16-61891101-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891101
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891101
    reference: chr 16
allele count: 4
allele frequency: 3.309340613882684e-5
allele num: 120870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.589C>A
  hgvsp: ENSP00000462976.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.589C>A
  hgvsp: ENSP00000462018.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.589C>A
  hgvsp: ENSP00000462701.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.589C>A
  hgvsp: ENSP00000463511.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.589C>A
  hgvsp: ENSP00000463266.1:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.589C>A
  hgvsp: ENSP00000299345.6:p.Pro197Thr
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40973
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8617
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro197Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

16-61891108-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891108
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891108
    reference: chr 16
allele count: 7
allele frequency: 5.79671740174564e-5
allele num: 120758
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.582T>C
  hgvsp: ENST00000577390.1:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.582T>C
  hgvsp: ENST00000299345.6:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.582T>C
  hgvsp: ENST00000585315.1:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.582T>C
  hgvsp: ENST00000584337.1:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.582T>C
  hgvsp: ENST00000583382.1:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.582T>C
  hgvsp: ENST00000577730.1:c.582T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40894
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2007
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8574
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala194Ala
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

16-61891110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891110
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891110
    reference: chr 16
allele count: 2
allele frequency: 1.65694591728526e-5
allele num: 120704
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.580G>A
  hgvsp: ENSP00000462701.1:p.Ala194Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.580G>A
  hgvsp: ENSP00000463266.1:p.Ala194Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.580G>A
  hgvsp: ENSP00000462976.1:p.Ala194Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.580G>A
  hgvsp: ENSP00000462018.1:p.Ala194Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.580G>A
  hgvsp: ENSP00000299345.6:p.Ala194Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.580G>A
  hgvsp: ENSP00000463511.1:p.Ala194Thr
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8544
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala194Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-61891111-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891111
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891111
    reference: chr 16
allele count: 6
allele frequency: 4.975454424837468e-5
allele num: 120592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.579C>T
  hgvsp: ENST00000299345.6:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.579C>T
  hgvsp: ENST00000577730.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.579C>T
  hgvsp: ENST00000577390.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.579C>T
  hgvsp: ENST00000584337.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.579C>T
  hgvsp: ENST00000583382.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.579C>T
  hgvsp: ENST00000585315.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13004
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8512
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp193Asp
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

16-61891114-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891114
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891114
    reference: chr 16
allele count: 8
allele frequency: 6.637021304838388e-5
allele num: 120536
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.576C>T
  hgvsp: ENST00000577390.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.576C>T
  hgvsp: ENST00000584337.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.576C>T
  hgvsp: ENST00000577730.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.576C>T
  hgvsp: ENST00000583382.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.576C>T
  hgvsp: ENST00000585315.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.576C>T
  hgvsp: ENST00000299345.6:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1976
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr192Thr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

16-61891117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891117
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891117
    reference: chr 16
allele count: 44
allele frequency: 3.655395862756501e-4
allele num: 120370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.573G>A
  hgvsp: ENST00000299345.6:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.573G>A
  hgvsp: ENST00000585315.1:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.573G>A
  hgvsp: ENST00000577390.1:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.573G>A
  hgvsp: ENST00000584337.1:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.573G>A
  hgvsp: ENST00000577730.1:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.573G>A
  hgvsp: ENST00000583382.1:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 29919
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40731
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala191Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum

16-61891125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891125
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891125
    reference: chr 16
allele count: 5
allele frequency: 4.174946978173377e-5
allele num: 119762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.565G>A
  hgvsp: ENSP00000462018.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.565G>A
  hgvsp: ENSP00000299345.6:p.Val189Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.565G>A
  hgvsp: ENSP00000462701.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.565G>A
  hgvsp: ENSP00000462976.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.565G>A
  hgvsp: ENSP00000463266.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.565G>A
  hgvsp: ENSP00000463511.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29561
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40532
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1533
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8098
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val189Ile
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

16-61891126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891126
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891126
    reference: chr 16
allele count: 3
allele frequency: 2.511553144464537e-5
allele num: 119448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.564C>T
  hgvsp: ENST00000583382.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.564C>T
  hgvsp: ENST00000577730.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.564C>T
  hgvsp: ENST00000299345.6:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.564C>T
  hgvsp: ENST00000577390.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.564C>T
  hgvsp: ENST00000584337.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.564C>T
  hgvsp: ENST00000585315.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8047
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40169
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn188Asn
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

16-61891136-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891136
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891136
    reference: chr 16
allele count: 1
allele frequency: 8.484210883545722e-6
allele num: 117866
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.554C>G
  hgvsp: ENSP00000462018.1:p.Ser185Cys
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.554C>G
  hgvsp: ENSP00000463266.1:p.Ser185Cys
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.554C>G
  hgvsp: ENSP00000462976.1:p.Ser185Cys
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.554C>G
  hgvsp: ENSP00000463511.1:p.Ser185Cys
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.554C>G
  hgvsp: ENSP00000462701.1:p.Ser185Cys
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.554C>G
  hgvsp: ENSP00000299345.6:p.Ser185Cys
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3446
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7746
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser185Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

16-61891144-TAATAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891144
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891139
    reference: chr 16
allele count: 1
allele frequency: 8.690664488206768e-6
allele num: 115066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.548-7_548-3delTTATT
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.548-7_548-3delTTATT
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.548-7_548-3delTTATT
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.548-7_548-3delTTATT
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.548-7_548-3delTTATT
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.548-7_548-3delTTATT
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3096
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7190
  bin: 6.75e1
  variant carriers: 0
hgvs: c.548-7_548-3delTTATT
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: TAATAA
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP

16-62055030-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055030
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055030
    reference: chr 16
allele count: 1
allele frequency: 8.382791804982731e-6
allele num: 119292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+26T>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+26T>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+26T>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+26T>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+26T>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+26T>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+26T>A
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3727
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3020
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

16-61891146-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891146
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891146
    reference: chr 16
allele count: 1
allele frequency: 8.739425295392576e-6
allele num: 114424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.548-4T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.548-4T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.548-4T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.548-4T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.548-4T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.548-4T>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3096
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6950
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1219
  bin: 8.25e1
  variant carriers: 0
hgvs: c.548-4T>C
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

