15-75631637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631637
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631637
    reference: chr 15
allele count: 1
allele frequency: 8.575152637716951e-6
allele num: 116616
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.334G>A
  hgvsp: ENSP00000267935.8:p.Glu112Lys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1307G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.491G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+611G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.720G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.350G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.937G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1010G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.334G>A
  hgvsp: ENSP00000340867.6:p.Glu112Lys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.352G>A
  hgvsp: ENSP00000455750.1:p.Glu118Lys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565517
  gene symbol: COMMD4
  hgvsc: ENST00000565517.1:n.525G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.286G>A
  hgvsp: ENSP00000455303.1:p.Glu96Lys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*245G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.282G>A
  hgvsp: ENST00000562610.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.334G>A
  hgvsp: ENSP00000433662.1:p.Glu112Lys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.822G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3234G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.415G>A
  hgvsp: ENSP00000454283.1:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.268G>A
  hgvsp: ENSP00000455249.1:p.Glu90Lys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.358G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu112Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

15-75631638-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631638
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631638
    reference: chr 15
allele count: 1
allele frequency: 8.574417368339821e-6
allele num: 116626
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+612A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.938A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.353A>G
  hgvsp: ENSP00000455750.1:p.Glu118Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.359A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.351A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.335A>G
  hgvsp: ENSP00000267935.8:p.Glu112Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.287A>G
  hgvsp: ENSP00000455303.1:p.Glu96Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565517
  gene symbol: COMMD4
  hgvsc: ENST00000565517.1:n.526A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.335A>G
  hgvsp: ENSP00000433662.1:p.Glu112Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.269A>G
  hgvsp: ENSP00000455249.1:p.Glu90Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.283A>G
  hgvsp: ENSP00000456440.1:p.Arg95Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.492A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+193A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.335A>G
  hgvsp: ENSP00000340867.6:p.Glu112Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.416A>G
  hgvsp: ENSP00000454283.1:p.Glu139Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3235A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.823A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*246A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1308A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1011A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu112Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

15-75631648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631648
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631648
    reference: chr 15
allele count: 1
allele frequency: 8.763627440670242e-6
allele num: 114108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.363C>T
  hgvsp: ENST00000562789.1:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+622C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*256C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.345C>T
  hgvsp: ENST00000267935.8:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.833C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565517
  gene symbol: COMMD4
  hgvsc: ENST00000565517.1:n.536C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.279C>T
  hgvsp: ENST00000564815.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.731C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.345C>T
  hgvsp: ENST00000338995.6:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3245C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.369C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.502C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.426C>T
  hgvsp: ENST00000568301.1:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1021C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.948C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.345C>T
  hgvsp: ENST00000480484.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.297C>T
  hgvsp: ENST00000567377.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.293C>T
  hgvsp: ENSP00000456440.1:p.Ala98Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+203C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1318C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala98Val
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

15-75631651-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631651
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631651
    reference: chr 15
allele count: 1
allele frequency: 8.874531868443939e-6
allele num: 112682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.364C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.429C>T
  hgvsp: ENST00000568301.1:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.282C>T
  hgvsp: ENST00000564815.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.300C>T
  hgvsp: ENST00000567377.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.366C>T
  hgvsp: ENST00000562789.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.505C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.348C>T
  hgvsp: ENST00000338995.6:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.951C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1024C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1321C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3248C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.296C>T
  hgvsp: ENSP00000456440.1:p.Pro99Leu
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.348C>T
  hgvsp: ENST00000267935.8:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*259C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.372C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.836C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+625C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.348C>T
  hgvsp: ENST00000480484.1:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+206C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.734C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro99Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

15-75631663-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631663
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631663
    reference: chr 15
allele count: 1
allele frequency: 9.192697321248e-6
allele num: 108782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.441C>G
  hgvsp: ENSP00000454283.1:p.His147Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.360C>G
  hgvsp: ENSP00000433662.1:p.His120Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.746C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.517C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.376C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3260C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.378C>G
  hgvsp: ENSP00000455750.1:p.His126Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.360C>G
  hgvsp: ENSP00000267935.8:p.His120Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.312C>G
  hgvsp: ENSP00000455303.1:p.His104Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1036C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.360C>G
  hgvsp: ENSP00000340867.6:p.His120Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.308C>G
  hgvsp: ENSP00000456440.1:p.Thr103Ser
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.384C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.963C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1333C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.294C>G
  hgvsp: ENSP00000455249.1:p.His98Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.848C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+637C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*271C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+218C>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.His120Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

15-75631667-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631667
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631667
    reference: chr 15
allele count: 2
allele frequency: 1.863863416088869e-5
allele num: 107304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.312C>T
  hgvsp: ENST00000562610.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+222C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1040C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.445C>T
  hgvsp: ENSP00000454283.1:p.Arg149Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.298C>T
  hgvsp: ENSP00000455249.1:p.Arg100Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1337C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.967C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.521C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.380C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.750C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.364C>T
  hgvsp: ENSP00000267935.8:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.316C>T
  hgvsp: ENSP00000455303.1:p.Arg106Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.382C>T
  hgvsp: ENSP00000455750.1:p.Arg128Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.364C>T
  hgvsp: ENSP00000340867.6:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.852C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3264C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.364C>T
  hgvsp: ENSP00000433662.1:p.Arg122Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.388C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*275C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+641C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg122Trp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

15-75631668-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631668
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631668
    reference: chr 15
allele count: 2
allele frequency: 1.869543270578997e-5
allele num: 106978
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.365G>A
  hgvsp: ENSP00000267935.8:p.Arg122Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+223G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.299G>A
  hgvsp: ENSP00000455249.1:p.Arg100Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1338G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+642G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.751G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.446G>A
  hgvsp: ENSP00000454283.1:p.Arg149Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.853G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.317G>A
  hgvsp: ENSP00000455303.1:p.Arg106Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3265G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.389G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*276G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.365G>A
  hgvsp: ENSP00000340867.6:p.Arg122Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.381G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1041G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.313G>A
  hgvsp: ENSP00000456440.1:p.Gly105Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.365G>A
  hgvsp: ENSP00000433662.1:p.Arg122Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.383G>A
  hgvsp: ENSP00000455750.1:p.Arg128Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.522G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.968G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg122Gln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

15-75631672-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631672
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631672
    reference: chr 15
allele count: 1
allele frequency: 9.494692466910997e-6
allele num: 105322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.369C>G
  hgvsp: ENST00000338995.6:c.369C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*280C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.526C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.387C>G
  hgvsp: ENST00000562789.1:c.387C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.972C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.369C>G
  hgvsp: ENST00000480484.1:c.369C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1045C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.317C>G
  hgvsp: ENSP00000456440.1:p.Ser106Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.321C>G
  hgvsp: ENST00000567377.1:c.321C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.393C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1342C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3269C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.303C>G
  hgvsp: ENST00000564815.1:c.303C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.369C>G
  hgvsp: ENST00000267935.8:c.369C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.385C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.450C>G
  hgvsp: ENST00000568301.1:c.450C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+227C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.755C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.857C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+646C>G
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser106Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

