16-82672953-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82672953
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82672953
    reference: chr 16
allele count: 1
allele frequency: 1.033484911120298e-4
allele num: 9676
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.81-12G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.247-12G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12211G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12211G>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/16-82672989-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82672989
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82672989
    reference: chr 16
allele count: 2
allele frequency: 1.868460388639761e-4
allele num: 10704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.271A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.105A>C
  hgvsp: ENST00000268613.10:c.105A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12247A>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala35Ala
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

16-82673008-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673008
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673008
    reference: chr 16
allele count: 1
allele frequency: 9.300595238095238e-5
allele num: 10752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.124C>T
  hgvsp: ENSP00000268613.10:p.His42Tyr
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.290C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12266C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His42Tyr
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

16-82673010-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673010
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673010
    reference: chr 16
allele count: 1
allele frequency: 9.300595238095238e-5
allele num: 10752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.126T>G
  hgvsp: ENSP00000268613.10:p.His42Gln
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.292T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12268T>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His42Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

16-82673040-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673040
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673040
    reference: chr 16
allele count: 1
allele frequency: 9.288500835965076e-5
allele num: 10766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.322G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12298G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.156G>T
  hgvsp: ENST00000268613.10:c.156G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12298G>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly52Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

16-82673041-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673041
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673041
    reference: chr 16
allele count: 8
allele frequency: 7.430800668772061e-4
allele num: 10766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.323C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.157C>T
  hgvsp: ENSP00000268613.10:p.Arg53Cys
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12299C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg53Cys
num of homozygotes: 1
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

16-82673042-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673042
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673042
    reference: chr 16
allele count: 3
allele frequency: 2.787068004459309e-4
allele num: 10764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.158G>A
  hgvsp: ENSP00000268613.10:p.Arg53His
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.324G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12300G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg53His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

16-82673047-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673047
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673047
    reference: chr 16
allele count: 10766
allele frequency: 9.959296947271046e-1
allele num: 10810
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.163C>T
  hgvsp: ENSP00000268613.10:p.Pro55Ser
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.329C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12305C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 489
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.5e0
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.75e1
  variant carriers: 499
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 3.75e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 2.5e0
  variant carriers: 1044
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.25e1
  variant carriers: 539
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.75e1
  variant carriers: 290
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.75e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 397
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 8.75e1
  variant carriers: 365
genotype quality: GenotypeQuality
hgvs: p.Pro55Ser
num of homozygotes: 5365
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP

16-82673068-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673068
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673068
    reference: chr 16
allele count: 1
allele frequency: 9.300595238095238e-5
allele num: 10752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.184C>T
  hgvsp: ENSP00000268613.10:p.Gln62Ter
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.350C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12326C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln62Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

16-82673069-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673069
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673069
    reference: chr 16
allele count: 2
allele frequency: 1.860811313732788e-4
allele num: 10748
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.185A>G
  hgvsp: ENSP00000268613.10:p.Gln62Arg
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.351A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12327A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln62Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

16-82673071-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673071
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673071
    reference: chr 16
allele count: 6
allele frequency: 5.584512285927029e-4
allele num: 10744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.352+1G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+1G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12329G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.186+1G>A
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

16-82673090-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673090
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673090
    reference: chr 16
allele count: 22
allele frequency: 2.055690525135489e-3
allele num: 10702
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+20T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.352+20T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12348T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12348T>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

16-82673094-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673094
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673094
    reference: chr 16
allele count: 7
allele frequency: 6.54940119760479e-4
allele num: 10688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.352+24G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+24G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12352G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12352G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

16-82673094-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673094
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673094
    reference: chr 16
allele count: 7
allele frequency: 6.54940119760479e-4
allele num: 10688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.352+24G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12352G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+24G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12352G>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

16-82673120-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82673120
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82673120
    reference: chr 16
allele count: 9
allele frequency: 8.51305334846765e-4
allele num: 10572
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+50G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.352+50G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+12378G>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

16-82722497-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82722497
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82722497
    reference: chr 16
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.46-16170G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+61755G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-30470G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+61755G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+61755G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+61755G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+61755G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+61755G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-34129G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+61755G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+61755G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+49427G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+61755G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

