11-117695362-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695362
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695362
    reference: chr 11
allele count: 2
allele frequency: 1.672828250723498e-5
allele num: 119558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.87+7G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1930G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.91+7G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.98G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1930G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.25+7G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1930G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1930G>A
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10150
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
hgvs: c.25+7G>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS

11-117695372-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695372
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695372
    reference: chr 11
allele count: 3
allele frequency: 2.512604901254627e-5
allele num: 119398
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.22G>A
  hgvsp: ENSP00000292079.2:p.Gly8Ser
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1940G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.88G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1940G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.84G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1940G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1940G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.88G>A
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15931
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20871
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5575
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly8Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

11-117695373-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695373
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695373
    reference: chr 11
allele count: 5
allele frequency: 4.187815133088765e-5
allele num: 119394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.87C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.21C>T
  hgvsp: ENST00000292079.2:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1941C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1941C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.83C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1941C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1941C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.87C>T
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15959
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5575
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp7Asp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

11-117695380-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695380
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695380
    reference: chr 11
allele count: 1
allele frequency: 8.387713677005921e-6
allele num: 119222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1948C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.14C>T
  hgvsp: ENSP00000292079.2:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.76C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1948C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.80C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.80C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1948C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1948C>T
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15623
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10145
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6906
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser5Leu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

11-117695396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695396
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695396
    reference: chr 11
allele count: 2
allele frequency: 1.685857342751656e-5
allele num: 118634
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.64G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.64G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1964G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1964G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1964G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.60G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1964G>A
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20449
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10141
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3187
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS

11-117695401-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695401
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695401
    reference: chr 11
allele count: 16
allele frequency: 1.352356481168436e-4
allele num: 118312
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1969C>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.55C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-8C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.59C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1969C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.59C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1969C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1969C>G
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19890
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4508
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13016
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3813
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-117695402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695402
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695402
    reference: chr 11
allele count: 3
allele frequency: 2.537212449255751e-5
allele num: 118240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.58C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1970C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-9C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1970C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.58C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1970C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.54C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1970C>T
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29283
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

11-117695403-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695403
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695403
    reference: chr 11
allele count: 967
allele frequency: 8.193526520928656e-3
allele num: 118020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.57A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.57A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.53A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-10A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1971A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1971A>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1971A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1971A>G
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 3.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 9.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 12168
  bin: 2.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 19300
  bin: 2.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 1.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 3.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 1.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 10709
  bin: 9.75e1
  variant carriers: 900
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 37
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: T
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

11-117695404-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695404
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695404
    reference: chr 11
allele count: 1
allele frequency: 8.475294516484449e-6
allele num: 117990
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.52C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1972C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1972C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1972C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-11C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.56C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1972C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.56C>T
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6202
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-117695406-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695406
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695406
    reference: chr 11
allele count: 1
allele frequency: 8.478743789320174e-6
allele num: 117942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.54T>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.50T>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.54T>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-13T>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1974T>C
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1974T>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1974T>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1974T>C
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19150
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10052
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

11-117695408-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695408
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695408
    reference: chr 11
allele count: 9
allele frequency: 7.646299191191464e-5
allele num: 117704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1976C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.52C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.52C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-15C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.48C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1976C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1976C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1976C>T
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18662
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7315
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10058
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-117695411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695411
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695411
    reference: chr 11
allele count: 6
allele frequency: 5.108730820973043e-5
allele num: 117446
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-18G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1979G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.49G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.49G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.45G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1979G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1979G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1979G>A
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7108
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10807
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24669
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5321
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

11-117695415-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695415
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695415
    reference: chr 11
allele count: 5
allele frequency: 4.263301500682128e-5
allele num: 117280
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-22G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1983G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.45G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1983G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.45G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1983G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1983G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.41G>A
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10047
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

11-117695416-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695416
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695416
    reference: chr 11
allele count: 1
allele frequency: 8.528348229514908e-6
allele num: 117256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.44A>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1984A>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-23A>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.44A>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1984A>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1984A>C
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.40A>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1984A>C
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6680
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10043
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

11-117695420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695420
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695420
    reference: chr 11
allele count: 2
allele frequency: 1.708058620571858e-5
allele num: 117092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1988G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1988G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.40G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1988G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-27G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.36G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.40G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1988G>A
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15547
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2831
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2664
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

11-117695427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695427
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695427
    reference: chr 11
allele count: 61
allele frequency: 5.238839554097459e-4
allele num: 116438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-1995G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-34G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.33G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-1995G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.33G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.29G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-1995G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-1995G>A
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9737
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10099
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13238
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 6827
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18013
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

11-117695441-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695441
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695441
    reference: chr 11
allele count: 1
allele frequency: 8.762705923589205e-6
allele num: 114120
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-48A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-2009A>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.15A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-2009A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.19A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-2009A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.19A>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-2009A>G
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8182
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6454
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3145
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