15-75631672-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631672
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631672
    reference: chr 15
allele count: 8
allele frequency: 7.595753973528798e-5
allele num: 105322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+227C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.387C>T
  hgvsp: ENST00000562789.1:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.972C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.857C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1342C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.369C>T
  hgvsp: ENST00000338995.6:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3269C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*280C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.321C>T
  hgvsp: ENST00000567377.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1045C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.303C>T
  hgvsp: ENST00000564815.1:c.303C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.385C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.526C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.450C>T
  hgvsp: ENST00000568301.1:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.393C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.369C>T
  hgvsp: ENST00000267935.8:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.369C>T
  hgvsp: ENST00000480484.1:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.317C>T
  hgvsp: ENSP00000456440.1:p.Ser106Phe
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.755C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+646C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser106Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

15-75631681-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631681
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631681
    reference: chr 15
allele count: 2099
allele frequency: 2.04852435977514e-2
allele num: 102464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.396A>G
  hgvsp: ENST00000562789.1:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.330A>G
  hgvsp: ENST00000567377.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.402A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.312A>G
  hgvsp: ENST00000564815.1:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.981A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.459A>G
  hgvsp: ENST00000568301.1:c.459A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1351A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.378A>G
  hgvsp: ENST00000338995.6:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3278A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.764A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.394A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.326A>G
  hgvsp: ENSP00000456440.1:p.Tyr109Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+236A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.378A>G
  hgvsp: ENST00000267935.8:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.378A>G
  hgvsp: ENST00000480484.1:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.866A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+655A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*289A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.535A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1054A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Tyr109Cys
num of homozygotes: 110
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

15-75631682-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631682
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631682
    reference: chr 15
allele count: 1
allele frequency: 9.856489512695158e-6
allele num: 101456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.867C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+237C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1055C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.765C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.379C>T
  hgvsp: ENSP00000340867.6:p.Arg127Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.331C>T
  hgvsp: ENSP00000455303.1:p.Arg111Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.379C>T
  hgvsp: ENSP00000267935.8:p.Arg127Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*290C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.403C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.460C>T
  hgvsp: ENSP00000454283.1:p.Arg154Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.397C>T
  hgvsp: ENSP00000455750.1:p.Arg133Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3279C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.313C>T
  hgvsp: ENSP00000455249.1:p.Arg105Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.395C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.327C>T
  hgvsp: ENST00000562610.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.379C>T
  hgvsp: ENSP00000433662.1:p.Arg127Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.982C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+656C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.536C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1352C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg127Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

15-75631683-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631683
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631683
    reference: chr 15
allele count: 1
allele frequency: 9.900401956319427e-6
allele num: 101006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.398G>A
  hgvsp: ENSP00000455750.1:p.Arg133His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.328G>A
  hgvsp: ENSP00000456440.1:p.Ala110Thr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.868G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.332G>A
  hgvsp: ENSP00000455303.1:p.Arg111His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+657G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3280G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.461G>A
  hgvsp: ENSP00000454283.1:p.Arg154His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+238G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.314G>A
  hgvsp: ENSP00000455249.1:p.Arg105His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.537G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1056G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.983G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.766G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.380G>A
  hgvsp: ENSP00000267935.8:p.Arg127His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1353G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*291G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.380G>A
  hgvsp: ENSP00000433662.1:p.Arg127His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.396G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.404G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg127His
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

15-75631685-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631685
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631685
    reference: chr 15
allele count: 1
allele frequency: 9.990209594597294e-6
allele num: 100098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.985A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+240A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463A>G
  hgvsp: ENSP00000454283.1:p.Met155Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382A>G
  hgvsp: ENSP00000433662.1:p.Met128Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316A>G
  hgvsp: ENSP00000455249.1:p.Met106Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330A>G
  hgvsp: ENST00000562610.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.768A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382A>G
  hgvsp: ENSP00000340867.6:p.Lys128Glu
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382A>G
  hgvsp: ENSP00000267935.8:p.Met128Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.539A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400A>G
  hgvsp: ENSP00000455750.1:p.Lys134Glu
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334A>G
  hgvsp: ENSP00000455303.1:p.Met112Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3282A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+659A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1355A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1058A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Met128Val
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

15-75631706-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631706
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631706
    reference: chr 15
allele count: 1
allele frequency: 1.058223454464645e-5
allele num: 94498
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+680G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1006G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1079G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3303G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.789G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.891G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.560G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+261G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1376G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+21G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+21G>C
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-75631709-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631709
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631709
    reference: chr 15
allele count: 1
allele frequency: 1.066461905980718e-5
allele num: 93768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+683C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+264C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.894C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.792C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3306C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1379C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1082C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1009C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.563C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+24C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

15-75631710-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631710
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631710
    reference: chr 15
allele count: 13
allele frequency: 1.399534923779175e-4
allele num: 92888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.793C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1083C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.895C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1010C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3307C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+265C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+684C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.564C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1380C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+25C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+25C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

15-75631711-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631711
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631711
    reference: chr 15
allele count: 11
allele frequency: 1.187802349689012e-4
allele num: 92608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.896G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3308G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+266G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.794G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1084G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1011G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1381G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.565G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+26G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+685G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

15-75631719-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631719
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631719
    reference: chr 15
allele count: 9
allele frequency: 9.977163381593243e-5
allele num: 90206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1019T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+274T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.904T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.802T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3316T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1092T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1389T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+693T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+34T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.573T>C
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

15-75631722-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631722
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631722
    reference: chr 15
allele count: 155
allele frequency: 1.740947075208914e-3
allele num: 89032
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.805A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3319A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1392A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1022A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.576A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.907A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+277A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+696A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1095A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+37A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+37A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

15-75631723-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631723
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631723
    reference: chr 15
allele count: 1
allele frequency: 1.14621062766494e-5
allele num: 87244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1393G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1096G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.908G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+278G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3320G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.806G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+697G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.577G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1023G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+38G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+38G>C
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

15-75631726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631726
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631726
    reference: chr 15
allele count: 1
allele frequency: 1.172827922687183e-5
allele num: 85264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1396G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.580G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+700G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.911G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1026G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+281G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.809G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3323G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+41G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1099G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-75631729-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631729
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631729
    reference: chr 15
allele count: 3
allele frequency: 3.600144005760231e-5
allele num: 83330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1399G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3326G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.914G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+703G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.583G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.812G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1029G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+284G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1102G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+44G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+44G>T
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

15-75631732-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631732
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631732
    reference: chr 15
allele count: 6
allele frequency: 7.325291790789666e-5
allele num: 81908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1105C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.815C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1032C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3329C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1402C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.917C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.586C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+706C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+47C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+287C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