16-82722499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82722499
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82722499
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+61757C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+61757C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+61757C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+61757C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.46-16168C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+49429C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+61757C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-30468C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-34127C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+61757C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+61757C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+61757C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+61757C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

16-82722518-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82722518
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82722518
    reference: chr 16
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.46-16149G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+61776G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+61776G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+61776G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+61776G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+61776G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-34108G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-30449G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+61776G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+61776G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+49448G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+61776G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+61776G>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP

16-82722537-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82722537
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82722537
    reference: chr 16
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-34089G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-30430G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+61795G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+49467G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+61795G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+61795G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+61795G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+61795G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.46-16130G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+61795G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+61795G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+61795G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+61795G>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

16-82722614-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82722614
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82722614
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+61872A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+61872A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+49544A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-34012A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+61872A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-30353A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.46-16053A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+61872A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+61872A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+61872A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+61872A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+61872A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+61872A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

16-82722618-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82722618
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82722618
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+49548T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-34008T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.46-16049T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+61876T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-30349T>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

16-82738630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738630
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738630
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 2036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65560C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.46-37C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14337C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+77888C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17996C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

16-82738631-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738631
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738631
    reference: chr 16
allele count: 1
allele frequency: 4.545454545454545e-4
allele num: 2200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+77889G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+77889G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.46-36G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+77889G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+77889G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+77889G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14336G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+77889G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17995G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+77889G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+77889G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65561G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+77889G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP

16-82738670-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738670
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738670
    reference: chr 16
allele count: 9
allele frequency: 1.173708920187793e-3
allele num: 7668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17956C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+77928C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+77928C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.49C>T
  hgvsp: ENSP00000455781.1:p.Pro17Ser
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+77928C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14297C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+77928C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+77928C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+77928C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+77928C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+77928C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65600C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+77928C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro17Ser
num of homozygotes: 1
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-82738682-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738682
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738682
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 9334
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+77940A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+77940A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+77940A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17944A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+77940A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+77940A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+77940A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+77940A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+77940A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.61A>G
  hgvsp: ENSP00000455781.1:p.Thr21Ala
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14285A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65612A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+77940A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr21Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

16-82738703-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738703
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738703
    reference: chr 16
allele count: 1
allele frequency: 9.554748710108924e-5
allele num: 10466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.82C>T
  hgvsp: ENST00000562601.1:c.82C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14264C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+77961C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17923C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65633C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu28Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/16-82738714-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738714
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738713
    reference: chr 16
allele count: 2
allele frequency: 1.879345987596316e-4
allele num: 10642
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+77977delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14248delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+77977delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+77977delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+77977delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.98delA
  hgvsp: ENSP00000455781.1:p.Asn33IlefsTer19
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+77977delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+77977delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17907delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+77977delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65649delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+77977delA
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+77977delA
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn33IlefsTer19
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: CA
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

16-82738759-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738759
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738759
    reference: chr 16
allele count: 2
allele frequency: 1.867762420620097e-4
allele num: 10708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65689C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.138C>T
  hgvsp: ENST00000562601.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17867C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+78017C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14208C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly46Gly
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum

16-82738764-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738764
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738764
    reference: chr 16
allele count: 1
allele frequency: 9.340556697179151e-5
allele num: 10706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.143G>T
  hgvsp: ENSP00000455781.1:p.Arg48Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65694G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17862G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+78022G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14203G>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg48Met
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

16-82738774-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738774
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738774
    reference: chr 16
allele count: 1
allele frequency: 9.354536950420954e-5
allele num: 10690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.153A>G
  hgvsp: ENST00000562601.1:c.153A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17852A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14193A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+78032A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65704A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val51Val
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

16-82738783-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738783
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738783
    reference: chr 16
allele count: 4
allele frequency: 3.76081233546446e-4
allele num: 10636
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.162G>T
  hgvsp: ENSP00000455781.1:p.Leu54Phe
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+78041G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65713G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17843G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14184G>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu54Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