16-61891155-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891155
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891155
    reference: chr 16
allele count: 1
allele frequency: 9.025433672087943e-6
allele num: 110798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.548-13T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.548-13T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.548-13T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.548-13T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.548-13T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.548-13T>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9870
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28413
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

16-61891183-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891183
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891183
    reference: chr 16
allele count: 1
allele frequency: 9.684854824026188e-6
allele num: 103254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.548-41A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.548-41A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.548-41A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.548-41A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.548-41A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.548-41A>T
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6208
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10552
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

16-61891183-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891183
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891183
    reference: chr 16
allele count: 3
allele frequency: 2.905456447207856e-5
allele num: 103254
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.548-41A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.548-41A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.548-41A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.548-41A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.548-41A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.548-41A>G
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13779
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13931
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6208
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

16-61891183-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891183
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891183
    reference: chr 16
allele count: 1
allele frequency: 9.684854824026188e-6
allele num: 103254
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.548-41A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.548-41A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.548-41A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.548-41A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.548-41A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.548-41A>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/16-61891194-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61891194
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61891194
    reference: chr 16
allele count: 1
allele frequency: 1.000980961342115e-5
allele num: 99902
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.548-52G>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.548-52G>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.548-52G>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.548-52G>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.548-52G>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.548-52G>T
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4062
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7591
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4961
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3054
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3067
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6571
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3451
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

16-61935033-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935033
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935033
    reference: chr 16
allele count: 15
allele frequency: 1.290611233480176e-4
allele num: 116224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.547+50A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.547+50A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.547+50A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.547+50A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.547+50A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.547+50A>G
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14296
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4354
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

16-61935042-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935042
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935042
    reference: chr 16
allele count: 2
allele frequency: 1.718596937460257e-5
allele num: 116374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.547+41C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.564C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.547+41C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.547+41C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.547+41C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.547+41C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.547+41C>T
  variant of: http://identifiers.org/hgnc/1767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

16-61935043-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935043
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935043
    reference: chr 16
allele count: 1
allele frequency: 8.591065292096219e-6
allele num: 116400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.563T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.547+40T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.547+40T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.547+40T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.547+40T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.547+40T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.547+40T>C
  variant of: http://identifiers.org/hgnc/1767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

16-61935054-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935054
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935054
    reference: chr 16
allele count: 1
allele frequency: 8.562376915831835e-6
allele num: 116790
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.547+29A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.547+29A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.547+29A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.552A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.547+29A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.547+29A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.547+29A>T
  variant of: http://identifiers.org/hgnc/1767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14355
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4334
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37447
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

16-61935054-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935054
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935054
    reference: chr 16
allele count: 1
allele frequency: 8.562376915831835e-6
allele num: 116790
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.547+29A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.547+29A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.552A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.547+29A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.547+29A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.547+29A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.547+29A>G
  variant of: http://identifiers.org/hgnc/1767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4334
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

16-61935055-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935055
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935055
    reference: chr 16
allele count: 1
allele frequency: 8.56179044161715e-6
allele num: 116798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.547+28T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.547+28T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.547+28T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.547+28T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.547+28T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.551T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.547+28T>C
  variant of: http://identifiers.org/hgnc/1767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37491
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-61935059-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935059
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935059
    reference: chr 16
allele count: 19
allele frequency: 1.622766560759796e-4
allele num: 117084
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.547+24G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.547+24G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.547+24G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.547+24G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.547+24G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.547G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.547+24G>C
  variant of: http://identifiers.org/hgnc/1767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14361
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7611
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4338
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

16-61935067-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935067
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935067
    reference: chr 16
allele count: 1
allele frequency: 8.472996559963397e-6
allele num: 118022
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.547+16A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.547+16A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.547+16A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.547+16A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.547+16A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.539A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.547+16A>G
  variant of: http://identifiers.org/hgnc/1767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1659
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7648
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-61935085-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935085
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935085
    reference: chr 16
allele count: 1
allele frequency: 8.301924386072691e-6
allele num: 120454
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.545T>C
  hgvsp: ENSP00000462701.1:p.Leu182Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.545T>C
  hgvsp: ENSP00000463266.1:p.Leu182Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.521T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.545T>C
  hgvsp: ENSP00000299345.6:p.Leu182Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.545T>C
  hgvsp: ENSP00000462018.1:p.Leu182Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.545T>C
  hgvsp: ENSP00000463511.1:p.Leu182Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.545T>C
  hgvsp: ENSP00000462976.1:p.Leu182Ser
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu182Ser
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-61935086-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935086
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935086
    reference: chr 16
allele count: 1
allele frequency: 8.297102651754007e-6
allele num: 120524
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.520T>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.544T>A
  hgvsp: ENSP00000462701.1:p.Leu182Met
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.544T>A
  hgvsp: ENSP00000463511.1:p.Leu182Met
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.544T>A
  hgvsp: ENSP00000463266.1:p.Leu182Met
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.544T>A
  hgvsp: ENSP00000462976.1:p.Leu182Met
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.544T>A
  hgvsp: ENSP00000299345.6:p.Leu182Met
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.544T>A
  hgvsp: ENSP00000462018.1:p.Leu182Met
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14470
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1878
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu182Met
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-61935091-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935091
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935091
    reference: chr 16
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.539C>A
  hgvsp: ENSP00000463266.1:p.Ser180Tyr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.539C>A
  hgvsp: ENSP00000462976.1:p.Ser180Tyr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.539C>A
  hgvsp: ENSP00000462701.1:p.Ser180Tyr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.539C>A
  hgvsp: ENSP00000299345.6:p.Ser180Tyr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.539C>A
  hgvsp: ENSP00000462018.1:p.Ser180Tyr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.539C>A
  hgvsp: ENSP00000463511.1:p.Ser180Tyr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.515C>A
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser180Tyr
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-61935099-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935099
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935099
    reference: chr 16
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.531A>G
  hgvsp: ENST00000577390.1:c.531A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.531A>G
  hgvsp: ENST00000577730.1:c.531A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.531A>G
  hgvsp: ENST00000299345.6:c.531A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.531A>G
  hgvsp: ENST00000583382.1:c.531A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.507A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.531A>G
  hgvsp: ENST00000584337.1:c.531A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.531A>G
  hgvsp: ENST00000585315.1:c.531A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41560
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro177Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/16-61935102-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935102
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935102
    reference: chr 16
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.528G>T
  hgvsp: ENST00000583382.1:c.528G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.528G>T
  hgvsp: ENST00000577390.1:c.528G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.528G>T
  hgvsp: ENST00000299345.6:c.528G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.528G>T
  hgvsp: ENST00000585315.1:c.528G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.528G>T
  hgvsp: ENST00000577730.1:c.528G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.528G>T
  hgvsp: ENST00000584337.1:c.528G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.504G>T
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7865
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41565
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val176Val
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

