
allele num: 115418
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.818A>G
  hgvsp: ENSP00000377901.1:p.Tyr273Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.803A>G
  hgvsp: ENSP00000394933.1:p.Tyr268Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.818A>G
  hgvsp: ENSP00000396940.1:p.Tyr273Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.803A>G
  hgvsp: ENSP00000413944.1:p.Tyr268Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.818A>G
  hgvsp: ENSP00000337088.1:p.Tyr273Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.803A>G
  hgvsp: ENSP00000308975.6:p.Tyr268Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.803A>G
  hgvsp: ENSP00000366543.3:p.Tyr268Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.818A>G
  hgvsp: ENSP00000377899.2:p.Tyr273Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.698A>G
  hgvsp: ENSP00000366538.1:p.Tyr233Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.818A>G
  hgvsp: ENSP00000366530.1:p.Tyr273Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.803A>G
  hgvsp: ENSP00000323747.4:p.Tyr268Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.803A>G
  hgvsp: ENSP00000366533.1:p.Tyr268Cys
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24310
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr273Cys
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

11-64574674-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574674
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574674
    reference: chr 11
allele count: 1
allele frequency: 8.719764217575556e-6
allele num: 114682
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.816C>G
  hgvsp: ENST00000377313.1:c.816C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.801C>G
  hgvsp: ENST00000440873.1:c.801C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.801C>G
  hgvsp: ENST00000450708.1:c.801C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.816C>G
  hgvsp: ENST00000337652.1:c.816C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.801C>G
  hgvsp: ENST00000377316.2:c.801C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.816C>G
  hgvsp: ENST00000394374.2:c.816C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.801C>G
  hgvsp: ENST00000315422.4:c.801C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.801C>G
  hgvsp: ENST00000312049.6:c.801C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.816C>G
  hgvsp: ENST00000394376.1:c.816C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.801C>G
  hgvsp: ENST00000377326.3:c.801C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.696C>G
  hgvsp: ENST00000377321.1:c.696C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.816C>G
  hgvsp: ENST00000443283.1:c.816C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu272Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-64574699-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574699
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574699
    reference: chr 11
allele count: 1
allele frequency: 8.91392711973187e-6
allele num: 112184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-8G>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-8G>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20129
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.799-8G>T
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

11-64574701-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574701
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574701
    reference: chr 11
allele count: 9
allele frequency: 8.056575060424313e-5
allele num: 111710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-10C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-10C>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13681
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-64574704-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574704
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574702
    reference: chr 11
allele count: 19
allele frequency: 1.701929450545513e-4
allele num: 111638
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-15_799-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-15_679-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-15_784-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-15_784-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-15_799-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-15_784-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-15_784-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-15_799-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-15_784-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-15_799-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-15_784-14delTC
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-15_799-14delTC
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10716
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18842
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13359
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: GGA
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

11-64574720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574720
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574720
    reference: chr 11
allele count: 1
allele frequency: 9.138595946118838e-6
allele num: 109426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-29G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-29G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

11-64574722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574722
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574722
    reference: chr 11
allele count: 3
allele frequency: 2.753910552985239e-5
allele num: 108936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-31G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-31G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9241
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-64574723-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574723
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574723
    reference: chr 11
allele count: 7
allele frequency: 6.481841583791692e-5
allele num: 107994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-32C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-32C>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18365
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8026
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

11-64574731-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574731
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574731
    reference: chr 11
allele count: 1
allele frequency: 9.440552838774238e-6
allele num: 105926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-40C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-40C>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14140
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

11-64574739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574739
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574739
    reference: chr 11
allele count: 4
allele frequency: 3.915503435854265e-5
allele num: 102158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-48G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-48G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14043
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17076
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8097
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

11-64574740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574740
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574740
    reference: chr 11
allele count: 6
allele frequency: 5.908303135339531e-5
allele num: 101552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.784-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.784-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.799-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.784-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.799-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.799-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.799-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.799-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.784-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.784-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.679-49C>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.784-49C>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13954
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7854
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17006
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

11-64574977-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574977
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574977
    reference: chr 11
allele count: 1
allele frequency: 8.552271483305966e-6
allele num: 116928
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.783+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.798+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.783+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.783+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.678+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.798+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.798+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.798+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.798+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.783+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.783+47C>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.783+47C>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