11-117695442-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695442
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695442
    reference: chr 11
allele count: 1
allele frequency: 8.806848205164336e-6
allele num: 113548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.14C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-49C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-2010C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-2010C>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.18C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-2010C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.18C>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-2010C>G
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11280
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3349
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6179
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

11-117695443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117695443
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117695443
    reference: chr 11
allele count: 1
allele frequency: 8.807623879229862e-6
allele num: 113538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000534383
  gene symbol: FXYD2
  hgvsc: ENST00000534383.1:n.17G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.20-2011G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000533281
  gene symbol: FXYD2
  hgvsc: ENST00000533281.1:n.13G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137731
  ensembl transcript: ENST00000317594
  gene symbol: FXYD2
  hgvsc: ENST00000317594.6:n.17G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000292079
  ensembl transcript: ENST00000292079
  gene symbol: FXYD2
  hgvsc: ENST00000292079.2:c.-50G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-2011G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.20-2011G>A
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.20-2011G>A
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13961
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10031
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3734
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6180
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-117698690-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117698690
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117698690
    reference: chr 11
allele count: 1
allele frequency: 4.769172071728348e-5
allele num: 20968
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-5258T>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.19+20T>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.19+20T>G
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.19+20T>G
  variant of: http://identifiers.org/hgnc/4026
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9392
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6313
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

11-117698722-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117698722
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117698722
    reference: chr 11
allele count: 1
allele frequency: 4.767807761991036e-5
allele num: 20974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.7A>G
  hgvsp: ENSP00000432430.1:p.Arg3Gly
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.7A>G
  hgvsp: ENSP00000260287.2:p.Arg3Gly
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.7A>G
  hgvsp: ENSP00000436414.1:p.Arg3Gly
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-5290A>G
  variant of: http://identifiers.org/hgnc/39978
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9391
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6479
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg3Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

11-117698753-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117698753
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117698753
    reference: chr 11
allele count: 1
allele frequency: 4.768717215069146e-5
allele num: 20970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.-25C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-5321C>T
  variant of: http://identifiers.org/hgnc/39978
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6068
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9386
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4807
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

11-117698762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117698762
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117698762
    reference: chr 11
allele count: 5925
allele frequency: 2.824926098979689e-1
allele num: 20974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.-34C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-5330C>T
  variant of: http://identifiers.org/hgnc/39978
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 3.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 9.75e1
  variant carriers: 2341
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.75e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.25e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.25e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 2.5e0
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.75e1
  variant carriers: 232
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.25e1
  variant carriers: 219
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 6.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9844
  bin: 9.75e1
  variant carriers: 4970
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 7.5e0
  variant carriers: 234
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 6.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
  variant carriers: 24
num of homozygotes: 907
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

11-117698767-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117698767
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117698767
    reference: chr 11
allele count: 1
allele frequency: 4.76598989610142e-5
allele num: 20982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.-39G>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.-39G>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.-39G>C
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-5335G>C
  variant of: http://identifiers.org/hgnc/39978
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4385
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9277
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

11-117698773-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117698773
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117698773
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 20980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000436414
  ensembl transcript: ENST00000532119
  gene symbol: FXYD2
  hgvsc: ENST00000532119.1:c.-45C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.273-5341C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000260287
  ensembl transcript: ENST00000260287
  gene symbol: FXYD2
  hgvsc: ENST00000260287.2:c.-45C>T
  variant of: http://identifiers.org/hgnc/4026
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000137731
  ensembl protein: ENSP00000432430
  ensembl transcript: ENST00000528014
  gene symbol: FXYD2
  hgvsc: ENST00000528014.1:c.-45C>T
  variant of: http://identifiers.org/hgnc/4026
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6358
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9275
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

11-117704539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117704539
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117704539
    reference: chr 11
allele count: 1
allele frequency: 2.338634237605239e-4
allele num: 4276
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+5957C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.100+6G>A
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3209
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3514
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: n.100+6G>A
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 3.270111183780249e-4
  allele num: 3058
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

11-117706942-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117706942
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117706942
    reference: chr 11
allele count: 5
allele frequency: 3.571428571428572e-1
allele num: 14
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.153-42C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3554G>C
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.170-42C>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.101-42C>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 2.5e0
  variant carriers: 223
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3257
  bin: 7.5e0
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.25e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 1.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 6.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-117707033-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707033
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707033
    reference: chr 11
allele count: 182
allele frequency: 1.226415094339623e-1
allele num: 1484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.219C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.202C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.150C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3463G>A
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 7.5e0
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 9.75e1
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 2.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 8.75e1
  variant carriers: 23
num of homozygotes: 8
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

11-117707056-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707056
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707056
    reference: chr 11
allele count: 1
allele frequency: 4.035512510088781e-4
allele num: 2478
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3440G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.242C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.225C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.173C>T
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-117707059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707059
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707059
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 2608
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.176G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3437C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.228G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.245G>A
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum

11-117707060-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707060
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707060
    reference: chr 11
allele count: 1
allele frequency: 3.802281368821293e-4
allele num: 2630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.246G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3436C>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.177G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.229G>T
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3257
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