15-75631733-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631733
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631733
    reference: chr 15
allele count: 1
allele frequency: 1.235177865612648e-5
allele num: 80960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.334+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.330+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567399
  gene symbol: COMMD4
  hgvsc: ENST00000567399.1:n.816G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.316+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1106G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1033G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000568877
  gene symbol: COMMD4
  hgvsc: ENST00000568877.1:n.587G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.382+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1403G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567023
  gene symbol: COMMD4
  hgvsc: ENST00000567023.1:n.918G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.463+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.398+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3330G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+707G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.406+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*293+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.382+48G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.301+288G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/15-75631994-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75631994
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75631994
    reference: chr 15
allele count: 1
allele frequency: 9.232246390191662e-6
allele num: 108316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-312A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.407-49A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.383-49A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3591A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+968A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.464-49A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*294-49A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1664A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.331-49A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.335-49A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1367A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.383-49A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1294A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.382+309A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.317-49A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.400+309A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.399-49A>C
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16189
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

15-75632000-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632000
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632000
    reference: chr 15
allele count: 3
allele frequency: 2.768344898863133e-5
allele num: 108368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-306C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3597C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.317-43C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1300C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*294-43C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1373C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.383-43C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-306C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+974C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.335-43C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.464-43C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-306C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.331-43C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.383-43C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.399-43C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1670C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.407-43C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16567
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18125
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

15-75632003-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632003
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632003
    reference: chr 15
allele count: 1
allele frequency: 9.223560663358482e-6
allele num: 108418
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1303G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+977G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.383-40G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-303G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3600G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.335-40G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-303G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.464-40G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-303G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.399-40G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1673G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1376G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.407-40G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.317-40G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.331-40G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*294-40G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.383-40G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6079
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-75632014-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632014
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632014
    reference: chr 15
allele count: 7
allele frequency: 6.430631855512889e-5
allele num: 108854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+988T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-292T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.335-29T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.399-29T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3611T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*294-29T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1684T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.383-29T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-292T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.317-29T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.407-29T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1314T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-292T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1387T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.464-29T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.383-29T>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.331-29T>C
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

15-75632015-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632015
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632015
    reference: chr 15
allele count: 2
allele frequency: 1.837222120154327e-5
allele num: 108860
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.383-28C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1315C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.399-28C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-291C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.464-28C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-291C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-291C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.317-28C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1685C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.335-28C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1388C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+989C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3612C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.331-28C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.407-28C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.383-28C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*294-28C>G
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/15-75632029-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632029
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632029
    reference: chr 15
allele count: 1
allele frequency: 9.09487776484284e-6
allele num: 109952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-277A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.399-14A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.335-14A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-277A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1329A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1699A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.407-14A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.331-14A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3626A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1402A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-277A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.317-14A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*294-14A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.383-14A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1003A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.383-14A>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.464-14A>C
  variant of: http://identifiers.org/hgnc/26027
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-75632036-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632036
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632036
    reference: chr 15
allele count: 1
allele frequency: 9.047317470370035e-6
allele num: 110530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1336C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3633C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.383-7C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.407-7C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-270C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.317-7C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.399-7C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.331-7C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.464-7C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*294-7C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-270C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1706C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.335-7C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-270C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1409C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1010C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.383-7C>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19552
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.383-7C>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

15-75632041-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632041
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632041
    reference: chr 15
allele count: 1
allele frequency: 9.008684371734351e-6
allele num: 111004
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.464-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.383-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-265A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.407-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.399-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1015A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*294-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3638A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1711A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.331-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1414A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.383-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1341A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.317-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-265A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.335-2A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-265A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23273
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.383-2A>G
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

15-75632053-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632053
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632053
    reference: chr 15
allele count: 1
allele frequency: 8.953032392071195e-6
allele num: 111694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1353G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3650G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.345G>A
  hgvsp: ENST00000567377.1:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.327G>A
  hgvsp: ENST00000564815.1:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.474G>A
  hgvsp: ENST00000568301.1:c.474G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.417G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1027G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.393G>A
  hgvsp: ENST00000480484.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.393G>A
  hgvsp: ENST00000267935.8:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1723G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-253G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1426G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.409G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-253G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-253G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*304G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22851
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu131Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

15-75632057-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632057
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632057
    reference: chr 15
allele count: 1
allele frequency: 8.902816851251736e-6
allele num: 112324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-249G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3654G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*12G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.397G>C
  hgvsp: ENSP00000267935.8:p.Gly133Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.478G>C
  hgvsp: ENSP00000454283.1:p.Gly160Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1031G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.349G>C
  hgvsp: ENSP00000455303.1:p.Gly117Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1430G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*308G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1357G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.397G>C
  hgvsp: ENSP00000433662.1:p.Gly133Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.331G>C
  hgvsp: ENSP00000455249.1:p.Gly111Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1727G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.421G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-249G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.413G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-249G>C
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly133Arg
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

15-75632058-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632058
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632058
    reference: chr 15
allele count: 1
allele frequency: 8.89584741842508e-6
allele num: 112412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.422G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.398G>A
  hgvsp: ENSP00000267935.8:p.Gly133Asp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3655G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.479G>A
  hgvsp: ENSP00000454283.1:p.Gly160Asp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*309G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*13G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1358G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1728G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.398G>A
  hgvsp: ENSP00000433662.1:p.Gly133Asp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.350G>A
  hgvsp: ENSP00000455303.1:p.Gly117Asp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.332G>A
  hgvsp: ENSP00000455249.1:p.Gly111Asp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1431G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-248G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-248G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.414G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-248G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1032G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly133Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

15-75632058-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632058
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632058
    reference: chr 15
allele count: 1
allele frequency: 8.89584741842508e-6
allele num: 112412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.422G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.350G>T
  hgvsp: ENSP00000455303.1:p.Gly117Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*309G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1728G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-248G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.479G>T
  hgvsp: ENSP00000454283.1:p.Gly160Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.398G>T
  hgvsp: ENSP00000267935.8:p.Gly133Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*13G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.332G>T
  hgvsp: ENSP00000455249.1:p.Gly111Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.414G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.398G>T
  hgvsp: ENSP00000433662.1:p.Gly133Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1358G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1431G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-248G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-248G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1032G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3655G>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly133Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

15-75632069-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632069
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632069
    reference: chr 15
allele count: 2
allele frequency: 1.762549351381839e-5
allele num: 113472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*320C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-237C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.409C>T
  hgvsp: ENSP00000267935.8:p.Arg137Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3666C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-237C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.490C>T
  hgvsp: ENSP00000454283.1:p.Arg164Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.361C>T
  hgvsp: ENSP00000455303.1:p.Arg121Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.409C>T
  hgvsp: ENSP00000433662.1:p.Arg137Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1043C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1369C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.343C>T
  hgvsp: ENSP00000455249.1:p.Arg115Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.425C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.433C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-237C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1739C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1442C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg137Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD

15-75632070-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632070
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632070
    reference: chr 15
allele count: 4
allele frequency: 3.505205229766203e-5
allele num: 114116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-236G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1370G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.410G>A
  hgvsp: ENSP00000267935.8:p.Arg137Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.426G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.410G>A
  hgvsp: ENSP00000433662.1:p.Arg137Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*321G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.491G>A
  hgvsp: ENSP00000454283.1:p.Arg164Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-236G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3667G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1443G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.344G>A
  hgvsp: ENSP00000455249.1:p.Arg115Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.362G>A
  hgvsp: ENSP00000455303.1:p.Arg121Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1740G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.434G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-236G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1044G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*25G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22118
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg137Gln
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

15-75632072-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632072
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632072
    reference: chr 15
allele count: 2
allele frequency: 1.745779577870498e-5
allele num: 114562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.346G>A
  hgvsp: ENSP00000455249.1:p.Val116Met
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.412G>A
  hgvsp: ENSP00000267935.8:p.Val138Met
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3669G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.493G>A
  hgvsp: ENSP00000454283.1:p.Val165Met
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-234G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*323G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.436G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*27G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.428G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.412G>A
  hgvsp: ENSP00000433662.1:p.Val138Met
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1372G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.364G>A
  hgvsp: ENSP00000455303.1:p.Val122Met
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1742G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-234G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1046G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1445G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-234G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val138Met
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS

15-75632073-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632073
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632073
    reference: chr 15
allele count: 97
allele frequency: 8.973671064073862e-4
allele num: 108094
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3670T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.494T>G
  hgvsp: ENSP00000454283.1:p.Val165Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.413T>G
  hgvsp: ENSP00000267935.8:p.Val138Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1743T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.347T>G
  hgvsp: ENSP00000455249.1:p.Val116Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*28T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.437T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.413T>G
  hgvsp: ENSP00000433662.1:p.Val138Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*324T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.365T>G
  hgvsp: ENSP00000455303.1:p.Val122Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1373T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.429T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-233T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-233T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-233T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1446T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1047T>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 19964
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val138Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

15-75632076-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632076
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632076
    reference: chr 15
allele count: 3
allele frequency: 2.595335317322998e-5
allele num: 115592
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.368A>G
  hgvsp: ENSP00000455303.1:p.Asp123Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3673A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.350A>G
  hgvsp: ENSP00000455249.1:p.Asp117Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-230A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*31A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.416A>G
  hgvsp: ENSP00000433662.1:p.Asp139Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1746A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.440A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.416A>G
  hgvsp: ENSP00000267935.8:p.Asp139Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.497A>G
  hgvsp: ENSP00000454283.1:p.Asp166Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1449A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1376A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*327A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.432A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-230A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1050A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-230A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp139Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

15-75632085-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632085
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632085
    reference: chr 15
allele count: 1
allele frequency: 8.514841368505305e-6
allele num: 117442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.377T>A
  hgvsp: ENSP00000455303.1:p.Leu126Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-221T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3682T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1385T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-221T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1059T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.425T>A
  hgvsp: ENSP00000433662.1:p.Leu142Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.441T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.359T>A
  hgvsp: ENSP00000455249.1:p.Leu120Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*336T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*40T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.425T>A
  hgvsp: ENSP00000267935.8:p.Leu142Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1458T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.449T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-221T>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.506T>A
  hgvsp: ENSP00000454283.1:p.Leu169Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1755T>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu142Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

15-75632088-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632088
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632088
    reference: chr 15
allele count: 1
allele frequency: 8.489252606200551e-6
allele num: 117796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.380G>T
  hgvsp: ENSP00000455303.1:p.Ser127Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*43G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-218G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.428G>T
  hgvsp: ENSP00000267935.8:p.Ser143Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1461G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*339G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.509G>T
  hgvsp: ENSP00000454283.1:p.Ser170Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.362G>T
  hgvsp: ENSP00000455249.1:p.Ser121Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-218G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1062G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-218G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.428G>T
  hgvsp: ENSP00000433662.1:p.Ser143Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1758G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1388G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3685G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.452G>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.444G>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7341
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser143Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

15-75632089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632089
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632089
    reference: chr 15
allele count: 2
allele frequency: 1.69586378822053e-5
allele num: 117934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3686C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.429C>T
  hgvsp: ENST00000480484.1:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*340C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.381C>T
  hgvsp: ENST00000567377.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1759C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-217C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.445C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.453C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-217C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1462C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.363C>T
  hgvsp: ENST00000564815.1:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1389C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.429C>T
  hgvsp: ENST00000267935.8:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.510C>T
  hgvsp: ENST00000568301.1:c.510C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*44C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-217C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1063C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser143Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-75632091-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632091
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632091
    reference: chr 15
allele count: 1
allele frequency: 8.446802040747373e-6
allele num: 118388
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-215C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.431C>A
  hgvsp: ENSP00000267935.8:p.Ser144Tyr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.431C>A
  hgvsp: ENSP00000433662.1:p.Ser144Tyr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1065C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.365C>A
  hgvsp: ENSP00000455249.1:p.Ser122Tyr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.447C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.512C>A
  hgvsp: ENSP00000454283.1:p.Ser171Tyr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1761C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-215C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1464C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*46C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.383C>A
  hgvsp: ENSP00000455303.1:p.Ser128Tyr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-215C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3688C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.455C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1391C>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*342C>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser144Tyr
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

15-75632091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632091
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632091
    reference: chr 15
allele count: 1
allele frequency: 8.446802040747373e-6
allele num: 118388
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3688C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.132+1065C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.431C>T
  hgvsp: ENSP00000267935.8:p.Ser144Phe
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.455C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.512C>T
  hgvsp: ENSP00000454283.1:p.Ser171Phe
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.447C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.431C>T
  hgvsp: ENSP00000433662.1:p.Ser144Phe
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*342C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.365C>T
  hgvsp: ENSP00000455249.1:p.Ser122Phe
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1391C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.383C>T
  hgvsp: ENSP00000455303.1:p.Ser128Phe
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-215C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1464C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-215C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-215C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1761C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser144Phe
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

15-75632103-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632103
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632103
    reference: chr 15
allele count: 2
allele frequency: 1.670927531872943e-5
allele num: 119694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-203A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.443A>G
  hgvsp: ENSP00000433662.1:p.Gln148Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457348
  ensembl transcript: ENST00000567720
  gene symbol: COMMD4
  hgvsc: ENST00000567720.1:c.*354A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.395A>G
  hgvsp: ENSP00000455303.1:p.Gln132Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-203A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3700A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.459A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.377A>G
  hgvsp: ENSP00000455249.1:p.Gln126Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1403A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*58A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1773A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.524A>G
  hgvsp: ENSP00000454283.1:p.Gln175Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.443A>G
  hgvsp: ENSP00000267935.8:p.Gln148Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1476A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.467A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1067A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-203A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln148Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