16-82738784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738784
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738784
    reference: chr 16
allele count: 4
allele frequency: 3.767897513187641e-4
allele num: 10616
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.163C>T
  hgvsp: ENSP00000455781.1:p.Leu55Phe
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14183C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65714C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+78042C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17842C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu55Phe
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

16-82738851-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82738851
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82738851
    reference: chr 16
allele count: 5
allele frequency: 5.899008966493629e-4
allele num: 8476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*26G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-14116G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+65781G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+78109G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-17775G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

16-82752922-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82752922
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82752922
    reference: chr 16
allele count: 2
allele frequency: 1.872659176029963e-4
allele num: 10680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92180A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-45A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92180A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14043A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92180A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92180A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3704A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92180A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79852A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92180A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92180A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92180A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92180A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

16-82752925-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82752925
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82752925
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 10680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92183G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-42G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92183G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14046G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92183G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92183G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92183G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92183G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92183G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3701G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79855G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92183G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92183G>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

16-82752950-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82752950
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82752950
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 10730
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92208C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92208C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92208C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79880C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92208C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92208C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-17C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3676C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92208C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14071C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92208C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92208C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92208C>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-82752954-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82752954
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82752954
    reference: chr 16
allele count: 3
allele frequency: 2.793816353138387e-4
allele num: 10738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92212A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92212A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79884A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92212A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92212A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92212A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.46-13A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14075A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3672A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92212A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92212A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92212A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92212A>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

16-82752974-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82752974
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82752974
    reference: chr 16
allele count: 1
allele frequency: 9.298865538404315e-5
allele num: 10754
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.53G>C
  hgvsp: ENSP00000457149.1:p.Gly18Ala
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14095G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92232G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92232G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92232G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3652G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92232G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92232G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92232G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79904G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92232G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92232G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92232G>C
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly18Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

16-82753003-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82753003
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82753003
    reference: chr 16
allele count: 13
allele frequency: 1.20750510867546e-3
allele num: 10766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.82C>T
  hgvsp: ENSP00000457149.1:p.Leu28Phe
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79933C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3623C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92261C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14124C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
hgvs: p.Leu28Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

16-82753013-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82753013
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82753013
    reference: chr 16
allele count: 1
allele frequency: 9.293680297397769e-5
allele num: 10760
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.92C>G
  hgvsp: ENSP00000457149.1:p.Ala31Gly
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92271C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79943C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92271C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92271C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92271C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92271C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92271C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92271C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3613C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14134C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92271C>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92271C>G
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala31Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

16-82753013-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82753013
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82753013
    reference: chr 16
allele count: 1
allele frequency: 9.293680297397769e-5
allele num: 10760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.92C>T
  hgvsp: ENSP00000457149.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14134C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92271C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3613C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79943C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala31Val
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-82753020-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82753020
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82753020
    reference: chr 16
allele count: 2
allele frequency: 1.859773107680863e-4
allele num: 10754
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79950A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3606A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92278A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92278A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14141A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92278A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92278A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92278A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92278A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92278A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.99A>G
  hgvsp: ENST00000568770.1:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92278A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92278A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln33Gln
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

16-82753038-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82753038
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82753038
    reference: chr 16
allele count: 9
allele frequency: 8.375209380234506e-4
allele num: 10746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92296C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92296C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14159C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92296C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92296C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3588C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+79968C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92296C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92296C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92296C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92296C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92296C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

16-82753071-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82753071
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82753071
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 10708
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*36T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92329T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+80001T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92329T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92329T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14192T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3555T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92329T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92329T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92329T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92329T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92329T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92329T>C
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

16-82753081-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82753081
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82753081
    reference: chr 16
allele count: 1
allele frequency: 9.368559115608019e-5
allele num: 10674
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*54+14202G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.45+92339G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.167+92339G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*45+1G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.45+92339G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.45+92339G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.45+92339G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.45+92339G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.186+80011G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000569455
  gene symbol: CDH13
  hgvsc: ENST00000569455.1:n.451-3545G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.45+92339G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.45+92339G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.45+92339G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*45+1G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-82891918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891918
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891918
    reference: chr 16
allele count: 1
allele frequency: 9.365049634763064e-6
allele num: 106780
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-49G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-49G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16133
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