11-64574983-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574983
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574983
    reference: chr 11
allele count: 2
allele frequency: 1.707096399733693e-5
allele num: 117158
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.783+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.798+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.783+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.798+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.798+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.678+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.783+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.798+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.783+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.783+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.798+41A>T
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.783+41A>T
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11149
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17578
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-64574983-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574983
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574983
    reference: chr 11
allele count: 1
allele frequency: 8.535481998668465e-6
allele num: 117158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.798+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.798+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.783+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.798+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.783+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.783+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.783+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.798+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.783+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.798+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.783+41A>G
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.678+41A>G
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

11-64574989-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574989
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574989
    reference: chr 11
allele count: 1
allele frequency: 8.511072905850511e-6
allele num: 117494
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.678+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.798+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.783+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.783+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.783+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.798+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.798+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.783+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.798+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.798+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.783+35G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.783+35G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19879
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

11-64574991-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574991
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574991
    reference: chr 11
allele count: 1
allele frequency: 8.498342823149486e-6
allele num: 117670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.798+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.798+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.783+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.678+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.783+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.798+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.783+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.783+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.798+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.798+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.783+33T>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.783+33T>C
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12241
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

11-64574994-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574994
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574994
    reference: chr 11
allele count: 1
allele frequency: 8.47802495930548e-6
allele num: 117952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.798+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.783+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.798+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.678+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.783+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.783+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.798+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.783+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.798+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.783+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.798+30G>A
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.783+30G>A
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-64574995-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64574995
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64574995
    reference: chr 11
allele count: 1
allele frequency: 8.469695429752346e-6
allele num: 118068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.783+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.783+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.783+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.678+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.783+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.798+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.783+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.798+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.798+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.798+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.798+29G>C
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.783+29G>C
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-64575033-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575033
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575033
    reference: chr 11
allele count: 2
allele frequency: 1.655738790648387e-5
allele num: 120792
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.774G>C
  hgvsp: ENSP00000366533.1:p.Gln258His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.789G>C
  hgvsp: ENSP00000366530.1:p.Gln263His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.789G>C
  hgvsp: ENSP00000377899.2:p.Gln263His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.789G>C
  hgvsp: ENSP00000337088.1:p.Gln263His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.774G>C
  hgvsp: ENSP00000394933.1:p.Gln258His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.774G>C
  hgvsp: ENSP00000366543.3:p.Gln258His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.669G>C
  hgvsp: ENSP00000366538.1:p.Gln223His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.774G>C
  hgvsp: ENSP00000411218.1:p.Gln258His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.789G>C
  hgvsp: ENSP00000396940.1:p.Gln263His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.774G>C
  hgvsp: ENSP00000413944.1:p.Gln258His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.789G>C
  hgvsp: ENSP00000377901.1:p.Gln263His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.774G>C
  hgvsp: ENSP00000323747.4:p.Gln258His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.774G>C
  hgvsp: ENSP00000308975.6:p.Gln258His
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln263His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-64575039-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575039
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575039
    reference: chr 11
allele count: 1
allele frequency: 8.270477702792114e-6
allele num: 120912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.783T>G
  hgvsp: ENST00000443283.1:c.783T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.768T>G
  hgvsp: ENST00000440873.1:c.768T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.768T>G
  hgvsp: ENST00000312049.6:c.768T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.783T>G
  hgvsp: ENST00000377313.1:c.783T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.783T>G
  hgvsp: ENST00000337652.1:c.783T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.768T>G
  hgvsp: ENST00000377326.3:c.768T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.663T>G
  hgvsp: ENST00000377321.1:c.663T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.768T>G
  hgvsp: ENST00000377316.2:c.768T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.768T>G
  hgvsp: ENST00000315422.4:c.768T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.783T>G
  hgvsp: ENST00000394374.2:c.783T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.783T>G
  hgvsp: ENST00000394376.1:c.783T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.768T>G
  hgvsp: ENST00000450708.1:c.768T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.768T>G
  hgvsp: ENST00000413626.1:c.768T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu261Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS

11-64575045-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575045
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575045
    reference: chr 11
allele count: 25
allele frequency: 2.066457265663746e-4
allele num: 120980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.777G>A
  hgvsp: ENST00000394376.1:c.777G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.762G>A
  hgvsp: ENST00000377316.2:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.762G>A
  hgvsp: ENST00000413626.1:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.777G>A
  hgvsp: ENST00000443283.1:c.777G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.777G>A
  hgvsp: ENST00000337652.1:c.777G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.762G>A
  hgvsp: ENST00000377326.3:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.777G>A
  hgvsp: ENST00000394374.2:c.777G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.762G>A
  hgvsp: ENST00000315422.4:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.762G>A
  hgvsp: ENST00000312049.6:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.657G>A
  hgvsp: ENST00000377321.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.762G>A
  hgvsp: ENST00000440873.1:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.777G>A
  hgvsp: ENST00000377313.1:c.777G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.762G>A
  hgvsp: ENST00000450708.1:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8789
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
hgvs: p.Leu259Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-64575048-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575048
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575048
    reference: chr 11
allele count: 1
allele frequency: 8.265145879824779e-6
allele num: 120990
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.774G>T
  hgvsp: ENST00000394376.1:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.774G>T
  hgvsp: ENST00000337652.1:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.774G>T
  hgvsp: ENST00000443283.1:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.759G>T
  hgvsp: ENST00000377326.3:c.759G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.774G>T
  hgvsp: ENST00000394374.2:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.759G>T
  hgvsp: ENST00000312049.6:c.759G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.759G>T
  hgvsp: ENST00000450708.1:c.759G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.759G>T
  hgvsp: ENST00000377316.2:c.759G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.654G>T
  hgvsp: ENST00000377321.1:c.654G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.759G>T
  hgvsp: ENST00000440873.1:c.759G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.759G>T
  hgvsp: ENST00000413626.1:c.759G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.774G>T
  hgvsp: ENST00000377313.1:c.774G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.759G>T
  hgvsp: ENST00000315422.4:c.759G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser258Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-64575048-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575048
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575048
    reference: chr 11
allele count: 19
allele frequency: 1.570377717166708e-4
allele num: 120990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.774G>A
  hgvsp: ENST00000443283.1:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.759G>A
  hgvsp: ENST00000413626.1:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.774G>A
  hgvsp: ENST00000337652.1:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.759G>A
  hgvsp: ENST00000315422.4:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.759G>A
  hgvsp: ENST00000440873.1:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.774G>A
  hgvsp: ENST00000394376.1:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.774G>A
  hgvsp: ENST00000394374.2:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.759G>A
  hgvsp: ENST00000377316.2:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.759G>A
  hgvsp: ENST00000450708.1:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.759G>A
  hgvsp: ENST00000312049.6:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.654G>A
  hgvsp: ENST00000377321.1:c.654G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.759G>A
  hgvsp: ENST00000377326.3:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.774G>A
  hgvsp: ENST00000377313.1:c.774G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ser258Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-64575053-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575053
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575053
    reference: chr 11
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.769G>T
  hgvsp: ENSP00000396940.1:p.Asp257Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.754G>T
  hgvsp: ENSP00000323747.4:p.Asp252Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.754G>T
  hgvsp: ENSP00000308975.6:p.Asp252Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.769G>T
  hgvsp: ENSP00000377899.2:p.Asp257Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.754G>T
  hgvsp: ENSP00000394933.1:p.Asp252Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.754G>T
  hgvsp: ENSP00000411218.1:p.Asp252Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.649G>T
  hgvsp: ENSP00000366538.1:p.Asp217Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.754G>T
  hgvsp: ENSP00000413944.1:p.Asp252Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.769G>T
  hgvsp: ENSP00000337088.1:p.Asp257Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.754G>T
  hgvsp: ENSP00000366543.3:p.Asp252Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.754G>T
  hgvsp: ENSP00000366533.1:p.Asp252Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.769G>T
  hgvsp: ENSP00000366530.1:p.Asp257Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.769G>T
  hgvsp: ENSP00000377901.1:p.Asp257Tyr
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp257Tyr
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-64575053-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575053
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575053
    reference: chr 11
allele count: 2
allele frequency: 1.652291728627607e-5
allele num: 121044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.769G>C
  hgvsp: ENSP00000396940.1:p.Asp257His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.754G>C
  hgvsp: ENSP00000366543.3:p.Asp252His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.754G>C
  hgvsp: ENSP00000323747.4:p.Asp252His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.649G>C
  hgvsp: ENSP00000366538.1:p.Asp217His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.769G>C
  hgvsp: ENSP00000337088.1:p.Asp257His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.769G>C
  hgvsp: ENSP00000377901.1:p.Asp257His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.769G>C
  hgvsp: ENSP00000377899.2:p.Asp257His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.754G>C
  hgvsp: ENSP00000394933.1:p.Asp252His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.754G>C
  hgvsp: ENSP00000413944.1:p.Asp252His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.769G>C
  hgvsp: ENSP00000366530.1:p.Asp257His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.754G>C
  hgvsp: ENSP00000366533.1:p.Asp252His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.754G>C
  hgvsp: ENSP00000308975.6:p.Asp252His
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.754G>C
  hgvsp: ENSP00000411218.1:p.Asp252His
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp257His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