16-61935111-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935111
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935111
    reference: chr 16
allele count: 2
allele frequency: 1.649049323065253e-5
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.519T>C
  hgvsp: ENST00000585315.1:c.519T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.519T>C
  hgvsp: ENST00000577730.1:c.519T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.495T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.519T>C
  hgvsp: ENST00000584337.1:c.519T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.519T>C
  hgvsp: ENST00000299345.6:c.519T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.519T>C
  hgvsp: ENST00000577390.1:c.519T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.519T>C
  hgvsp: ENST00000583382.1:c.519T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His173His
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

16-61935161-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935161
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935161
    reference: chr 16
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.469G>C
  hgvsp: ENSP00000299345.6:p.Val157Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.469G>C
  hgvsp: ENSP00000462701.1:p.Val157Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.469G>C
  hgvsp: ENSP00000463511.1:p.Val157Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.469G>C
  hgvsp: ENSP00000462976.1:p.Val157Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.445G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.469G>C
  hgvsp: ENSP00000463266.1:p.Val157Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.469G>C
  hgvsp: ENSP00000462018.1:p.Val157Leu
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4314
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val157Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

16-61935171-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935171
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935171
    reference: chr 16
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.459T>C
  hgvsp: ENST00000583382.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.435T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.459T>C
  hgvsp: ENST00000299345.6:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.459T>C
  hgvsp: ENST00000584337.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.459T>C
  hgvsp: ENST00000585315.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.459T>C
  hgvsp: ENST00000577390.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.459T>C
  hgvsp: ENST00000577730.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25229
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe153Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-61935182-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935182
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935182
    reference: chr 16
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.448C>T
  hgvsp: ENSP00000462701.1:p.Pro150Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.448C>T
  hgvsp: ENSP00000463266.1:p.Pro150Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.448C>T
  hgvsp: ENSP00000299345.6:p.Pro150Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.448C>T
  hgvsp: ENSP00000462976.1:p.Pro150Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.448C>T
  hgvsp: ENSP00000462018.1:p.Pro150Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.448C>T
  hgvsp: ENSP00000463511.1:p.Pro150Ser
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.424C>T
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4312
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro150Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

16-61935184-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935184
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935184
    reference: chr 16
allele count: 8
allele frequency: 6.590763045591603e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.422C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.446C>T
  hgvsp: ENSP00000463511.1:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.446C>T
  hgvsp: ENSP00000299345.6:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.446C>T
  hgvsp: ENSP00000462976.1:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.446C>T
  hgvsp: ENSP00000462018.1:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.446C>T
  hgvsp: ENSP00000462701.1:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.446C>T
  hgvsp: ENSP00000463266.1:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14498
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro149Leu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

16-61935231-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935231
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935231
    reference: chr 16
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.375C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.399C>A
  hgvsp: ENST00000583382.1:c.399C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.399C>A
  hgvsp: ENST00000585315.1:c.399C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.399C>A
  hgvsp: ENST00000577390.1:c.399C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.399C>A
  hgvsp: ENST00000584337.1:c.399C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.399C>A
  hgvsp: ENST00000299345.6:c.399C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.399C>A
  hgvsp: ENST00000577730.1:c.399C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr133Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

16-61935237-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935237
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935237
    reference: chr 16
allele count: 3
allele frequency: 2.471128976458378e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.369G>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.393G>A
  hgvsp: ENST00000583382.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.393G>A
  hgvsp: ENST00000577390.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.393G>A
  hgvsp: ENST00000299345.6:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.393G>A
  hgvsp: ENST00000584337.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.393G>A
  hgvsp: ENST00000585315.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.393G>A
  hgvsp: ENST00000577730.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu131Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

16-61935263-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935263
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935263
    reference: chr 16
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.367A>G
  hgvsp: ENSP00000463266.1:p.Arg123Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.367A>G
  hgvsp: ENSP00000462701.1:p.Arg123Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.367A>G
  hgvsp: ENSP00000462976.1:p.Arg123Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.343A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.367A>G
  hgvsp: ENSP00000299345.6:p.Arg123Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.367A>G
  hgvsp: ENSP00000462018.1:p.Arg123Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.367A>G
  hgvsp: ENSP00000463511.1:p.Arg123Gly
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42002
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg123Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

16-61935266-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935266
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935266
    reference: chr 16
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.364A>G
  hgvsp: ENSP00000462701.1:p.Lys122Glu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.364A>G
  hgvsp: ENSP00000462976.1:p.Lys122Glu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.364A>G
  hgvsp: ENSP00000462018.1:p.Lys122Glu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.364A>G
  hgvsp: ENSP00000463266.1:p.Lys122Glu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.364A>G
  hgvsp: ENSP00000463511.1:p.Lys122Glu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.340A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.364A>G
  hgvsp: ENSP00000299345.6:p.Lys122Glu
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4309
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys122Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

16-61935276-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935276
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935276
    reference: chr 16
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.354C>T
  hgvsp: ENST00000584337.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.354C>T
  hgvsp: ENST00000577730.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.330C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.354C>T
  hgvsp: ENST00000585315.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.354C>T
  hgvsp: ENST00000577390.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.354C>T
  hgvsp: ENST00000299345.6:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.354C>T
  hgvsp: ENST00000583382.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41960
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4306
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile118Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