11-117707074-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707074
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707074
    reference: chr 11
allele count: 1
allele frequency: 3.035822707953856e-4
allele num: 3294
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3422G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.260C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.243C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.191C>T
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

11-117707089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707089
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707089
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 4916
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3407G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.258C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.275C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.206C>T
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2995
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

11-117707107-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707107
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707107
    reference: chr 11
allele count: 2
allele frequency: 3.466204506065858e-4
allele num: 5770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.276G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.224G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3389C>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.293G>C
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

11-117707149-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707149
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707149
    reference: chr 11
allele count: 1
allele frequency: 1.940240589833139e-4
allele num: 5154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.335C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.266C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.318C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3347G>A
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/11-117707152-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707152
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707152
    reference: chr 11
allele count: 1
allele frequency: 2.049180327868852e-4
allele num: 4880
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.269C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.321C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3344G>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.338C>A
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

11-117707152-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707152
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707152
    reference: chr 11
allele count: 1
allele frequency: 2.049180327868852e-4
allele num: 4880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.321C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.338C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.269C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3344G>A
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/11-117707161-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707161
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707161
    reference: chr 11
allele count: 1
allele frequency: 2.405002405002405e-4
allele num: 4158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.347A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.330A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.278A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3335T>G
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

11-117707167-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707167
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707167
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 3650
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.284T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3329A>C
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.353T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.336T>G
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3011
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3012
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

11-117707174-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707174
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707174
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 3232
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.343A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.291A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.360A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3322T>C
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3274
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-117707191-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707191
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707191
    reference: chr 11
allele count: 1259
allele frequency: 6.483007209062822e-1
allele num: 1942
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.308T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.377T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.360T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3305A>G
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.25e1
  variant carriers: 777
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 2.5e0
  variant carriers: 759
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3090
  bin: 7.5e0
  variant carriers: 2208
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 6.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 117
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 1.75e1
  variant carriers: 539
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 7.5e0
  variant carriers: 411
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 221
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.75e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 2.25e1
  variant carriers: 556
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 1.25e1
  variant carriers: 288
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.75e1
  variant carriers: 177
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 9.25e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 9.75e1
  variant carriers: 616
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.75e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 6.25e1
  variant carriers: 46
num of homozygotes: 365
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-117707206-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707206
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707206
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 414
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.323C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.375C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.392C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3290G>T
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5262
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

11-117707229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707229
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707229
    reference: chr 11
allele count: 29
allele frequency: 1.883116883116883e-1
allele num: 154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.403+12C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.386+12C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.334+12C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3267G>A
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 2.5e0
  variant carriers: 270
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.5e0
  variant carriers: 401
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 6.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 1.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 1.25e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 3874
  bin: 7.5e0
  variant carriers: 112
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 9.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.75e1
  variant carriers: 8
num of homozygotes: 2
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

11-117707243-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117707243
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117707243
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 80
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000525260
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000525260.1:n.403+26T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.386+26T>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000534150
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000534150.1:n.334+26T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+3253A>G
  variant of: http://identifiers.org/hgnc/39978
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4666
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

11-117708906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117708906
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117708906
    reference: chr 11
allele count: 2
allele frequency: 1.850823616509347e-4
allele num: 10806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*108C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*108C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1590C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.*32C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.*73C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*108C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*108C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-416G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.493C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*108C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*108C>T
  variant of: http://identifiers.org/hgnc/4030
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-117708921-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117708921
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117708921
    reference: chr 11
allele count: 1
allele frequency: 9.267840593141798e-5
allele num: 10790
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*93A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*93A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*93A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.*58A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-401T>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*93A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.*17A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*93A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1575A>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.478A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*93A>G
  variant of: http://identifiers.org/hgnc/4030
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

11-117708924-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117708924
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117708924
    reference: chr 11
allele count: 1
allele frequency: 9.267840593141798e-5
allele num: 10790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*90T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1572T>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*90T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.475T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.*14T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*90T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*90T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*90T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-398A>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.*55T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.553T>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*90T>A
  variant of: http://identifiers.org/hgnc/4030
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

11-117708951-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117708951
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117708951
    reference: chr 11
allele count: 1
allele frequency: 9.274717121127805e-5
allele num: 10782
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.526A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.448A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*63A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.*28A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*63A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1545A>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*63A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.323A>G
  hgvsp: ENSP00000436629.2:p.Asn108Ser
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*160A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-371T>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*63A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*63A>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*63A>G
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn108Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