11-64575054-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575054
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575054
    reference: chr 11
allele count: 3
allele frequency: 2.47827379968939e-5
allele num: 121052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.753C>T
  hgvsp: ENST00000312049.6:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.753C>T
  hgvsp: ENST00000450708.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.753C>T
  hgvsp: ENST00000377326.3:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.768C>T
  hgvsp: ENST00000394376.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.753C>T
  hgvsp: ENST00000413626.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.768C>T
  hgvsp: ENST00000337652.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.768C>T
  hgvsp: ENST00000377313.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.753C>T
  hgvsp: ENST00000377316.2:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.768C>T
  hgvsp: ENST00000394374.2:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.648C>T
  hgvsp: ENST00000377321.1:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.753C>T
  hgvsp: ENST00000440873.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.753C>T
  hgvsp: ENST00000315422.4:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.768C>T
  hgvsp: ENST00000443283.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr256Thr
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-64575065-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575065
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575065
    reference: chr 11
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.742G>T
  hgvsp: ENSP00000413944.1:p.Asp248Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.742G>T
  hgvsp: ENSP00000366543.3:p.Asp248Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.742G>T
  hgvsp: ENSP00000411218.1:p.Asp248Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.637G>T
  hgvsp: ENSP00000366538.1:p.Asp213Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.757G>T
  hgvsp: ENSP00000377899.2:p.Asp253Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.742G>T
  hgvsp: ENSP00000366533.1:p.Asp248Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.757G>T
  hgvsp: ENSP00000366530.1:p.Asp253Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.757G>T
  hgvsp: ENSP00000396940.1:p.Asp253Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.742G>T
  hgvsp: ENSP00000394933.1:p.Asp248Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.757G>T
  hgvsp: ENSP00000377901.1:p.Asp253Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.742G>T
  hgvsp: ENSP00000323747.4:p.Asp248Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.757G>T
  hgvsp: ENSP00000337088.1:p.Asp253Tyr
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.742G>T
  hgvsp: ENSP00000308975.6:p.Asp248Tyr
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp253Tyr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-64575096-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575096
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575096
    reference: chr 11
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.711G>A
  hgvsp: ENST00000440873.1:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.726G>A
  hgvsp: ENST00000377313.1:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.711G>A
  hgvsp: ENST00000377326.3:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.711G>A
  hgvsp: ENST00000377316.2:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.726G>A
  hgvsp: ENST00000394374.2:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.726G>A
  hgvsp: ENST00000337652.1:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.606G>A
  hgvsp: ENST00000377321.1:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.711G>A
  hgvsp: ENST00000315422.4:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.726G>A
  hgvsp: ENST00000394376.1:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.711G>A
  hgvsp: ENST00000312049.6:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.711G>A
  hgvsp: ENST00000413626.1:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.726G>A
  hgvsp: ENST00000443283.1:c.726G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.711G>A
  hgvsp: ENST00000450708.1:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala242Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