16-61935278-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935278
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935278
    reference: chr 16
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.352A>G
  hgvsp: ENSP00000462701.1:p.Ile118Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.352A>G
  hgvsp: ENSP00000299345.6:p.Ile118Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.352A>G
  hgvsp: ENSP00000462018.1:p.Ile118Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.352A>G
  hgvsp: ENSP00000463511.1:p.Ile118Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.328A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.352A>G
  hgvsp: ENSP00000463266.1:p.Ile118Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.352A>G
  hgvsp: ENSP00000462976.1:p.Ile118Val
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41953
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile118Val
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

16-61935280-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935280
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935280
    reference: chr 16
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.350A>T
  hgvsp: ENSP00000462018.1:p.Asp117Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.326A>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.350A>T
  hgvsp: ENSP00000463511.1:p.Asp117Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.350A>T
  hgvsp: ENSP00000463266.1:p.Asp117Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.350A>T
  hgvsp: ENSP00000462976.1:p.Asp117Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.350A>T
  hgvsp: ENSP00000462701.1:p.Asp117Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.350A>T
  hgvsp: ENSP00000299345.6:p.Asp117Val
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4305
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp117Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-61935282-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935282
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935282
    reference: chr 16
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.348A>G
  hgvsp: ENST00000577390.1:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.324A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.348A>G
  hgvsp: ENST00000584337.1:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.348A>G
  hgvsp: ENST00000577730.1:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.348A>G
  hgvsp: ENST00000583382.1:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.348A>G
  hgvsp: ENST00000585315.1:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.348A>G
  hgvsp: ENST00000299345.6:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41946
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly116Gly
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

16-61935282-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935282
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935282
    reference: chr 16
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.348A>C
  hgvsp: ENST00000577390.1:c.348A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.348A>C
  hgvsp: ENST00000585315.1:c.348A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.348A>C
  hgvsp: ENST00000583382.1:c.348A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.348A>C
  hgvsp: ENST00000577730.1:c.348A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.348A>C
  hgvsp: ENST00000299345.6:c.348A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.324A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.348A>C
  hgvsp: ENST00000584337.1:c.348A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11766
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly116Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

16-61935288-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935288
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935289
    reference: chr 16
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.341dupT
  hgvsp: ENSP00000462701.1:p.Thr115AsnfsTer11
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.341dupT
  hgvsp: ENSP00000462018.1:p.Thr115AsnfsTer11
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.341dupT
  hgvsp: ENSP00000462976.1:p.Thr115AsnfsTer11
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.341dupT
  hgvsp: ENSP00000463266.1:p.Thr115AsnfsTer11
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.341dupT
  hgvsp: ENSP00000299345.6:p.Thr115AsnfsTer11
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.341dupT
  hgvsp: ENSP00000463511.1:p.Thr115AsnfsTer11
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.317dupT
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr115AsnfsTer11
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

16-61935308-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935308
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935308
    reference: chr 16
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.322A>G
  hgvsp: ENSP00000463266.1:p.Ile108Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.322A>G
  hgvsp: ENSP00000462701.1:p.Ile108Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.527A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.322A>G
  hgvsp: ENSP00000299345.6:p.Ile108Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.322A>G
  hgvsp: ENSP00000463511.1:p.Ile108Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.322A>G
  hgvsp: ENSP00000462018.1:p.Ile108Val
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.298A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.322A>G
  hgvsp: ENSP00000462976.1:p.Ile108Val
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41823
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile108Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

16-61935312-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935312
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935312
    reference: chr 16
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.318G>A
  hgvsp: ENST00000585315.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.294G>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.318G>A
  hgvsp: ENST00000299345.6:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.318G>A
  hgvsp: ENST00000583382.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.318G>A
  hgvsp: ENST00000577730.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.318G>A
  hgvsp: ENST00000577390.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.318G>A
  hgvsp: ENST00000584337.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.523G>A
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41820
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly106Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/16-61935315-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935315
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935315
    reference: chr 16
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.315T>G
  hgvsp: ENST00000577390.1:c.315T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.315T>G
  hgvsp: ENST00000577730.1:c.315T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.315T>G
  hgvsp: ENST00000583382.1:c.315T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.520T>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.315T>G
  hgvsp: ENST00000585315.1:c.315T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.315T>G
  hgvsp: ENST00000584337.1:c.315T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.315T>G
  hgvsp: ENST00000299345.6:c.315T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.291T>G
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7860
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala105Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum

16-61935330-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935330
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935330
    reference: chr 16
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.300A>G
  hgvsp: ENST00000583382.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.300A>G
  hgvsp: ENST00000585315.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.300A>G
  hgvsp: ENST00000584337.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.300A>G
  hgvsp: ENST00000577390.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.300A>G
  hgvsp: ENST00000577730.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.505A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.276A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.300A>G
  hgvsp: ENST00000299345.6:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41668
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu100Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

16-61935339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935339
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935339
    reference: chr 16
allele count: 9
allele frequency: 7.429297848805534e-5
allele num: 121142
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.291G>A
  hgvsp: ENST00000577390.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.291G>A
  hgvsp: ENST00000584337.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.291G>A
  hgvsp: ENST00000583382.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.291G>A
  hgvsp: ENST00000585315.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.291G>A
  hgvsp: ENST00000577730.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.267G>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.496G>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.291G>A
  hgvsp: ENST00000299345.6:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4296
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys97Lys
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

16-61935359-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935359
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935359
    reference: chr 16
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.476C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.271C>G
  hgvsp: ENSP00000462018.1:p.Pro91Ala
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.271C>G
  hgvsp: ENSP00000462976.1:p.Pro91Ala
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.271C>G
  hgvsp: ENSP00000463511.1:p.Pro91Ala
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.271C>G
  hgvsp: ENSP00000462701.1:p.Pro91Ala
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.247C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.271C>G
  hgvsp: ENSP00000463266.1:p.Pro91Ala
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.271C>G
  hgvsp: ENSP00000299345.6:p.Pro91Ala
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41197
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro91Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