11-117708953-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117708953
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117708953
    reference: chr 11
allele count: 1
allele frequency: 9.278159213212098e-5
allele num: 10778
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*61A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1543A>C
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*61A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*61A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*61A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*61A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.*26A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.446A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*61A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.524A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*158A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.321A>C
  hgvsp: ENST00000529335.2:c.321A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-369T>G
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala107Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/11-117708988-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117708988
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117708988
    reference: chr 11
allele count: 2
allele frequency: 1.857010213556174e-4
allele num: 10770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*26T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.489T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*26T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*26T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*26T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.264T>G
  hgvsp: ENST00000584394.1:c.264T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-334A>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*123T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*26T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.286T>G
  hgvsp: ENSP00000436629.2:p.Trp96Gly
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*26T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.411T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1508T>G
  variant of: http://identifiers.org/hgnc/39978
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp96Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

11-117709006-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117709006
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117709006
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 10770
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*22-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.485-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*22-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*22-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*22-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.407-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*22-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*22-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-316T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.260-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.282-14A>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1490A>C
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*119-14A>C
  variant of: http://identifiers.org/hgnc/4030
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ

11-117709028-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117709028
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117709028
    reference: chr 11
allele count: 9340
allele frequency: 8.669018006311491e-1
allele num: 10774
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*22-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.407-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-294G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.485-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.260-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*22-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.282-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*22-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*22-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*22-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*119-36C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1468C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*22-36C>T
  variant of: http://identifiers.org/hgnc/4030
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.75e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.25e1
  variant carriers: 652
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 2.5e0
  variant carriers: 600
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 6.75e1
  variant carriers: 646
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 276
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 381
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.75e1
  variant carriers: 421
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 168
genotype quality: GenotypeQuality
num of homozygotes: 4065
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

11-117709038-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117709038
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117709038
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 10772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*119-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*22-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*22-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*22-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000254528
  ensembl transcript: ENST00000581173
  gene symbol: RP11-728F11.4
  hgvsc: ENST00000581173.2:n.387-284G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.260-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*22-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1458C>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.485-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.282-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.407-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*22-46C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*22-46C>A
  variant of: http://identifiers.org/hgnc/4030
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ

11-117710448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710448
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710448
    reference: chr 11
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*69C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*572C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+48C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+48C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+48C>T
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5072
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/11-117710449-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710449
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710448
    reference: chr 11
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*570delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+46delT
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*67delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+46delT
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+46delT
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: CA
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-117710451-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710451
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710451
    reference: chr 11
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*66C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*569C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+45C>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+45C>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+45C>G
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5072
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

11-117710451-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710451
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710451
    reference: chr 11
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*569C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+45C>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*66C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+45C>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+45C>A
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8850
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-117710453-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710453
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710453
    reference: chr 11
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*567G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+43G>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*64G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+43G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+43G>T
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8850
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ

11-117710453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710453
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710453
    reference: chr 11
allele count: 4
allele frequency: 3.299404457495422e-5
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*567G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*64G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+43G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+43G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+43G>A
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5380
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-117710454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710454
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710454
    reference: chr 11
allele count: 9
allele frequency: 7.421333861072631e-5
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*566C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*63C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+42C>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+42C>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+42C>T
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8850
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

11-117710463-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710463
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710463
    reference: chr 11
allele count: 133
allele frequency: 1.096581633494385e-3
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*54T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*557T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+33T>C
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+33T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+33T>C
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 2
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

11-117710465-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710465
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710465
    reference: chr 11
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+31G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*555G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*52G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+31G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+31G>A
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/11-117710471-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710471
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710471
    reference: chr 11
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*549G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*46G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+25G>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+25G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+25G>T
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP

11-117710474-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710474
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710474
    reference: chr 11
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*546T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+22T>C
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*43T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+22T>C
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+22T>C
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-117710478-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710478
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710478
    reference: chr 11
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*39T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+18T>G
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*542T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+18T>G
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+18T>G
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8840
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-117710481-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710481
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710481
    reference: chr 11
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+15G>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*539G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*36G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+15G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+15G>T
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/11-117710483-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710483
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710483
    reference: chr 11
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*34G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*537G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+13G>T
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+13G>T
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+13G>T
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

11-117710483-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710483
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710483
    reference: chr 11
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*537G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+13G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+13G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+13G>A
  variant of: http://identifiers.org/hgnc/4030
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-117710495-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710495
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710495
    reference: chr 11
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.484+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*118+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*21+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.281+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.259+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*21+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*21+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*21+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*22G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*21+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*21+1G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*525G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.272+1G>A
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.406+1G>A
  variant of: http://identifiers.org/hgnc/4030
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5550
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*21+1G>A
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP

11-117710503-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 117710503
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 117710503
    reference: chr 11
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000433312
  ensembl transcript: ENST00000526014
  gene symbol: FXYD6
  hgvsc: ENST00000526014.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000442756
  ensembl transcript: ENST00000539526
  gene symbol: FXYD6
  hgvsc: ENST00000539526.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000579486
  gene symbol: FXYD6
  hgvsc: ENST00000579486.1:n.525G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431427
  ensembl transcript: ENST00000524656
  gene symbol: FXYD6
  hgvsc: ENST00000524656.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000255245
  ensembl protein: ENSP00000463024
  ensembl transcript: ENST00000532984
  gene symbol: FXYD6-FXYD2
  hgvsc: ENST00000532984.1:c.265G>A
  hgvsp: ENSP00000463024.1:p.Gly89Ser
  variant of: http://identifiers.org/hgnc/39978
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463158
  ensembl transcript: ENST00000530956
  gene symbol: FXYD6
  hgvsc: ENST00000530956.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000436629
  ensembl transcript: ENST00000529335
  gene symbol: FXYD6
  hgvsc: ENST00000529335.2:c.274G>A
  hgvsp: ENSP00000436629.2:p.Gly92Ser
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000463160
  ensembl transcript: ENST00000584394
  gene symbol: FXYD6
  hgvsc: ENST00000584394.1:c.252G>A
  hgvsp: ENST00000584394.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431913
  ensembl transcript: ENST00000524841
  gene symbol: FXYD6
  hgvsc: ENST00000524841.1:c.*111G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000431446
  ensembl transcript: ENST00000527717
  gene symbol: FXYD6
  hgvsc: ENST00000527717.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000260282
  ensembl transcript: ENST00000260282
  gene symbol: FXYD6
  hgvsc: ENST00000260282.4:c.*14G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583660
  gene symbol: FXYD6
  hgvsc: ENST00000583660.1:n.477G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000464057
  ensembl transcript: ENST00000527429
  gene symbol: FXYD6
  hgvsc: ENST00000527429.1:c.*517G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000137726
  ensembl transcript: ENST00000583233
  gene symbol: FXYD6
  hgvsc: ENST00000583233.1:n.399G>A
  variant of: http://identifiers.org/hgnc/4030
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000137726
  ensembl protein: ENSP00000444243
  ensembl transcript: ENST00000540359
  gene symbol: FXYD6
  hgvsc: ENST00000540359.1:c.*14G>A
  variant of: http://identifiers.org/hgnc/4030
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4275
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly89Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

11-117710515-C-T
type: Variant
allele count: 7
allele frequency: 5.766252594813668e-5
allele num: 121396
alternate allele: T
canonical: true
consequence: missense
filter: PASS
hgvs: p.Val85Met
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 522
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32833
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7159
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.140997297961189e-5
allele num: 16284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.141552511415525e-3
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65734
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.684e0

VQSLOD
type: SiteQuality
SIO_000300: 4.68e-1

DP
type: SiteQuality
SIO_000300: 2.365743e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.839e0

GenotypeQuality
all individuals: 396
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7038
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10150
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 460
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522997258604934e-5
allele num: 65660
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.154603643525357e-5
allele num: 16248
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.813542688910697e-5
allele num: 10190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.111e1

DP
type: SiteQuality
SIO_000300: 2.36579e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.29e-1

FS
type: SiteQuality
SIO_000300: 4.82e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.95e-1

GenotypeQuality
all individuals: 346
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10151
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 7029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.568017784815909e-5
allele num: 65674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.15839389087326e-5
allele num: 16238
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.817396426467701e-5
allele num: 10186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.411e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.53e-1

QD
type: SiteQuality
SIO_000300: 1.327e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

FS
type: SiteQuality
SIO_000300: 1.115e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

DP
type: SiteQuality
SIO_000300: 2.366317e6

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32737
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524622655892666e-5
allele num: 65590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.94e-1

FS
type: SiteQuality
SIO_000300: 2.168e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

DP
type: SiteQuality
SIO_000300: 2.361831e6

QD
type: SiteQuality
SIO_000300: 1.003e1

GenotypeQuality
all individuals: 371
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1071
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
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GenotypeQuality
all individuals: 31036
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6607
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1864
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1857
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171508903467666e-4
allele num: 8536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65296
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.222000995520159e-5
allele num: 16072
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.245e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.301e0

DP
type: SiteQuality
SIO_000300: 2.337719e6

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.225e1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 1.325e0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29653
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10148
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 392
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6432
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
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variant carriers: 0

GenotypeQuality
all individuals: 1820
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.535060788407221e-4
allele num: 65144
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16000
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.517766497461929e-4
allele num: 6304
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.374e0

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

DP
type: SiteQuality
SIO_000300: 2.31812e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

QD
type: SiteQuality
SIO_000300: 1.215e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.977e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 863
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variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6404
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variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.5e0
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GenotypeQuality
all individuals: 1398
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
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variant carriers: 0

GenotypeQuality
all individuals: 10137
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 337
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15980
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.793527963418924e-5
allele num: 11372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.072102239562532e-5
allele num: 65102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.134e1

FS
type: SiteQuality
SIO_000300: 9.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-1

DP
type: SiteQuality
SIO_000300: 2.313229e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.331e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 424
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1860
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6176
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 418
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 27615
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 341
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variant carriers: 3

GenotypeQuality
all individuals: 984
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1541
bin: 2.75e1
variant carriers: 2

South Asian
type: Population
allele count: 4
allele frequency: 2.509095471082675e-4
allele num: 15942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.912442396313364e-3
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.230807101756977e-4
allele num: 64998
num of homozygotes: 0