11-64575097-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575097
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575097
    reference: chr 11
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.725C>T
  hgvsp: ENSP00000396940.1:p.Ala242Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.725C>T
  hgvsp: ENSP00000337088.1:p.Ala242Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.710C>T
  hgvsp: ENSP00000413944.1:p.Ala237Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.725C>T
  hgvsp: ENSP00000377901.1:p.Ala242Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.710C>T
  hgvsp: ENSP00000394933.1:p.Ala237Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.605C>T
  hgvsp: ENSP00000366538.1:p.Ala202Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.725C>T
  hgvsp: ENSP00000366530.1:p.Ala242Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.710C>T
  hgvsp: ENSP00000411218.1:p.Ala237Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.710C>T
  hgvsp: ENSP00000308975.6:p.Ala237Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.710C>T
  hgvsp: ENSP00000366543.3:p.Ala237Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.710C>T
  hgvsp: ENSP00000323747.4:p.Ala237Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.725C>T
  hgvsp: ENSP00000377899.2:p.Ala242Val
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.710C>T
  hgvsp: ENSP00000366533.1:p.Ala237Val
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala242Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-64575102-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575102
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575102
    reference: chr 11
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.705G>A
  hgvsp: ENST00000312049.6:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.705G>A
  hgvsp: ENST00000315422.4:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.720G>A
  hgvsp: ENST00000394374.2:c.720G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.720G>A
  hgvsp: ENST00000394376.1:c.720G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.720G>A
  hgvsp: ENST00000337652.1:c.720G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.705G>A
  hgvsp: ENST00000440873.1:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.705G>A
  hgvsp: ENST00000450708.1:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.705G>A
  hgvsp: ENST00000377316.2:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.705G>A
  hgvsp: ENST00000377326.3:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.705G>A
  hgvsp: ENST00000413626.1:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.720G>A
  hgvsp: ENST00000443283.1:c.720G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.720G>A
  hgvsp: ENST00000377313.1:c.720G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.600G>A
  hgvsp: ENST00000377321.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu240Glu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

11-64575111-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575111
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575111
    reference: chr 11
allele count: 2
allele frequency: 1.651855033202286e-5
allele num: 121076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.711C>T
  hgvsp: ENST00000443283.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.696C>T
  hgvsp: ENST00000413626.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.696C>T
  hgvsp: ENST00000312049.6:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.696C>T
  hgvsp: ENST00000450708.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.711C>T
  hgvsp: ENST00000394374.2:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.696C>T
  hgvsp: ENST00000440873.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.711C>T
  hgvsp: ENST00000377313.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.696C>T
  hgvsp: ENST00000377316.2:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.696C>T
  hgvsp: ENST00000377326.3:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.711C>T
  hgvsp: ENST00000337652.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.711C>T
  hgvsp: ENST00000394376.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.591C>T
  hgvsp: ENST00000377321.1:c.591C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.696C>T
  hgvsp: ENST00000315422.4:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg237Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

11-64575122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575122
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575122
    reference: chr 11
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.685C>T
  hgvsp: ENSP00000366543.3:p.Arg229Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.685C>T
  hgvsp: ENSP00000308975.6:p.Arg229Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.685C>T
  hgvsp: ENSP00000366533.1:p.Arg229Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.685C>T
  hgvsp: ENSP00000411218.1:p.Arg229Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.700C>T
  hgvsp: ENSP00000377901.1:p.Arg234Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.700C>T
  hgvsp: ENSP00000377899.2:p.Arg234Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.700C>T
  hgvsp: ENSP00000366530.1:p.Arg234Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.685C>T
  hgvsp: ENSP00000323747.4:p.Arg229Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.685C>T
  hgvsp: ENSP00000413944.1:p.Arg229Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.685C>T
  hgvsp: ENSP00000394933.1:p.Arg229Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.700C>T
  hgvsp: ENSP00000337088.1:p.Arg234Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.580C>T
  hgvsp: ENSP00000366538.1:p.Arg194Cys
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.700C>T
  hgvsp: ENSP00000396940.1:p.Arg234Cys
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg234Cys
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