16-61935393-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935393
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935393
    reference: chr 16
allele count: 2
allele frequency: 1.700824900076537e-5
allele num: 117590
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.253-16C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.253-16C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.458-16C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.253-16C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.253-16C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.253-16C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.253-16C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.229-16C>A
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4732
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

16-61935395-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935395
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935395
    reference: chr 16
allele count: 8
allele frequency: 6.811525100469996e-5
allele num: 117448
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.253-18T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.253-18T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.253-18T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.253-18T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.458-18T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.229-18T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.253-18T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.253-18T>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5024
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4248
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 36340
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS

16-61935426-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935426
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935427
    reference: chr 16
allele count: 6
allele frequency: 5.554835484289074e-5
allele num: 108014
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.253-50dupA
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.253-50dupA
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.253-50dupA
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.253-50dupA
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.458-50dupA
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.229-50dupA
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.253-50dupA
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.253-50dupA
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13796
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11220
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4885
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10554
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7031
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6969
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3305
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD

16-61935429-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61935429
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 61935429
    reference: chr 16
allele count: 18
allele frequency: 1.688650393080286e-4
allele num: 106594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.253-52A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.253-52A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.253-52A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.253-52A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000577228
  gene symbol: CDH8
  hgvsc: ENST00000577228.1:n.458-52A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.253-52A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.229-52A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.253-52A>G
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11525
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10550
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13706
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2482
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6109
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3236
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3565
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-62055009-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055009
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055009
    reference: chr 16
allele count: 1
allele frequency: 8.440385556812235e-6
allele num: 118478
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+47T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+47T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+47T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+47T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+47T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+47T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+47T>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3493
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

16-62055021-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055021
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055021
    reference: chr 16
allele count: 2
allele frequency: 1.683558368968652e-5
allele num: 118796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+35C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+35C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+35C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+35C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+35C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+35C>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+35C>A
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

16-62055027-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055027
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055027
    reference: chr 16
allele count: 1
allele frequency: 8.394050297149381e-6
allele num: 119132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+29C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+29C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+29C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+29C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+29C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+29C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+29C>G
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29521
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/16-62055028-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055028
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055028
    reference: chr 16
allele count: 2
allele frequency: 1.677936808899777e-5
allele num: 119194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+28T>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+28T>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+28T>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+28T>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+28T>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+28T>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+28T>G
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3009
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29531
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

16-62055031-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055031
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055031
    reference: chr 16
allele count: 2
allele frequency: 1.67619303038938e-5
allele num: 119318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+25A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+25A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+25A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+25A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+25A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+25A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+25A>G
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

16-62055031-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055031
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055031
    reference: chr 16
allele count: 2
allele frequency: 1.67619303038938e-5
allele num: 119318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+25A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+25A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+25A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+25A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+25A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+25A>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+25A>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29532
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10891
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

16-62055033-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055033
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055033
    reference: chr 16
allele count: 1
allele frequency: 8.372684952610603e-6
allele num: 119436
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+23C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+23C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+23C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+23C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+23C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+23C>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+23C>G
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6336
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3025
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

16-62055041-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055041
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055041
    reference: chr 16
allele count: 3
allele frequency: 2.501751225858101e-5
allele num: 119916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+15T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+15T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+15T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+15T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+15T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+15T>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+15T>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2072
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29537
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD

16-62055046-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055046
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055046
    reference: chr 16
allele count: 2
allele frequency: 1.665084836072398e-5
allele num: 120114
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.252+10G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.228+10G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.252+10G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.252+10G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.252+10G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.252+10G>C
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.252+10G>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3826
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

16-62055089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055089
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055089
    reference: chr 16
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.219G>A
  hgvsp: ENST00000577730.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462847
  ensembl transcript: ENST00000584506
  gene symbol: CDH8
  hgvsc: ENST00000584506.1:c.219G>A
  hgvsp: ENST00000584506.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.219G>A
  hgvsp: ENST00000583382.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.219G>A
  hgvsp: ENST00000299345.6:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.219G>A
  hgvsp: ENST00000577390.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.219G>A
  hgvsp: ENST00000584337.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.195G>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.219G>A
  hgvsp: ENST00000585315.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13076
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu73Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-62055093-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055093
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055093
    reference: chr 16
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.215A>G
  hgvsp: ENSP00000463511.1:p.Glu72Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.215A>G
  hgvsp: ENSP00000299345.6:p.Glu72Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.215A>G
  hgvsp: ENSP00000462976.1:p.Glu72Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.215A>G
  hgvsp: ENSP00000462701.1:p.Glu72Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.215A>G
  hgvsp: ENSP00000462018.1:p.Glu72Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.215A>G
  hgvsp: ENSP00000463266.1:p.Glu72Gly
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.191A>G
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462847
  ensembl transcript: ENST00000584506
  gene symbol: CDH8
  hgvsc: ENST00000584506.1:c.215A>G
  hgvsp: ENSP00000462847.1:p.Glu72Gly
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu72Gly
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-62055098-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055098
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055098
    reference: chr 16
allele count: 1
allele frequency: 8.255456856982466e-6
allele num: 121132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.210C>T
  hgvsp: ENST00000583382.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.210C>T
  hgvsp: ENST00000585315.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.210C>T
  hgvsp: ENST00000577390.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.186C>T
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.210C>T
  hgvsp: ENST00000299345.6:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462847
  ensembl transcript: ENST00000584506
  gene symbol: CDH8
  hgvsc: ENST00000584506.1:c.210C>T
  hgvsp: ENST00000584506.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.210C>T
  hgvsp: ENST00000577730.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.210C>T
  hgvsp: ENST00000584337.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val70Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

16-62055101-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055101
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055101
    reference: chr 16
allele count: 1
allele frequency: 8.254366559910193e-6
allele num: 121148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.207T>A
  hgvsp: ENSP00000462018.1:p.Phe69Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.207T>A
  hgvsp: ENSP00000462976.1:p.Phe69Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.183T>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.207T>A
  hgvsp: ENSP00000462701.1:p.Phe69Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.207T>A
  hgvsp: ENSP00000299345.6:p.Phe69Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462847
  ensembl transcript: ENST00000584506
  gene symbol: CDH8
  hgvsc: ENST00000584506.1:c.207T>A
  hgvsp: ENSP00000462847.1:p.Phe69Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.207T>A
  hgvsp: ENSP00000463266.1:p.Phe69Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.207T>A
  hgvsp: ENSP00000463511.1:p.Phe69Leu
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe69Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