Latino
type: Population
allele count: 51
allele frequency: 4.490227152667723e-3
allele num: 11358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

African
type: Population
allele count: 898
allele frequency: 8.908730158730159e-2
allele num: 10080
num of homozygotes: 37

FS
type: SiteQuality
SIO_000300: 5.34e-1

QD
type: SiteQuality
SIO_000300: 1.362e1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.02e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

DP
type: SiteQuality
SIO_000300: 2.312646e6

GenotypeQuality
all individuals: 362
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 4333
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variant carriers: 0

GenotypeQuality
all individuals: 486
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GenotypeQuality
all individuals: 1571
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variant carriers: 0

GenotypeQuality
all individuals: 10052
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 421
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GenotypeQuality
all individuals: 1711
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variant carriers: 0

GenotypeQuality
all individuals: 982
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variant carriers: 0

GenotypeQuality
all individuals: 28218
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10062
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538650910881339e-5
allele num: 64992
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

FS
type: SiteQuality
SIO_000300: 1.0991e1

MQ
type: SiteQuality
SIO_000300: 5.829e1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

DP
type: SiteQuality
SIO_000300: 2.296952e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 1.462e1

VQSLOD
type: SiteQuality
SIO_000300: -1.426e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 1758
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2055
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variant carriers: 0

GenotypeQuality
all individuals: 422
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variant carriers: 0

GenotypeQuality
all individuals: 1709
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variant carriers: 0

GenotypeQuality
all individuals: 435
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variant carriers: 0

GenotypeQuality
all individuals: 485
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variant carriers: 0

GenotypeQuality
all individuals: 6185
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variant carriers: 0

GenotypeQuality
all individuals: 983
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variant carriers: 0

GenotypeQuality
all individuals: 498
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variant carriers: 0

GenotypeQuality
all individuals: 239
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variant carriers: 0

GenotypeQuality
all individuals: 27959
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53955106690889e-5
allele num: 64954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.72e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.585e0

MQRankSum
type: SiteQuality
SIO_000300: -1.438e0

VQSLOD
type: SiteQuality
SIO_000300: -2.139e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 6.5e0

DP
type: SiteQuality
SIO_000300: 2.289409e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26654
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
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GenotypeQuality
all individuals: 633
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variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4830
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
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variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15906
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.942110836569008e-4
allele num: 11332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64824
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.539e0

QD
type: SiteQuality
SIO_000300: 3.077e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

FS
type: SiteQuality
SIO_000300: 6.947e0

DP
type: SiteQuality
SIO_000300: 2.277226e6

MQRankSum
type: SiteQuality
SIO_000300: -5.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.783e0

GenotypeQuality
all individuals: 684
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5873
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1671
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10052
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
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variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.636928498562552e-5
allele num: 64698
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.997601918465228e-4
allele num: 10008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.245e0

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.97e-1

QD
type: SiteQuality
SIO_000300: 8.380000000000001e0

DP
type: SiteQuality
SIO_000300: 2.255356e6

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.418522446094026e-4
allele num: 11316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

DP
type: SiteQuality
SIO_000300: 2.225235e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
SIO_000300: 1.047e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.275e0

VQSLOD
type: SiteQuality
SIO_000300: 8.53e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548419064135518e-5
allele num: 64582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15824
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 5.228e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

QD
type: SiteQuality
SIO_000300: 7.25e0

VQSLOD
type: SiteQuality
SIO_000300: -8.487e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

DP
type: SiteQuality
SIO_000300: 2.224131e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.003210272873194e-4
allele num: 9968
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549810923067386e-5
allele num: 64524
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.126e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 1.056e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 2.201455e6

GenotypeQuality
all individuals: 1282
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 60

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 61
allele frequency: 9.504814734021004e-4
allele num: 64178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

QD
type: SiteQuality
SIO_000300: 1.296e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

DP
type: SiteQuality
SIO_000300: 2.151372e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.949e0

VQSLOD
type: SiteQuality
SIO_000300: 5.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 444
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.589724023909449e-5
allele num: 62904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11080
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15394
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.322e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

DP
type: SiteQuality
SIO_000300: 2.063328e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.349e0

VQSLOD
type: SiteQuality
SIO_000300: 5.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5990
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.067827348567283e-5
allele num: 11028
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62582
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e-1

FS
type: SiteQuality
SIO_000300: 2.006e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.059199e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

QD
type: SiteQuality
SIO_000300: 1.102e1

VQSLOD
type: SiteQuality
SIO_000300: 8.73e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598056762976221e-5
allele num: 62576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5990
num of homozygotes: 0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.058636e6

FS
type: SiteQuality
SIO_000300: 5.136e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.18e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 1
allele frequency: 3.55366027007818e-4
allele num: 2814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.41e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 135
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GenotypeQuality
all individuals: 182
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.118067978533095e-4
allele num: 8944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.14e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.299e0