11-64575126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64575126
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64575126
    reference: chr 11
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366530
  ensembl transcript: ENST00000377313
  gene symbol: MEN1
  hgvsc: ENST00000377313.1:c.696C>T
  hgvsp: ENST00000377313.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377899
  ensembl transcript: ENST00000394374
  gene symbol: MEN1
  hgvsc: ENST00000394374.2:c.696C>T
  hgvsp: ENST00000394374.2:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000413944
  ensembl transcript: ENST00000440873
  gene symbol: MEN1
  hgvsc: ENST00000440873.1:c.681C>T
  hgvsp: ENST00000440873.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000323747
  ensembl transcript: ENST00000315422
  gene symbol: MEN1
  hgvsc: ENST00000315422.4:c.681C>T
  hgvsp: ENST00000315422.4:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000411218
  ensembl transcript: ENST00000413626
  gene symbol: MEN1
  hgvsc: ENST00000413626.1:c.681C>T
  hgvsp: ENST00000413626.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000377901
  ensembl transcript: ENST00000394376
  gene symbol: MEN1
  hgvsc: ENST00000394376.1:c.696C>T
  hgvsp: ENST00000394376.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000308975
  ensembl transcript: ENST00000312049
  gene symbol: MEN1
  hgvsc: ENST00000312049.6:c.681C>T
  hgvsp: ENST00000312049.6:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000337088
  ensembl transcript: ENST00000337652
  gene symbol: MEN1
  hgvsc: ENST00000337652.1:c.696C>T
  hgvsp: ENST00000337652.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000396940
  ensembl transcript: ENST00000443283
  gene symbol: MEN1
  hgvsc: ENST00000443283.1:c.696C>T
  hgvsp: ENST00000443283.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366543
  ensembl transcript: ENST00000377326
  gene symbol: MEN1
  hgvsc: ENST00000377326.3:c.681C>T
  hgvsp: ENST00000377326.3:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366533
  ensembl transcript: ENST00000377316
  gene symbol: MEN1
  hgvsc: ENST00000377316.2:c.681C>T
  hgvsp: ENST00000377316.2:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000366538
  ensembl transcript: ENST00000377321
  gene symbol: MEN1
  hgvsc: ENST00000377321.1:c.576C>T
  hgvsp: ENST00000377321.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000133895
  ensembl protein: ENSP00000394933
  ensembl transcript: ENST00000450708
  gene symbol: MEN1
  hgvsc: ENST00000450708.1:c.681C>T
  hgvsp: ENST00000450708.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr232Tyr
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 5784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36979
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1268
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7129
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 256
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.16294835449279e-5
allele num: 16226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5806
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.690496e6

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.696e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.358e0

QD
type: SiteQuality
SIO_000300: 3.024e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.079e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7133
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 482
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5850
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.140997297961189e-5
allele num: 16284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65700
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.125e0

DP
type: SiteQuality
SIO_000300: 1.715611e6

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 3.633e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.18e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
all individuals: 1310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40031
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6075
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1529
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519018106695832e-5
allele num: 65832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5874
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 8.9e0

BaseQRankSum
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SIO_000300: 3.35e0

DP
type: SiteQuality
SIO_000300: 1.724571e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

FS
type: SiteQuality
SIO_000300: 1.64e0

VQSLOD
type: SiteQuality
SIO_000300: -1.714e-1

GenotypeDepth
all individuals: 18376
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65948
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

FS
type: SiteQuality
SIO_000300: 6.175e0

InbreedingCoeff
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SIO_000300: -8.0e-4

VQSLOD
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SIO_000300: -5.339e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.732658e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.342e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.442e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5966
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.701202949165696e-5
allele num: 10308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.247e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 8.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 1.739179e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.236e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7133
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 374
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.429543245869776e-4
allele num: 16464
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.57e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.452e-1

DP
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SIO_000300: 1.750671e6

MQRankSum
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SIO_000300: -6.66e-1

QD
type: SiteQuality
SIO_000300: 1.843e1

FS
type: SiteQuality
SIO_000300: 5.824e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.96e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 643
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66280
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ReadPosRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
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SIO_000300: -3.38e-1

DP
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SIO_000300: 1.751729e6

VQSLOD
type: SiteQuality
SIO_000300: -3.221e0

FS
type: SiteQuality
SIO_000300: 3.581e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.44e-1

QD
type: SiteQuality
SIO_000300: 1.46e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.50879628232596e-5
allele num: 66278
num of homozygotes: 0

East Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.11e-1

MQ
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FS
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66284
num of homozygotes: 0

Latino
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num of homozygotes: 0

African
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Other
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East Asian
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European (Finnish)
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VQSLOD
type: SiteQuality
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 372
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
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allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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QD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 4.636068613815484e-4
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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FS
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ClippingRankSum
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DP
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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QD
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DP
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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VQSLOD
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MQ
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FS
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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Latino
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African
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East Asian
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South Asian
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European (Finnish)
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MQ
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QD
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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South Asian
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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African
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South Asian
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allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.716e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.735e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

FS
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SIO_000300: 2.678e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.117e1

DP
type: SiteQuality
SIO_000300: 1.693267e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.649e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 30448
bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16162
num of homozygotes: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 1.689863889144929e-4
allele num: 65094
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

FS
type: SiteQuality
SIO_000300: 7.236e0

MQRankSum
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BaseQRankSum
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SIO_000300: -2.955e0

QD
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SIO_000300: 1.326e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.663679e6

VQSLOD
type: SiteQuality
SIO_000300: 6.29e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.892050506846879e-5
allele num: 11246
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64952
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.643e0