16-62055105-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055105
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055105
    reference: chr 16
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.203T>C
  hgvsp: ENSP00000463266.1:p.Met68Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.203T>C
  hgvsp: ENSP00000462976.1:p.Met68Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.203T>C
  hgvsp: ENSP00000463511.1:p.Met68Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462847
  ensembl transcript: ENST00000584506
  gene symbol: CDH8
  hgvsc: ENST00000584506.1:c.203T>C
  hgvsp: ENSP00000462847.1:p.Met68Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.203T>C
  hgvsp: ENSP00000299345.6:p.Met68Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.203T>C
  hgvsp: ENSP00000462701.1:p.Met68Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.203T>C
  hgvsp: ENSP00000462018.1:p.Met68Thr
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.179T>C
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met68Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

16-62055118-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055118
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055118
    reference: chr 16
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.190G>A
  hgvsp: ENSP00000462701.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.190G>A
  hgvsp: ENSP00000299345.6:p.Val64Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.190G>A
  hgvsp: ENSP00000462976.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.190G>A
  hgvsp: ENSP00000463511.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.190G>A
  hgvsp: ENSP00000463266.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462847
  ensembl transcript: ENST00000584506
  gene symbol: CDH8
  hgvsc: ENST00000584506.1:c.190G>A
  hgvsp: ENSP00000462847.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.190G>A
  hgvsp: ENSP00000462018.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.166G>A
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1998
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val64Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-62055123-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055123
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055123
    reference: chr 16
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.185G>A
  hgvsp: ENSP00000299345.6:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.185G>A
  hgvsp: ENSP00000462018.1:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.185G>A
  hgvsp: ENSP00000462701.1:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462847
  ensembl transcript: ENST00000584506
  gene symbol: CDH8
  hgvsc: ENST00000584506.1:c.185G>A
  hgvsp: ENSP00000462847.1:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.185G>A
  hgvsp: ENSP00000462976.1:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.185G>A
  hgvsp: ENSP00000463511.1:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.161G>A
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.185G>A
  hgvsp: ENSP00000463266.1:p.Gly62Asp
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly62Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-62055135-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62055135
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 62055135
    reference: chr 16
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462976
  ensembl transcript: ENST00000583382
  gene symbol: CDH8
  hgvsc: ENST00000583382.1:c.173G>T
  hgvsp: ENSP00000462976.1:p.Arg58Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462018
  ensembl transcript: ENST00000577730
  gene symbol: CDH8
  hgvsc: ENST00000577730.1:c.173G>T
  hgvsp: ENSP00000462018.1:p.Arg58Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462701
  ensembl transcript: ENST00000577390
  gene symbol: CDH8
  hgvsc: ENST00000577390.1:c.173G>T
  hgvsp: ENSP00000462701.1:p.Arg58Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463266
  ensembl transcript: ENST00000585315
  gene symbol: CDH8
  hgvsc: ENST00000585315.1:c.173G>T
  hgvsp: ENSP00000463266.1:p.Arg58Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000463511
  ensembl transcript: ENST00000584337
  gene symbol: CDH8
  hgvsc: ENST00000584337.1:c.173G>T
  hgvsp: ENSP00000463511.1:p.Arg58Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000299345
  ensembl transcript: ENST00000299345
  gene symbol: CDH8
  hgvsc: ENST00000299345.6:c.173G>T
  hgvsp: ENSP00000299345.6:p.Arg58Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000150394
  ensembl protein: ENSP00000462847
  ensembl transcript: ENST00000584506
  gene symbol: CDH8
  hgvsc: ENST00000584506.1:c.173G>T
  hgvsp: ENSP00000462847.1:p.Arg58Leu
  variant of: http://identifiers.org/hgnc/1767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000150394
  ensembl transcript: ENST00000584966
  gene symbol: CDH8
  hgvsc: ENST00000584966.1:n.149G>T
  variant of: http://identifiers.org/hgnc/1767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg58Leu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 623
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3222
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.015218502812114e-5
allele num: 66498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

FS
type: SiteQuality
SIO_000300: 1.3642e1

QD
type: SiteQuality
SIO_000300: 1.577e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.38e-1

DP
type: SiteQuality
SIO_000300: 1.767784e6

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -7.881e-1

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2231
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.208255159474672e-4
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66426
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

FS
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.305e1

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

DP
type: SiteQuality
SIO_000300: 1.76364e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
all individuals: 781
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2219
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3203
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2000
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.294e0

MQ
type: SiteQuality
SIO_000300: 5.882e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

FS
type: SiteQuality
SIO_000300: 8.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.341e1

DP
type: SiteQuality
SIO_000300: 1.76198e6

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.952e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40726
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.488574917146346e-4
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015954398769491e-5
allele num: 66314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.26e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.625e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-1

DP
type: SiteQuality
SIO_000300: 1.759835e6

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.75e-1

QD
type: SiteQuality
SIO_000300: 1.536e1

GenotypeQuality
all individuals: 612
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40796
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3184
bin: 9.75e1
variant carriers: 8

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.654373431164318e-5
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.034456748031258e-5
allele num: 66286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215214485356665e-4
allele num: 16458
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.536e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

DP
type: SiteQuality
SIO_000300: 1.758275e6

GenotypeQuality
all individuals: 2155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3187
bin: 9.75e1
variant carriers: 44

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8454
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1353
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 4.985195480089431e-4
allele num: 66196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.652300949598247e-4
allele num: 16428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.5220700152207e-4
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.869220352099052e-4
allele num: 10338
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.352e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

DP
type: SiteQuality
SIO_000300: 1.754928e6

FS
type: SiteQuality
SIO_000300: 6.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

GenotypeQuality
all individuals: 3131
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1856
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.187930624851509e-4
allele num: 8418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.075334143377886e-5
allele num: 65840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.168e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