15-75632107-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632107
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632107
    reference: chr 15
allele count: 19
allele frequency: 1.584918251584918e-4
allele num: 119880
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.447C>G
  hgvsp: ENST00000267935.8:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1777C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-199C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.528C>G
  hgvsp: ENST00000568301.1:c.528C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*62C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3704C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1480C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.471C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.447C>G
  hgvsp: ENST00000480484.1:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-199C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1407C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455303
  ensembl transcript: ENST00000567377
  gene symbol: COMMD4
  hgvsc: ENST00000567377.1:c.399C>G
  hgvsp: ENST00000567377.1:c.399C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.381C>G
  hgvsp: ENST00000564815.1:c.381C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1063C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-199C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.463C>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23824
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser149Ser
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

15-75632122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632122
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632122
    reference: chr 15
allele count: 1
allele frequency: 8.310893919750009e-6
allele num: 120324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1048G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3719G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.396G>A
  hgvsp: ENSP00000455249.1:p.Met132Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.462G>A
  hgvsp: ENSP00000267935.8:p.Met154Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1422G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-184G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*77G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.462G>A
  hgvsp: ENSP00000433662.1:p.Met154Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-184G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1792G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.486G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.543G>A
  hgvsp: ENSP00000454283.1:p.Met181Ile
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1495G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.478G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-184G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met154Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-75632132-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632132
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632132
    reference: chr 15
allele count: 2
allele frequency: 1.669003271246412e-5
allele num: 119832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-174C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.472C>T
  hgvsp: ENSP00000267935.8:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.488C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.496C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.472C>T
  hgvsp: ENSP00000433662.1:p.Arg158Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1802C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1432C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*87C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3729C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.406C>T
  hgvsp: ENSP00000455249.1:p.Arg136Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.553C>T
  hgvsp: ENSP00000454283.1:p.Arg185Trp
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-174C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1505C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1038C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-174C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg158Trp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

15-75632133-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632133
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632133
    reference: chr 15
allele count: 4
allele frequency: 3.337672307332866e-5
allele num: 119844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1803G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3730G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.473G>A
  hgvsp: ENSP00000267935.8:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.407G>A
  hgvsp: ENSP00000455249.1:p.Arg136Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.473G>A
  hgvsp: ENSP00000433662.1:p.Arg158Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-173G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.554G>A
  hgvsp: ENSP00000454283.1:p.Arg185Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*88G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1433G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1037G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1506G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.489G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.497G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-173G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-173G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg158Gln
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

15-75632138-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632138
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632138
    reference: chr 15
allele count: 1
allele frequency: 8.318775476249896e-6
allele num: 120210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-168G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.478G>C
  hgvsp: ENSP00000267935.8:p.Glu160Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1511G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*93G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.559G>C
  hgvsp: ENSP00000454283.1:p.Glu187Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1032G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1438G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.478G>C
  hgvsp: ENSP00000433662.1:p.Glu160Gln
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-168G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.494G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-168G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1808G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.502G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3735G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.412G>C
  hgvsp: ENSP00000455249.1:p.Glu138Gln
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu160Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ

15-75632139-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632139
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632139
    reference: chr 15
allele count: 4
allele frequency: 3.354747806833622e-5
allele num: 119234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.479A>G
  hgvsp: ENSP00000433662.1:p.Glu160Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.479A>G
  hgvsp: ENSP00000267935.8:p.Glu160Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.413A>G
  hgvsp: ENSP00000455249.1:p.Glu138Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.503A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1439A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-167A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1512A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-167A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1809A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.560A>G
  hgvsp: ENSP00000454283.1:p.Glu187Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-167A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1031A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3736A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.495A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23153
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu160Gly
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

15-75632142-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632142
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632142
    reference: chr 15
allele count: 3
allele frequency: 2.505805115183508e-5
allele num: 119722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.498T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.506T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.563T>G
  hgvsp: ENSP00000454283.1:p.Val188Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.416T>G
  hgvsp: ENSP00000455249.1:p.Val139Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*97T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.482T>G
  hgvsp: ENSP00000267935.8:p.Val161Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1442T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1812T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.482T>G
  hgvsp: ENSP00000433662.1:p.Val161Gly
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-164T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3739T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1028T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-164T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1515T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-164T>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7345
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val161Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

15-75632147-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632147
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632147
    reference: chr 15
allele count: 9
allele frequency: 7.486648809622839e-5
allele num: 120214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*102G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.511G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.487G>A
  hgvsp: ENSP00000267935.8:p.Ala163Thr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.487G>A
  hgvsp: ENSP00000433662.1:p.Ala163Thr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.568G>A
  hgvsp: ENSP00000454283.1:p.Ala190Thr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.421G>A
  hgvsp: ENSP00000455249.1:p.Ala141Thr
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1817G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-159G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1520G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-159G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1447G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.503G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1023G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-159G>A
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3744G>A
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala163Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

15-75632153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632153
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632153
    reference: chr 15
allele count: 19
allele frequency: 1.578413943210328e-4
allele num: 120374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.509C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1453C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.493C>T
  hgvsp: ENSP00000433662.1:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.517C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1823C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3750C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.574C>T
  hgvsp: ENSP00000454283.1:p.Pro192Ser
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-153C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-153C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.493C>T
  hgvsp: ENSP00000267935.8:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1017C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-153C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.427C>T
  hgvsp: ENSP00000455249.1:p.Pro143Ser
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*108C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1526C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24715
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro165Ser
num of homozygotes: 1
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

15-75632159-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632159
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632159
    reference: chr 15
allele count: 1
allele frequency: 8.302613662781043e-6
allele num: 120444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1459A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.580A>G
  hgvsp: ENSP00000454283.1:p.Thr194Ala
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.499A>G
  hgvsp: ENSP00000433662.1:p.Thr167Ala
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.499A>G
  hgvsp: ENSP00000267935.8:p.Thr167Ala
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*114A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1829A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.515A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.433A>G
  hgvsp: ENSP00000455249.1:p.Thr145Ala
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-147A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-147A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1011A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3756A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1532A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.523A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-147A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23539
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr167Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

15-75632166-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632166
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632166
    reference: chr 15
allele count: 2
allele frequency: 1.657797450307521e-5
allele num: 120642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.522C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.530C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.506C>T
  hgvsp: ENSP00000267935.8:p.Ala169Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1539C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.587C>T
  hgvsp: ENSP00000454283.1:p.Ala196Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.440C>T
  hgvsp: ENSP00000455249.1:p.Ala147Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.506C>T
  hgvsp: ENSP00000433662.1:p.Ala169Val
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-140C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*121C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1004C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-140C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3763C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1836C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-140C>T
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1466C>T
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala169Val
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-75632170-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632170
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632170
    reference: chr 15
allele count: 46
allele frequency: 3.811354522254996e-4
allele num: 120692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.534G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*125G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.526G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.510G>C
  hgvsp: ENSP00000267935.8:p.Gln170His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1543G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1470G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-136G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.591G>C
  hgvsp: ENSP00000454283.1:p.Gln197His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-136G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-136G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.510G>C
  hgvsp: ENSP00000433662.1:p.Gln170His
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1840G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3767G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-1000G>C
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.444G>C
  hgvsp: ENSP00000455249.1:p.Gln148His
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln170His
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