16-82891918-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891918
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891917
    reference: chr 16
allele count: 1
allele frequency: 9.365049634763064e-6
allele num: 106780
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-48delC
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-48delC
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: GC
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

16-82891919-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891919
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891919
    reference: chr 16
allele count: 6
allele frequency: 5.603810591202018e-5
allele num: 107070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-48C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-48C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14159
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7341
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15505
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

16-82891921-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891921
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891921
    reference: chr 16
allele count: 1
allele frequency: 9.269902480625904e-6
allele num: 107876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-46A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-46A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5461
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

16-82891926-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891926
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891926
    reference: chr 16
allele count: 146
allele frequency: 1.349053814311058e-3
allele num: 108224
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-41A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-41A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 2.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 9375
  bin: 1.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 12691
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20389
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-82891926-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891926
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891926
    reference: chr 16
allele count: 2
allele frequency: 1.848018923713779e-5
allele num: 108224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-41A>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-41A>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20389
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/16-82891926-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891926
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891926
    reference: chr 16
allele count: 1
allele frequency: 9.240094618568895e-6
allele num: 108224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-41A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-41A>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9375
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

16-82891927-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891927
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891927
    reference: chr 16
allele count: 2111
allele frequency: 1.948243719659634e-2
allele num: 108354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-40T>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-40T>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12266
  bin: 1.25e1
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 8079
  bin: 2.75e1
  variant carriers: 327
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 8812
  bin: 1.75e1
  variant carriers: 500
genotype depth: GenotypeDepth
  all individuals: 5344
  bin: 7.5e0
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 3.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 21116
  bin: 2.25e1
  variant carriers: 477
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
num of homozygotes: 33
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

16-82891931-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891931
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891931
    reference: chr 16
allele count: 5
allele frequency: 4.604560356577154e-5
allele num: 108588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-36C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-36C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10649
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25365
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-82891932-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891932
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891932
    reference: chr 16
allele count: 11
allele frequency: 1.011252482165183e-4
allele num: 108776
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-35C>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-35C>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10001
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD

16-82891933-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891933
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891933
    reference: chr 16
allele count: 148
allele frequency: 1.358047348137273e-3
allele num: 108980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-34G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-34G>A
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28073
  bin: 2.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 9497
  bin: 2.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

16-82891933-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891933
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891933
    reference: chr 16
allele count: 1
allele frequency: 9.175995595522114e-6
allele num: 108980
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-34G>T
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-34G>T
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

16-82891938-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891938
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891938
    reference: chr 16
allele count: 1
allele frequency: 9.053378720938654e-6
allele num: 110456
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-29T>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-29T>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS

http://identifiers.org/exac.variant/16-82891940-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891940
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891940
    reference: chr 16
allele count: 3
allele frequency: 2.703823206013303e-5
allele num: 110954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-27A>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-27A>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10487
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

16-82891941-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891941
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891941
    reference: chr 16
allele count: 1
allele frequency: 8.991835413444593e-6
allele num: 111212
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-26A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-26A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

16-82891948-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891948
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891948
    reference: chr 16
allele count: 1
allele frequency: 8.844391771177896e-6
allele num: 113066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-19A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-19A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37098
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

16-82891950-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891950
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891950
    reference: chr 16
allele count: 2
allele frequency: 1.759695924544239e-5
allele num: 113656
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-17G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-17G>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

16-82891957-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891957
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891957
    reference: chr 16
allele count: 6
allele frequency: 5.198315745698393e-5
allele num: 115422
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-10G>C
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-10G>C
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38601
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

16-82891958-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891958
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891958
    reference: chr 16
allele count: 2
allele frequency: 1.730343300110742e-5
allele num: 115584
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-9T>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-9T>A
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum

16-82891965-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891965
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891965
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 116798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46-2A>G
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46-2A>G
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: splice acceptor
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39395
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.187-2A>G
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