DP
type: SiteQuality
SIO_000300: 1.737637e6

VQSLOD
type: SiteQuality
SIO_000300: 8.39e-1

GenotypeQuality
all individuals: 169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3120
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.383790226460072e-4
allele num: 8390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523693432881304e-5
allele num: 65630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

QD
type: SiteQuality
SIO_000300: 1.295e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.731934e6

MQRankSum
type: SiteQuality
SIO_000300: -1.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.956e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3107
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1934
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.976057462090982e-5
allele num: 10024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8182
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
SIO_000300: -2.361e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.378e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

FS
type: SiteQuality
SIO_000300: 1.6927e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e-1

QD
type: SiteQuality
SIO_000300: 1.665e1

DP
type: SiteQuality
SIO_000300: 1.695286e6

GenotypeQuality
all individuals: 1624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35297
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1822
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581827960391028e-5
allele num: 63218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.71e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

FS
type: SiteQuality
SIO_000300: 9.364000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -2.285e0

MQ
type: SiteQuality
SIO_000300: 5.098e1

DP
type: SiteQuality
SIO_000300: 1.627535e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 7.25e1
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GenotypeQuality
all individuals: 10779
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.756567425569177e-5
allele num: 11420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.879e0

QD
type: SiteQuality
SIO_000300: 1.205e1

MQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.006e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.089e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: -2.52e-2

DP
type: SiteQuality
SIO_000300: 2.530334e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.352432981832041e-5
allele num: 15742
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.423e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.606812e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 2.191e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e0

VQSLOD
type: SiteQuality
SIO_000300: -4.685e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5713
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.522306287503261e-5
allele num: 15332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.454e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: -2.872e-1

DP
type: SiteQuality
SIO_000300: 1.481924e6

MQRankSum
type: SiteQuality
SIO_000300: -5.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.343e0

QD
type: SiteQuality
SIO_000300: 1.336e1

GenotypeQuality
all individuals: 2029
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1216
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 502
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variant carriers: 0

GenotypeQuality
all individuals: 6814
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.605136436597111e-4
allele num: 6230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10600
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.197291e6

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.359e1

FS
type: SiteQuality
SIO_000300: 5.066e0

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.65e-1

GenotypeQuality
all individuals: 6814
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3077
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variant carriers: 3

GenotypeQuality
all individuals: 1111
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variant carriers: 0

GenotypeQuality
all individuals: 715
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GenotypeQuality
all individuals: 502
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.304289402029775e-5
allele num: 56558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6230
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6096
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14580
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

DP
type: SiteQuality
SIO_000300: 1.197291e6

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

FS
type: SiteQuality
SIO_000300: 5.066e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.359e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10552
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14580
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.605136436597111e-4
allele num: 6230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6096
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.65e-1

FS
type: SiteQuality
SIO_000300: 5.066e0

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

DP
type: SiteQuality
SIO_000300: 1.197291e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3777
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.998880179171333e-5
allele num: 14288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8000
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.167774e6

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.549e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.998e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

European (Non-Finnish)
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allele count: 15
allele frequency: 2.2968793066487e-4
allele num: 65306
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.776672e6

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65364
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.516300227445034e-4
allele num: 13190
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ClippingRankSum
type: SiteQuality
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QD
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BaseQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.901e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.165e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 517
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529753709652746e-5
allele num: 65370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.356e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

DP
type: SiteQuality
SIO_000300: 1.784473e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.091e1

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65426
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.400828892835997e-5
allele num: 13512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.66e-1

FS
type: SiteQuality
SIO_000300: 2.749e0

QD
type: SiteQuality
SIO_000300: 1.104e1

VQSLOD
type: SiteQuality
SIO_000300: -4.878e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

DP
type: SiteQuality
SIO_000300: 1.795623e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 37447
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variant carriers: 0

GenotypeQuality
all individuals: 7604
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.769441187964049e-5
allele num: 10236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 2.749e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.66e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

MQ
type: SiteQuality
SIO_000300: 5.923e1

VQSLOD
type: SiteQuality
SIO_000300: -4.878e-1

DP
type: SiteQuality
SIO_000300: 1.795623e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7607
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variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.589e1

FS
type: SiteQuality
SIO_000300: 6.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

DP
type: SiteQuality
SIO_000300: 1.796943e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37996
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737317581653926e-4
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.754194303550527e-5
allele num: 10252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.441331746467698e-4
allele num: 65538
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.455e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 1.802744e6

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

FS
type: SiteQuality
SIO_000300: 2.422e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 417
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variant carriers: 0

GenotypeQuality
all individuals: 512
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.08e-1

DP
type: SiteQuality
SIO_000300: 1.81553e6

QD
type: SiteQuality
SIO_000300: 1.292e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.46e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507249871883761e-5
allele num: 66346
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.845032e6

VQSLOD
type: SiteQuality
SIO_000300: 4.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.357e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.35e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.228201295465869e-5
allele num: 16056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66368
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.8458e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.711e1

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.14e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.849106e6

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.853197e6

QD
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQ
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.929e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.55e-2

FS
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.116e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

MQRankSum
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SIO_000300: 8.22e-1

MQ
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SIO_000300: 6.0e1

DP
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SIO_000300: 1.85559e6

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
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SIO_000300: 2.34e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

VQSLOD
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SIO_000300: 3.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.89e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 3.171e0

DP
type: SiteQuality
SIO_000300: 1.855899e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.218e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.856043e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.965e0

VQSLOD
type: SiteQuality
SIO_000300: -9.837e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

QD
type: SiteQuality
SIO_000300: 1.488e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.856508e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.074e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 8
allele frequency: 4.845548152634767e-4
allele num: 16510
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MQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

BaseQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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ClippingRankSum
type: SiteQuality
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MQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Non-Finnish)
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allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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African
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European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
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South Asian
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DP
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InbreedingCoeff
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ClippingRankSum
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FS
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BaseQRankSum
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QD
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MQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

African
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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Other
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele num: 66732
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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DP
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VQSLOD
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BaseQRankSum
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MQ
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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ReadPosRankSum
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DP
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FS
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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MQRankSum
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DP
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MQ
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ReadPosRankSum
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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South Asian
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Latino
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European (Non-Finnish)
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num of homozygotes: 0