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

InbreedingCoeff
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SIO_000300: -8.0e-4

ReadPosRankSum
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SIO_000300: 4.15e-1

BaseQRankSum
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SIO_000300: -4.052e0

MQRankSum
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SIO_000300: -3.76e-1

DP
type: SiteQuality
SIO_000300: 1.656027e6

QD
type: SiteQuality
SIO_000300: 1.282e1

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27968
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.259452411994785e-4
allele num: 6136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 7.422e0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

BaseQRankSum
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SIO_000300: -2.437e0

QD
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SIO_000300: 1.416e1

DP
type: SiteQuality
SIO_000300: 1.653226e6

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7117
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64546
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.214267959234402e-5
allele num: 16092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8368
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.636661211129296e-4
allele num: 6110
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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FS
type: SiteQuality
SIO_000300: 5.708e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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SIO_000300: 1.644353e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1308
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6128
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.216585851050602e-5
allele num: 16086
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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DP
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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MQ
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FS
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.003613006824568e-4
allele num: 9964
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54832316601121e-5
allele num: 64586
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11178
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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Other
type: Population
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FS
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InbreedingCoeff
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MQ
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QD
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.549714852467146e-5
allele num: 64528
num of homozygotes: 0

MQ
type: SiteQuality
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QD
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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FS
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 1.636961e6

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

GenotypeDepth
all individuals: 891
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4353
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.004621257785815e-4
allele num: 9954
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.505e0

MQRankSum
type: SiteQuality
SIO_000300: -7.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.779e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.636465e6

QD
type: SiteQuality
SIO_000300: 1.238e1

GenotypeDepth
all individuals: 315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4560
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 253
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variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16042
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6144
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.637911e6

QD
type: SiteQuality
SIO_000300: 1.325e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeDepth
all individuals: 928
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variant carriers: 0

GenotypeQuality
all individuals: 4565
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variant carriers: 0

GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 127
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GenotypeQuality
all individuals: 4400
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
all individuals: 531
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GenotypeQuality
all individuals: 1021
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16040
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.256217825466724e-4
allele num: 64492
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.007658202337767e-4
allele num: 9924
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.76e-1

FS
type: SiteQuality
SIO_000300: 5.876e0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

DP
type: SiteQuality
SIO_000300: 1.640116e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.231e1

GenotypeDepth
all individuals: 315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 789
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GenotypeQuality
all individuals: 4419
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6144
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.242976651267325e-5
allele num: 16018
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

FS
type: SiteQuality
SIO_000300: 3.954e0

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

BaseQRankSum
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SIO_000300: -1.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-2

QD
type: SiteQuality
SIO_000300: 8.359999999999999e0

DP
type: SiteQuality
SIO_000300: 1.637775e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 121
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.255473539346929e-5
allele num: 15986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.328648278864393e-5
allele num: 64318
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.597769382982551e-4
allele num: 11118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.027856277755349e-4
allele num: 9908
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.199040767386091e-4
allele num: 8340
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

BaseQRankSum
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QD
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.243e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

InbreedingCoeff
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SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.640306e6

MQ
type: SiteQuality
SIO_000300: 5.987e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 797
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64416
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.010305112143867e-4
allele num: 9898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.16e0

FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-3

DP
type: SiteQuality
SIO_000300: 1.642317e6

BaseQRankSum
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SIO_000300: -3.736e0

MQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 603
bin: 4.25e1
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GenotypeQuality
all individuals: 393
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6162
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.503755633450175e-4
allele num: 15976
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

QD
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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VQSLOD
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BaseQRankSum
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QD
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FS
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ClippingRankSum
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MQ
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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African
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Other
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European (Finnish)
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DP
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64010
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African
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East Asian
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Latino
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Other
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European (Finnish)
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South Asian
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ReadPosRankSum
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VQSLOD
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DP
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MQ
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ClippingRankSum
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 9700
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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Latino
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South Asian
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FS
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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African
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Other
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InbreedingCoeff
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MQ
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FS
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QD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Other
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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MQRankSum
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BaseQRankSum
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DP
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FS
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ClippingRankSum
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MQ
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 18

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 468
bin: 8.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.586151160535333e-4
allele num: 61868
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.075731497418244e-4
allele num: 9296
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.299714062906161e-4
allele num: 15388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.448e1