16-82891967-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891967
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891967
    reference: chr 16
allele count: 1
allele frequency: 8.541752084187508e-6
allele num: 117072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000455781
  ensembl transcript: ENST00000562601
  gene symbol: CDH13
  hgvsc: ENST00000562601.1:c.*55G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.46G>A
  hgvsp: ENSP00000454435.1:p.Val16Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.46G>A
  hgvsp: ENSP00000388804.2:p.Val16Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.46G>A
  hgvsp: ENSP00000456491.1:p.Val16Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.46G>A
  hgvsp: ENSP00000442225.2:p.Val16Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000268613
  ensembl transcript: ENST00000268613
  gene symbol: CDH13
  hgvsc: ENST00000268613.10:c.187G>A
  hgvsp: ENSP00000268613.10:p.Val63Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.46G>A
  hgvsp: ENSP00000456297.1:p.Val16Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457149
  ensembl transcript: ENST00000568770
  gene symbol: CDH13
  hgvsc: ENST00000568770.1:c.*46G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000408632
  ensembl transcript: ENST00000431540
  gene symbol: CDH13
  hgvsc: ENST00000431540.3:c.46G>A
  hgvsp: ENSP00000408632.3:p.Val16Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl transcript: ENST00000566333
  gene symbol: CDH13
  hgvsc: ENST00000566333.1:n.168G>A
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.46G>A
  hgvsp: ENSP00000394557.3:p.Val16Met
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.46G>A
  hgvsp: ENSP00000457914.1:p.Val16Met
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val63Met
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

16-82891970-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 82891970
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 82891970
    reference: chr 16
allele count: 14
allele frequency: 1.191874819090429e-4
allele num: 117462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000454435
  ensembl transcript: ENST00000566620
  gene symbol: CDH13
  hgvsc: ENST00000566620.1:c.49C>T
  hgvsp: ENST00000566620.1:c.49C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000394557
  ensembl transcript: ENST00000428848
  gene symbol: CDH13
  hgvsc: ENST00000428848.3:c.49C>T
  hgvsp: ENST00000428848.3:c.49C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000442225
  ensembl transcript: ENST00000539548
  gene symbol: CDH13
  hgvsc: ENST00000539548.2:c.49C>T
  hgvsp: ENST00000539548.2:c.49C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000388804
  ensembl transcript: ENST00000446376
  gene symbol: CDH13
  hgvsc: ENST00000446376.2:c.49C>T
  hgvsp: ENST00000446376.2:c.49C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000457914
  ensembl transcript: ENST00000569144
  gene symbol: CDH13
  hgvsc: ENST00000569144.1:c.49C>T
  hgvsp: ENST00000569144.1:c.49C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456297
  ensembl transcript: ENST00000567445
  gene symbol: CDH13
  hgvsc: ENST00000567445.1:c.49C>T
  hgvsp: ENST00000567445.1:c.49C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140945
  ensembl protein: ENSP00000456491
  ensembl transcript: ENST00000565636
  gene symbol: CDH13
  hgvsc: ENST00000565636.1:c.49C>T
  hgvsp: ENST00000565636.1:c.49C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1753
canonical: true
consequence: synonymous
filter: PASS
hgvs: p.Leu64Leu
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 421
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.222972972972973e-4
allele num: 2368
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.16542e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.88e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.892e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.468e1

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.668801708033093e-4
allele num: 7494
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.371e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.85e-2

DP
type: SiteQuality
SIO_000300: 1.36686e5

FS
type: SiteQuality
SIO_000300: 5.835e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.07e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.61e-1

GenotypeDepth
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3355
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2612
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 7.575757575757576e-3
allele num: 132
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.531e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.25e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.29e-1

DP
type: SiteQuality
SIO_000300: 1.38108e5

FS
type: SiteQuality
SIO_000300: 1.826e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: -1.296e0

MQ
type: SiteQuality
SIO_000300: 5.902e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 1.16e1

GenotypeDepth
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332622601279318e-4
allele num: 7504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.02e0

FS
type: SiteQuality
SIO_000300: 1.2326e1

DP
type: SiteQuality
SIO_000300: 1.38177e5

MQRankSum
type: SiteQuality
SIO_000300: 2.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.24e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

QD
type: SiteQuality
SIO_000300: 1.119e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 726
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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Other
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 120
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 2724
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European (Finnish)
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allele frequency: NaN
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num of homozygotes: 0