African
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MQ
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FS
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QD
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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DP
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FS
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QD
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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VQSLOD
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QD
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FS
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66720
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South Asian
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East Asian
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African
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European (Finnish)
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Latino
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VQSLOD
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FS
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQ
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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South Asian
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Latino
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East Asian
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Other
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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QD
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FS
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Non-Finnish)
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Other
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Latino
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European (Finnish)
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QD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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VQSLOD
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MQ
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FS
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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South Asian
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African
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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SIO_000300: -5.056e-1

FS
type: SiteQuality
SIO_000300: 1.707e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

QD
type: SiteQuality
SIO_000300: 1.469e1

DP
type: SiteQuality
SIO_000300: 1.85523e6

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.853408e6

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: -1.872e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e0

FS
type: SiteQuality
SIO_000300: 1.369e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.374e0

QD
type: SiteQuality
SIO_000300: 2.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

Other
type: Population
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allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.003093185981561e-5
allele num: 66598
num of homozygotes: 0

European (Finnish)
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allele count: 6
allele frequency: 9.082652134423251e-4
allele num: 6606
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.775e0

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

DP
type: SiteQuality
SIO_000300: 1.852469e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.663e0

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

QD
type: SiteQuality
SIO_000300: 1.306e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.57e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66348
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.103e1

FS
type: SiteQuality
SIO_000300: 2.873e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

DP
type: SiteQuality
SIO_000300: 1.842821e6

VQSLOD
type: SiteQuality
SIO_000300: -2.221e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14824
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.755001755001755e-4
allele num: 11396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.723e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.907e1

MQRankSum
type: SiteQuality
SIO_000300: 3.85e-1

FS
type: SiteQuality
SIO_000300: 1.211e0

QD
type: SiteQuality
SIO_000300: 1.314e1

VQSLOD
type: SiteQuality
SIO_000300: 5.600000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.770578e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 5.413452429286778e-4
allele num: 14778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.48e-1

QD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.36e-1

FS
type: SiteQuality
SIO_000300: 7.75e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 5
allele frequency: 5.27648796960743e-4
allele num: 9476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.649022129876983e-5
allele num: 60642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8282
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FS
type: SiteQuality
SIO_000300: 3.114e0

DP
type: SiteQuality
SIO_000300: 1.380592e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 3.003704568968394e-4
allele num: 59926
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6478
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10974
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8202
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Other
type: Population
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allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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FS
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65602
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.758101243650377e-5
allele num: 11418
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -9.24e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.489009e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1987
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variant carriers: 0

GenotypeQuality
all individuals: 9253
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 2
allele frequency: 1.975503753457131e-4
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65728
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.7875e1

MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

QD
type: SiteQuality
SIO_000300: 1.003e1

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3001
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3679
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10175
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.366993505666624e-5
allele num: 15706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.297e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.244e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.67e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

DP
type: SiteQuality
SIO_000300: 2.524358e6

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
all individuals: 222
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3130
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.03702128951924e-5
allele num: 65854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.526289e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.341e1

MQRankSum
type: SiteQuality
SIO_000300: -1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 7.493e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3023
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29532
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.034901365705614e-5
allele num: 65900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

FS
type: SiteQuality
SIO_000300: 2.177e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

DP
type: SiteQuality
SIO_000300: 2.531848e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
all individuals: 1977
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3023
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.971608832807571e-4
allele num: 10144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 2.177e0

QD
type: SiteQuality
SIO_000300: 1.402e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

DP
type: SiteQuality
SIO_000300: 2.531848e6

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11142
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29530
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516576177621402e-5
allele num: 65938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.212e0

QD
type: SiteQuality
SIO_000300: 8.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.373e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

DP
type: SiteQuality
SIO_000300: 2.535904e6

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11989
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3152
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1979
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3822
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.858966414673442e-4
allele num: 16138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.45e0

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

FS
type: SiteQuality
SIO_000300: 5.972e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.548427e6

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

QD
type: SiteQuality
SIO_000300: 1.561e1

GenotypeQuality
all individuals: 1977
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12120
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29538
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021421881137263e-5
allele num: 66194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 7.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-2

FS
type: SiteQuality
SIO_000300: 5.694e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

MQ
type: SiteQuality
SIO_000300: 5.997e1

QD
type: SiteQuality
SIO_000300: 1.419e1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 2.553885e6

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4032
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3130
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3188
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29561
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2175
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.722958827634333e-5
allele num: 11464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.376e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.573306e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.01e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.444e1

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4027
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3190
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13062
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29568
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3129
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.52e1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.187e0

DP
type: SiteQuality
SIO_000300: 2.573629e6

MQRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3134
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29570
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.673e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 2.385e0

VQSLOD
type: SiteQuality
SIO_000300: 2.72e-1

QD
type: SiteQuality
SIO_000300: 1.259e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

DP
type: SiteQuality
SIO_000300: 2.574356e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.9e-2

GenotypeQuality
all individuals: 3162
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13050
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.352e0

DP
type: SiteQuality
SIO_000300: 2.574437e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.45e-2

QD
type: SiteQuality
SIO_000300: 9.5e-1

MQ
type: SiteQuality
SIO_000300: 5.885e1

GenotypeQuality
all individuals: 13041
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.043e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

DP
type: SiteQuality
SIO_000300: 2.57463e6

QD
type: SiteQuality
SIO_000300: 1.164e1

VQSLOD
type: SiteQuality
SIO_000300: 8.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.841e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13028
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29573
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3207
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

QD
type: SiteQuality
SIO_000300: 1.516e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -7.013e-1

DP
type: SiteQuality
SIO_000300: 2.57563e6

FS
type: SiteQuality
SIO_000300: 5.874e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.831e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

GenotypeQuality
all individuals: 3141
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13043
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4028
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.271e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.942e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.48e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

DP
type: SiteQuality
SIO_000300: 2.575991e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.43e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

QD
type: SiteQuality
SIO_000300: 1.533e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1