VQSLOD
type: SiteQuality
SIO_000300: -2.165e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 194
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GenotypeQuality
all individuals: 71
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.118568232662192e-4
allele num: 8940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2818
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.52e-1

FS
type: SiteQuality
SIO_000300: 1.138e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.49e-2

DP
type: SiteQuality
SIO_000300: 8.2173e5

QD
type: SiteQuality
SIO_000300: 1.024e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.176e0

VQSLOD
type: SiteQuality
SIO_000300: -9.137999999999999e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 16

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 13

European (Finnish)
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allele count: 15
allele frequency: 3.571428571428572e-1
allele num: 42
num of homozygotes: 2

East Asian
type: Population
allele count: 200
allele frequency: 3.076923076923077e-1
allele num: 650
num of homozygotes: 30

South Asian
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allele count: 1687
allele frequency: 2.131665403083144e-1
allele num: 7914
num of homozygotes: 195

Latino
type: Population
allele count: 148
allele frequency: 3.592233009708738e-1
allele num: 412
num of homozygotes: 21

Other
type: Population
allele count: 60
allele frequency: 3.03030303030303e-1
allele num: 198
num of homozygotes: 12

African
type: Population
allele count: 633
allele frequency: 2.246273953158268e-1
allele num: 2818
num of homozygotes: 65

European (Non-Finnish)
type: Population
allele count: 3182
allele frequency: 3.559284116331096e-1
allele num: 8940
num of homozygotes: 582

VQSLOD
type: SiteQuality
SIO_000300: 4.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

FS
type: SiteQuality
SIO_000300: 6.26e-1

QD
type: SiteQuality
SIO_000300: 1.694e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.139e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.019999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

DP
type: SiteQuality
SIO_000300: 9.19212e5

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.75e1
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GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2820
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East Asian
type: Population
allele count: 1
allele frequency: 1.538461538461538e-3
allele num: 650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8944
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 44
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
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DP
type: SiteQuality
SIO_000300: 8.29934e5

MQ
type: SiteQuality
SIO_000300: 5.883e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.063e0

FS
type: SiteQuality
SIO_000300: 4.783e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.327e0

QD
type: SiteQuality
SIO_000300: 1.402e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 9.25e1
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GenotypeQuality
all individuals: 185
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.109e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.77e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.153e0

VQSLOD
type: SiteQuality
SIO_000300: -2.674e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.559e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.333e0

QD
type: SiteQuality
SIO_000300: 4.66e0

DP
type: SiteQuality
SIO_000300: 8.30085e5

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 102
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.01e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.276e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.777e0

QD
type: SiteQuality
SIO_000300: 9.35e0

DP
type: SiteQuality
SIO_000300: 5.6416e4

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 6

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 3.0e-1
allele num: 10
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 1.5044e4

FS
type: SiteQuality
SIO_000300: 2.527e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.797e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.710000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 14
bin: 9.25e1
variant carriers: 14

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 13

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 2.5e-1
allele num: 16
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

South Asian
type: Population
allele count: 177
allele frequency: 1.64804469273743e-1
allele num: 1074
num of homozygotes: 7

Other
type: Population
allele count: 1
allele frequency: 5.555555555555555e-2
allele num: 18
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

FS
type: SiteQuality
SIO_000300: 1.892e0

DP
type: SiteQuality
SIO_000300: 4.4508e4

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.47e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

QD
type: SiteQuality
SIO_000300: 1.328e1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.555555555555555e-2
allele num: 18
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.098000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.77e-2

DP
type: SiteQuality
SIO_000300: 5.055e4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

QD
type: SiteQuality
SIO_000300: 1.138e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 20
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.68e-2

VQSLOD
type: SiteQuality
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QD
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DP
type: SiteQuality
SIO_000300: 5.1135e4

FS
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MQ
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 578
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Latino
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allele num: 20
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 48
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 30
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South Asian
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allele frequency: 5.417118093174431e-4
allele num: 1846
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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QD
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FS
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MQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

South Asian
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allele frequency: 4.409171075837742e-4
allele num: 2268
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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Other
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East Asian
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allele num: 116
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MQRankSum
type: SiteQuality
SIO_000300: 6.6e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.13e-2

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 102
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South Asian
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allele frequency: 0.0e0
allele num: 3376
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Latino
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allele frequency: 0.0e0
allele num: 38
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1220
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
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MQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.83e-2

ClippingRankSum
type: SiteQuality
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FS
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BaseQRankSum
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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South Asian
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allele frequency: 5.045408678102926e-4
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 46
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.8222e4

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 2.831257078142696e-4
allele num: 3532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1292
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Latino
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allele frequency: 0.0e0
allele num: 46
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East Asian
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allele frequency: 0.0e0
allele num: 118
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Other
type: Population
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allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.4913e4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.943e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.29e-2

QD
type: SiteQuality
SIO_000300: 9.84e0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.985074626865672e-4
allele num: 3350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1210
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