15-75632184-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632184
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632184
    reference: chr 15
allele count: 12
allele frequency: 9.936242444315642e-5
allele num: 120770
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.524C>G
  hgvsp: ENSP00000433662.1:p.Ser175Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-122C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-986C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1557C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.540C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1484C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*139C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.524C>G
  hgvsp: ENSP00000267935.8:p.Ser175Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3781C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.605C>G
  hgvsp: ENSP00000454283.1:p.Ser202Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-122C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.458C>G
  hgvsp: ENSP00000455249.1:p.Ser153Cys
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-122C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.548C>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1854C>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser175Cys
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

15-75632187-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632187
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632187
    reference: chr 15
allele count: 1
allele frequency: 8.277049397430804e-6
allele num: 120816
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-119T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3784T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.543T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-983T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1560T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.608T>G
  hgvsp: ENSP00000454283.1:p.Leu203Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*142T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1857T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.551T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.527T>G
  hgvsp: ENSP00000433662.1:p.Leu176Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.527T>G
  hgvsp: ENSP00000267935.8:p.Leu176Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1487T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.461T>G
  hgvsp: ENSP00000455249.1:p.Leu154Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-119T>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-119T>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu176Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

15-75632199-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75632199
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75632199
    reference: chr 15
allele count: 1
allele frequency: 8.274309922552459e-6
allele num: 120856
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000457693
  ensembl transcript: ENST00000567195
  gene symbol: COMMD4
  hgvsc: ENST00000567195.1:c.302-107A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000565834
  gene symbol: COMMD4
  hgvsc: ENST00000565834.1:n.1499A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000267935
  ensembl transcript: ENST00000267935
  gene symbol: COMMD4
  hgvsc: ENST00000267935.8:c.539A>G
  hgvsp: ENSP00000267935.8:p.Lys180Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000456440
  ensembl transcript: ENST00000562610
  gene symbol: COMMD4
  hgvsc: ENST00000562610.1:c.*154A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000563220
  gene symbol: COMMD4
  hgvsc: ENST00000563220.1:n.1572A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000569245
  gene symbol: COMMD4
  hgvsc: ENST00000569245.1:n.555A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000454283
  ensembl transcript: ENST00000568301
  gene symbol: COMMD4
  hgvsc: ENST00000568301.1:c.620A>G
  hgvsp: ENSP00000454283.1:p.Lys207Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000566843
  gene symbol: COMMD4
  hgvsc: ENST00000566843.1:n.1869A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455249
  ensembl transcript: ENST00000564815
  gene symbol: COMMD4
  hgvsc: ENST00000564815.1:c.473A>G
  hgvsp: ENSP00000455249.1:p.Lys158Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000340867
  ensembl transcript: ENST00000338995
  gene symbol: COMMD4
  hgvsc: ENST00000338995.6:c.383-107A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000433662
  ensembl transcript: ENST00000480484
  gene symbol: COMMD4
  hgvsc: ENST00000480484.1:c.539A>G
  hgvsp: ENSP00000433662.1:p.Lys180Arg
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000564068
  gene symbol: COMMD4
  hgvsc: ENST00000564068.1:n.3796A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000567935
  gene symbol: COMMD4
  hgvsc: ENST00000567935.1:n.133-971A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140365
  ensembl transcript: ENST00000562310
  gene symbol: COMMD4
  hgvsc: ENST00000562310.1:n.563A>G
  variant of: http://identifiers.org/hgnc/26027
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140365
  ensembl protein: ENSP00000455750
  ensembl transcript: ENST00000562789
  gene symbol: COMMD4
  hgvsc: ENST00000562789.1:c.401-107A>G
  variant of: http://identifiers.org/hgnc/26027
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys180Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000140365
ensembl protein: ENSP00000457693
ensembl transcript: ENST00000567195
gene symbol: COMMD4
hgvsc: ENST00000567195.1:c.301+192G>A
variant of: http://identifiers.org/hgnc/26027

GenotypeDepth
all individuals: 5965
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 736
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15767
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2836
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1107
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 607
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1308
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25373
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 975
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 920
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2304
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1206
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4104
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37052
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6287
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557632398753894e-5
allele num: 64200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.777472e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

FS
type: SiteQuality
SIO_000300: 2.328e0

VQSLOD
type: SiteQuality
SIO_000300: -2.403e0

QD
type: SiteQuality
SIO_000300: 1.384e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.836e0

MQ
type: SiteQuality
SIO_000300: 4.278e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000140365
ensembl transcript: ENST00000567399
gene symbol: COMMD4
hgvsc: ENST00000567399.1:n.721A>G
variant of: http://identifiers.org/hgnc/26027

GenotypeDepth
all individuals: 2313
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2831
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5946
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 736
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 608
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1312
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 919
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1105
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15819
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25345
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1206
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5666
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4118
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6286
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 417
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6064
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9812
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.984725965858041e-5
allele num: 11130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16142
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.338e0

DP
type: SiteQuality
SIO_000300: 1.777152e6

FS
type: SiteQuality
SIO_000300: 5.341e0

MQRankSum
type: SiteQuality
SIO_000300: 6.97e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.895e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

MQ
type: SiteQuality
SIO_000300: 4.103e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000140365
ensembl transcript: ENST00000569245
gene symbol: COMMD4
hgvsc: ENST00000569245.1:n.361C>T
variant of: http://identifiers.org/hgnc/26027

GenotypeDepth
all individuals: 1276
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1616
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3490
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 607
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 99
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1094
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 736
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14754
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23220
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1206
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 919
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4694
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5456
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33940
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6279
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15930
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591596371160274e-5
allele num: 62830
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

DP
type: SiteQuality
SIO_000300: 1.720565e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 1.432e1

FS
type: SiteQuality
SIO_000300: 1.0055e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

MQ
type: SiteQuality
SIO_000300: 4.027e1

VQSLOD
type: SiteQuality
SIO_000300: -3.194e0

GenotypeDepth
all individuals: 607
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 736
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1206
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14278
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5744
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2048
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 919
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 114
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21870
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1089
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4159
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1243
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6272
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4712
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31320
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7488
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9490
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.33184023889511e-5
allele num: 10716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15808
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.687463e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.36e-1

MQ
type: SiteQuality
SIO_000300: 3.933e1

FS
type: SiteQuality
SIO_000300: 2.722e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