ReadPosRankSum
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SIO_000300: 0.0e0

MQ
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SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 1.203e0

BaseQRankSum
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SIO_000300: 1.12e-1

InbreedingCoeff
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SIO_000300: 5.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

DP
type: SiteQuality
SIO_000300: 1.529965e6

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.647175094712568e-5
allele num: 60710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

DP
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SIO_000300: 1.402466e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.814e0

BaseQRankSum
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SIO_000300: -7.93e-1

ReadPosRankSum
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SIO_000300: -1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.23e-1

ClippingRankSum
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SIO_000300: 1.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

QD
type: SiteQuality
SIO_000300: 1.089e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9042
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.618133686300464e-5
allele num: 15110
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.307643965203585e-5
allele num: 60466
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.21e-1

ClippingRankSum
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SIO_000300: 1.9e-1

BaseQRankSum
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SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 9.87e-1

MQRankSum
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SIO_000300: -6.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.383896e6

QD
type: SiteQuality
SIO_000300: 1.275e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 609
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variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.3500127000254e-4
allele num: 7874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14986
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.234137622877569e-4
allele num: 8952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59972
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.356373e6

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

ClippingRankSum
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MQRankSum
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SIO_000300: -4.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.084e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

QD
type: SiteQuality
SIO_000300: 8.869999999999999e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7107
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 232
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7708
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8776
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.768647624204685e-5
allele num: 14774
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.719e-1

DP
type: SiteQuality
SIO_000300: 1.308286e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.376e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8161
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GenotypeQuality
all individuals: 346
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14458
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.116071428571429e-4
allele num: 8960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.270740363329702e-5
allele num: 56918
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7404
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 5.099e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.284422e6

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 345
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14440
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 8.192244675040961e-4
allele num: 7324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56522
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.28232e6

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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QD
type: SiteQuality
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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Other
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African
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East Asian
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European (Finnish)
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FS
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QD
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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MQ
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Other
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Latino
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African
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East Asian
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ClippingRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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QD
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele num: 6476
num of homozygotes: 0

East Asian
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South Asian
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African
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Latino
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Other
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European (Non-Finnish)
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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African
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DP
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QD
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MQ
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MQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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Other
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African
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East Asian
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.014318010550113e-5
allele num: 66350
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.941e1

VQSLOD
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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FS
type: SiteQuality
SIO_000300: 6.43e-1

ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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SIO_000300: 5.853e1

MQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -8.6e-1

DP
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FS
type: SiteQuality
SIO_000300: 7.986e0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 25

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Finnish)
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allele count: 6
allele frequency: 9.071666162685213e-4
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.805271392466001e-4
allele num: 66472
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.028467595396729e-4
allele num: 16510
num of homozygotes: 0

Other
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allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

FS
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SIO_000300: 1.396e0

VQSLOD
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BaseQRankSum
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SIO_000300: -1.162e0

InbreedingCoeff
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QD
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SIO_000300: 1.409e1

ClippingRankSum
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SIO_000300: -1.39e-1

DP
type: SiteQuality
SIO_000300: 1.840387e6

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

MQ
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SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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QD
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ReadPosRankSum
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FS
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DP
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VQSLOD
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MQ
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SIO_000300: 5.97e1

MQRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 9
allele frequency: 5.451241671714113e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

African
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East Asian
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allele count: 9
allele frequency: 1.043357291908185e-3
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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African
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VQSLOD
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FS
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ClippingRankSum
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InbreedingCoeff
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QD
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DP
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MQ
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.007157033740302e-5
allele num: 66508
num of homozygotes: 0

African
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South Asian
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European (Finnish)
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allele count: 0
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num of homozygotes: 0

Other
type: Population
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Latino
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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QD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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MQRankSum
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QD
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VQSLOD
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DP
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BaseQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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South Asian
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Latino
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European (Non-Finnish)
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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FS
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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European (Non-Finnish)
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European (Finnish)
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African
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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African
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InbreedingCoeff
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South Asian
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DP
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MQ
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all individuals: 4824
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3612
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8281
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10120
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66524
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e-1

FS
type: SiteQuality
SIO_000300: 7.629e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.841718e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

QD
type: SiteQuality
SIO_000300: 1.366e1

GenotypeDepth
all individuals: 183
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15531
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8276
bin: 6.75e1
variant carriers: 0