FS
type: SiteQuality
SIO_000300: 1.714e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.72e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

DP
type: SiteQuality
SIO_000300: 6.1203e4

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.85e0

VQSLOD
type: SiteQuality
SIO_000300: -3.128e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-2
allele num: 98
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1210
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.128e0

FS
type: SiteQuality
SIO_000300: 1.714e0

QD
type: SiteQuality
SIO_000300: 4.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.72e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

DP
type: SiteQuality
SIO_000300: 6.1203e4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.50385423966363e-4
allele num: 2854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1018
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.843e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.66e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.191e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: -2.079e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.4303e4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

QD
type: SiteQuality
SIO_000300: 9.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.006e-1

FS
type: SiteQuality
SIO_000300: 3.332e0

DP
type: SiteQuality
SIO_000300: 5.1127e4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 8.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.85e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
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MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.8e-2

DP
type: SiteQuality
SIO_000300: 4.8048e4

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.13e-2

FS
type: SiteQuality
SIO_000300: 6.304e0

QD
type: SiteQuality
SIO_000300: 1.334e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.56e-1

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 136

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 128

East Asian
type: Population
allele count: 71
allele frequency: 7.244897959183674e-1
allele num: 98
num of homozygotes: 23

Other
type: Population
allele count: 10
allele frequency: 6.25e-1
allele num: 16
num of homozygotes: 3

African
type: Population
allele count: 25
allele frequency: 6.25e-1
allele num: 40
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.0e0
allele num: 2
num of homozygotes: 1

South Asian
type: Population
allele count: 870
allele frequency: 6.682027649769585e-1
allele num: 1302
num of homozygotes: 262

Latino
type: Population
allele count: 9
allele frequency: 5.625e-1
allele num: 16
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 272
allele frequency: 5.811965811965812e-1
allele num: 468
num of homozygotes: 68

QD
type: SiteQuality
SIO_000300: 2.345e1

FS
type: SiteQuality
SIO_000300: 5.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.222e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 4.2944e4

VQSLOD
type: SiteQuality
SIO_000300: 8.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.907e4

QD
type: SiteQuality
SIO_000300: 3.126e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.340000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.63e-2

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 34

GenotypeQuality
all individuals: 345
bin: 2.25e1
variant carriers: 72

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.481481481481481e-1
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 2.142857142857143e-1
allele num: 70
num of homozygotes: 1

Latino
type: Population
allele count: 1
allele frequency: 2.5e-1
allele num: 4
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 2.5e-1
allele num: 20
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.486e4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.519999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 5.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
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allele count: 0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 2
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Other
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 2.664535038635758e-4
allele num: 7506
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 92
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Other
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 192
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2758
num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.262e0

QD
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SIO_000300: 1.202e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.18e-2

ClippingRankSum
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SIO_000300: -3.45e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.81e-2

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.478e1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 3.40605e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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African
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Other
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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VQSLOD
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FS
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QD
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DP
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Latino
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Other
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South Asian
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European (Finnish)
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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MQ
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DP
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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South Asian
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East Asian
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African
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European (Non-Finnish)
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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MQ
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MQRankSum
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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InbreedingCoeff
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QD
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VQSLOD
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DP
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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Latino
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African
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European (Finnish)
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East Asian
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MQ
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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QD
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InbreedingCoeff
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FS
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VQSLOD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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African
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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ReadPosRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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Other
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European (Finnish)
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InbreedingCoeff
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QD
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MQRankSum
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DP
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ReadPosRankSum
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FS
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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South Asian
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FS
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InbreedingCoeff
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DP
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QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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South Asian
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European (Non-Finnish)
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DP
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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DP
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MQ
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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QD
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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DP
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InbreedingCoeff
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FS
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MQ
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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South Asian
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Latino
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European (Non-Finnish)
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ReadPosRankSum
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QD
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VQSLOD
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FS
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DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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South Asian
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African
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Other
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East Asian
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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QD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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MQ
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

African
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South Asian
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Other
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Latino
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European (Finnish)
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East Asian
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QD
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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MQ
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DP
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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African
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South Asian
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DP
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QD
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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East Asian
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African
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European (Finnish)
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Latino
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South Asian
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MQ
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BaseQRankSum
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DP
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MQRankSum
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FS
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VQSLOD
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QD
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.712e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
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SIO_000300: 8.71e-1

InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 4.205485e6

ClippingRankSum
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SIO_000300: -3.4e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

BaseQRankSum
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SIO_000300: -1.156e0

QD
type: SiteQuality
SIO_000300: 1.347e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele num: 11578
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 1.712e0

MQRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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DP
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ClippingRankSum
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VQSLOD
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QD
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SIO_000300: 1.347e1

ReadPosRankSum
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SIO_000300: 9.8e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66704
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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South Asian
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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QD
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FS
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SIO_000300: 4.965e0

DP
type: SiteQuality
SIO_000300: 4.206036e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele num: 16510
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Other
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European (Non-Finnish)
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QD
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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