QD
type: SiteQuality
SIO_000300: 1.203e1

VQSLOD
type: SiteQuality
SIO_000300: -2.619e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.607e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

GenotypeDepth
all individuals: 17134
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3406
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1174
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6048
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 607
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 917
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1081
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3862
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 736
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8887
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 206
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13900
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1206
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1128
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25662
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.088613106901807e-4
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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Latino
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Other
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ReadPosRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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FS
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MQRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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European (Finnish)
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Other
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African
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Latino
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European (Non-Finnish)
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South Asian
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MQ
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 58794
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Other
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Latino
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allele count: 0
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African
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East Asian
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FS
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VQSLOD
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MQRankSum
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QD
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DP
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ReadPosRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Latino
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African
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East Asian
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Other
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European (Non-Finnish)
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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DP
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VQSLOD
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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Latino
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European (Finnish)
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African
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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DP
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2033
bin: 3.75e1
variant carriers: 12

GenotypeQuality
all individuals: 195
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2265
bin: 6.75e1
variant carriers: 21

GenotypeQuality
all individuals: 122
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 623
bin: 5.75e1
variant carriers: 21

GenotypeQuality
all individuals: 701
bin: 4.25e1
variant carriers: 12

GenotypeQuality
all individuals: 3316
bin: 2.75e1
variant carriers: 14

GenotypeQuality
all individuals: 630
bin: 7.25e1
variant carriers: 16

GenotypeQuality
all individuals: 322
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 532
bin: 8.25e1
variant carriers: 22

GenotypeQuality
all individuals: 292
bin: 8.75e1
variant carriers: 10

GenotypeQuality
all individuals: 16211
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 18162
bin: 6.25e1
variant carriers: 15

GenotypeQuality
all individuals: 735
bin: 7.75e1
variant carriers: 15

African
type: Population
allele count: 233
allele frequency: 2.67816091954023e-2
allele num: 8700
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 4.611564384533522e-4
allele num: 56380
num of homozygotes: 1

Latino
type: Population
allele count: 1375
allele frequency: 1.459970269696326e-1
allele num: 9418
num of homozygotes: 96

South Asian
type: Population
allele count: 139
allele frequency: 9.302636862535137e-3
allele num: 14942
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5060
num of homozygotes: 0

East Asian
type: Population
allele count: 319
allele frequency: 4.429325187447931e-2
allele num: 7202
num of homozygotes: 5

Other
type: Population
allele count: 7
allele frequency: 9.186351706036745e-3
allele num: 762
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.45e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

FS
type: SiteQuality
SIO_000300: 6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

DP
type: SiteQuality
SIO_000300: 1.433922e6

QD
type: SiteQuality
SIO_000300: 1.386e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

MQ
type: SiteQuality
SIO_000300: 3.876e1

GenotypeDepth
all individuals: 240
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2177
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 318
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 409
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 152
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1006
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10560
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 903
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 735
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 602
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9235
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4265
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1045
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11848
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1194
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15082
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18344
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17232
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4025
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6233
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.7821499857428e-5
allele num: 56112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14864
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

MQ
type: SiteQuality
SIO_000300: 4.563e1

DP
type: SiteQuality
SIO_000300: 1.408584e6

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.854e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.41e-1

Annotation
canonical: false
consequence: missense_variant
consequence: splice_region_variant
ensembl gene: ENSG00000140365
ensembl protein: ENSP00000340867
ensembl transcript: ENST00000338995
gene symbol: COMMD4
hgvsc: ENST00000338995.6:c.380G>A
hgvsp: ENSP00000340867.6:p.Arg127His
variant of: http://identifiers.org/hgnc/26027

GenotypeDepth
all individuals: 4249
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 409
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 152
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1045
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 902
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11738
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10229
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9416
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 734
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2092
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1002
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 318
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 498
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1194
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15434
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4090
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17608
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3580
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6233
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.790317960469779e-5
allele num: 55856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.953e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

VQSLOD
type: SiteQuality
SIO_000300: -2.541e0

MQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 4.278e1

DP
type: SiteQuality
SIO_000300: 1.399471e6

QD
type: SiteQuality
SIO_000300: 9.43e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000140365
ensembl transcript: ENST00000567023
gene symbol: COMMD4
hgvsc: ENST00000567023.1:n.870A>G
variant of: http://identifiers.org/hgnc/26027

GenotypeDepth
all individuals: 9871
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4596
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10890
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1044
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16605
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9163
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 318
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1949
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 734
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 995
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 589
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 152
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 902
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 409
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1194
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18500
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1376
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4452
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15401
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6233
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 899
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.144426642252232e-4
allele num: 8738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7020
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.481e0

DP
type: SiteQuality
SIO_000300: 1.370168e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.464e0

FS
type: SiteQuality
SIO_000300: 6.021e0

MQ
type: SiteQuality
SIO_000300: 3.537e1

QD
type: SiteQuality
SIO_000300: 1.241e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

GenotypeDepth
all individuals: 240
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 734
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 409
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 902
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22114
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1041
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4800
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6641
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11748
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5674
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 152
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 979
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1334
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1194
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 318
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5279
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6233
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 642
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6354
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.909563091964558e-5
allele num: 52368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14318
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

MQ
type: SiteQuality
SIO_000300: 5.13e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

DP
type: SiteQuality
SIO_000300: 1.238697e6

VQSLOD
type: SiteQuality
SIO_000300: -1.292e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.092e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

GenotypeDepth
all individuals: 22540
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 977
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 409
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1194
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1311
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1466
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1041
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4337
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6061
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 152
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 902
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12017
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5947
bin: 1.75e1
variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele num: 4548
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Other
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African
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East Asian
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European (Non-Finnish)
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MQRankSum
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MQ
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ClippingRankSum
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DP
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VQSLOD
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 1.555451858764971e-4
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Other
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South Asian
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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African
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allele frequency: 8.937691521961185e-4
allele num: 7832
num of homozygotes: 0

Latino
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East Asian
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South Asian
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European (Non-Finnish)
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allele frequency: 5.851375073142189e-5
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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Latino
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European (Finnish)
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East Asian
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Other
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VQSLOD
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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South Asian
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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allele frequency: 2.877173076143778e-3
allele num: 49354
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MQ
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SIO_000300: 5.03e1

MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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FS
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MQ
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DP
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MQRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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MQ
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QD
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MQRankSum
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FS
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DP
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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MQRankSum
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QD
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VQSLOD
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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QD
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BaseQRankSum
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MQRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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allele num: 63014
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Latino
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South Asian
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East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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FS
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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MQ
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FS
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VQSLOD
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DP
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 63190
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Latino
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African
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European (Finnish)
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Other
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East Asian
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South Asian
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQ
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BaseQRankSum
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VQSLOD
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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African
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Other
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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FS
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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Latino
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FS
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MQRankSum
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DP
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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FS
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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FS
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QD
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Latino
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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FS
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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African
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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SIO_000300: -9.52e-1

QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

Latino
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allele count: 3
allele frequency: 2.617801047120419e-4
allele num: 11460
num of homozygotes: 0

African
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allele num: 9830
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64582
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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DP
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SIO_000300: 1.505483e6

MQRankSum
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ClippingRankSum
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MQ
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.6e-3

BaseQRankSum
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SIO_000300: 5.72e-1

FS
type: SiteQuality
SIO_000300: 1.005e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.428e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.59846547314578e-4
allele num: 12512
num of homozygotes: 0

African
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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VQSLOD
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MQ
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MQRankSum
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DP
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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GenotypeDepth
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variant carriers: 22

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

East Asian
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allele count: 14
allele frequency: 1.747815230961298e-3
allele num: 8010
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European (Finnish)
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allele count: 22
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 32
allele frequency: 5.175481158013909e-4
allele num: 61830
num of homozygotes: 0

African
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allele frequency: 1.304347826086957e-3
allele num: 9200
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Latino
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allele frequency: 5.428881650380022e-4
allele num: 11052
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Other
type: Population
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allele frequency: 1.275510204081633e-3
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ClippingRankSum
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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allele num: 6444
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Other
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 4.4e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
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SIO_000300: -3.493e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -1.274e0

MQRankSum
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MQ
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QD
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 5.0e-4

BaseQRankSum
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SIO_000300: 1.7e-2

FS
type: SiteQuality
SIO_000300: 1.962e0

DP
type: SiteQuality
SIO_000300: 1.538584e6

VQSLOD
type: SiteQuality
SIO_000300: 2.68e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 10036
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

DP
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SIO_000300: 1.543522e6

ReadPosRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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QD
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SIO_000300: 1.249e1

VQSLOD
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SIO_000300: 7.13e-1

BaseQRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65512
num of homozygotes: 0

Latino
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African
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Other
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DP
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SIO_000300: 1.546614e6

InbreedingCoeff
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FS
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QD
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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African
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European (Finnish)
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FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele num: 11520
num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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African
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East Asian
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South Asian
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ReadPosRankSum
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QD
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BaseQRankSum
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VQSLOD
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FS
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DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 1.971608832807571e-4
allele num: 10144
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66068
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e-1

FS
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MQ
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MQRankSum
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SIO_000300: 4.1e-2

InbreedingCoeff
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SIO_000300: -4.0e-4

DP
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SIO_000300: 1.572894e6

VQSLOD
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BaseQRankSum
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SIO_000300: -2.164e0

QD
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ClippingRankSum
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SIO_000300: -5.44e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 1.667677380230443e-3
allele num: 6596
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.209811571847685e-4
allele num: 66126
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

InbreedingCoeff
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SIO_000300: 2.0e-4

BaseQRankSum
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SIO_000300: -8.799999999999999e-2

MQRankSum
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SIO_000300: 1.28e-1

FS
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ClippingRankSum
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SIO_000300: -5.580000000000001e-1

QD
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SIO_000300: 1.257e1

DP
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SIO_000300: 1.577053e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
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SIO_000300: 4.53e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66264
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

DP
type: SiteQuality
SIO_000300: 1.582278e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 2.55e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
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SIO_000300: -5.511e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.895111814763506e-5
allele num: 10106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.517220452131695e-5
allele num: 65910
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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QD
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BaseQRankSum
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FS
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SIO_000300: 2.283e0

ClippingRankSum
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SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.552904753232562e-5
allele num: 65892
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 4.716e0

MQ
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DP
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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SIO_000300: 3.19e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.512538947877908e-5
allele num: 66114
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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FS
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MQRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.101653548111538e-5
allele num: 65556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
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SIO_000300: 1.08e0

VQSLOD
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FS
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SIO_000300: 1.58567e2

BaseQRankSum
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SIO_000300: -1.517e0

DP
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SIO_000300: 1.581626e6

MQRankSum
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SIO_000300: -3.58e-1

QD
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MQ
type: SiteQuality
SIO_000300: 5.177e1

ReadPosRankSum
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SIO_000300: -3.58e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.03702128951924e-5
allele num: 65854
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.877518767285657e-5
allele num: 10124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.01865e2

MQ
type: SiteQuality
SIO_000300: 5.177e1

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-1

DP
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SIO_000300: 1.570706e6

QD
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InbreedingCoeff
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SIO_000300: 1.01e-2

ClippingRankSum
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SIO_000300: 1.5e0

BaseQRankSum
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SIO_000300: -1.754e0

ReadPosRankSum
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SIO_000300: -1.815e0

VQSLOD
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SIO_000300: -5.178e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
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allele count: 7
allele frequency: 4.306632213608958e-4
allele num: 16254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-5
allele num: 66100
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 5.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.142e1

DP
type: SiteQuality
SIO_000300: 1.572825e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.365e0

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 18

Other
type: Population
allele count: 4
allele frequency: 4.454342984409799e-3
allele num: 898
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.551501238446202e-5
allele num: 66212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 10
allele frequency: 6.151574803149606e-4
allele num: 16256
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
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SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 1.579382e6

BaseQRankSum
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SIO_000300: -1.262e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

FS
type: SiteQuality
SIO_000300: 1.115e0

MQRankSum
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SIO_000300: 2.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.23e-2

QD
type: SiteQuality
SIO_000300: 1.094e1

VQSLOD
type: SiteQuality
SIO_000300: 2.89e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509160604871571e-5
allele num: 66262
num of homozygotes: 0

African
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allele count: 0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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num of homozygotes: 0

Other
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MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

DP
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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SIO_000300: 5.0e-4

ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.153088850603002e-5
allele num: 16252
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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variant carriers: 5

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43595
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 45
allele frequency: 6.775679826542596e-4
allele num: 66414
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

QD
type: SiteQuality
SIO_000300: 1.097e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.64e-1

FS
type: SiteQuality
SIO_000300: 1.114e0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

DP
type: SiteQuality
SIO_000300: 1.587999e6

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

GenotypeDepth
all individuals: 1532
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7532
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 53
bin: 6.75e1
variant carriers: 4

GenotypeDepth
all individuals: 34
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 79
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 226
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7636
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variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1934
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 440
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.387604070305273e-3
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

DP
type: SiteQuality
SIO_000300: 1.58841e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.351e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.33e-1

GenotypeDepth
all individuals: 1538
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 702
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variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7660
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43196
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 487
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66500
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.658103148541626e-5
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16238
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.244e1

MQ
type: SiteQuality
SIO_000300: 5.929e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e-1

FS
type: SiteQuality
SIO_000300: 1.792e0

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.587764e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

GenotypeDepth
all individuals: 257
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1538
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 589
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25143
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 488
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7654
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1