African
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East Asian
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South Asian
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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FS
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MQRankSum
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ClippingRankSum
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DP
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 2722
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 3.996802557953637e-4
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European (Finnish)
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Other
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East Asian
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ClippingRankSum
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QD
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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SIO_000300: 4.52e-1

BaseQRankSum
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SIO_000300: -6.72e-1

GenotypeDepth
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variant carriers: 439

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5287

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 7501
allele frequency: 9.99333866240341e-1
allele num: 7506
num of homozygotes: 3748

Latino
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allele count: 92
allele frequency: 1.0e0
allele num: 92
num of homozygotes: 46

European (Finnish)
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allele frequency: 1.0e0
allele num: 2
num of homozygotes: 1

East Asian
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allele count: 132
allele frequency: 1.0e0
allele num: 132
num of homozygotes: 66

African
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allele frequency: 8.398058252427184e-1
allele num: 206
num of homozygotes: 74

Other
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allele count: 122
allele frequency: 1.0e0
allele num: 122
num of homozygotes: 61

European (Non-Finnish)
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allele count: 2744
allele frequency: 9.978181818181818e-1
allele num: 2750
num of homozygotes: 1369

MQRankSum
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SIO_000300: 4.33e-1

FS
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ClippingRankSum
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QD
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 5.973e1

BaseQRankSum
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SIO_000300: 1.05e0

DP
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SIO_000300: 3.90437e5

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 2716
num of homozygotes: 0

InbreedingCoeff
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QD
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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FS
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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Latino
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African
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East Asian
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European (Finnish)
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QD
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InbreedingCoeff
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DP
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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South Asian
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Latino
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European (Non-Finnish)
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African
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DP
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FS
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Latino
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele frequency: 8.163265306122448e-2
allele num: 196
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.86150409530901e-3
allele num: 2686
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -3.23e-2

DP
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FS
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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MQRankSum
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SIO_000300: -1.7e-2

ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 4.013914905004014e-4
allele num: 7474
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele num: 0
num of homozygotes: 0

Latino
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allele count: 0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.492537313432836e-3
allele num: 2680
num of homozygotes: 0

MQRankSum
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SIO_000300: 3.03e-1

BaseQRankSum
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FS
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ReadPosRankSum
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DP
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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SIO_000300: 9.9e-2

QD
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MQ
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SIO_000300: 5.969e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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African
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allele frequency: 3.608247422680412e-2
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

VQSLOD
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SIO_000300: 3.92e0

InbreedingCoeff
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DP
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MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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SIO_000300: -2.499e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
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allele frequency: 8.771929824561403e-3
allele num: 114
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 90
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European (Non-Finnish)
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allele count: 8
allele frequency: 3.034901365705615e-3
allele num: 2636
num of homozygotes: 0

VQSLOD
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MQ
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Non-Finnish)
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allele frequency: NaN
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Latino
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South Asian
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European (Finnish)
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InbreedingCoeff
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MQ
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FS
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DP
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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Other
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FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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African
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DP
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FS
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FS
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MQ
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European (Non-Finnish)
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African
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VQSLOD
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DP
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African
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Finnish)
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DP
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FS
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QD
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VQSLOD
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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VQSLOD
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MQRankSum
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InbreedingCoeff
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MQ
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Other
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African
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East Asian
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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VQSLOD
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FS
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QD
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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QD
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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Other
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European (Finnish)
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Latino
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East Asian
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MQRankSum
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DP
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MQ
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QD
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BaseQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Other
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South Asian
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East Asian
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Latino
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QD
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MQ
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ReadPosRankSum
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FS
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VQSLOD
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MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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South Asian
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East Asian
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FS
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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QD
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DP
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VQSLOD
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5308
bin: 3.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 1.2465719272002e-4
allele num: 8022
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14314
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.747e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 0.0e0

QD
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DP
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SIO_000300: 1.135449e6

VQSLOD
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MQRankSum
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SIO_000300: 6.55e-1

InbreedingCoeff
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SIO_000300: 7.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

BaseQRankSum
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SIO_000300: -1.86e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6130
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

East Asian
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allele count: 6
allele frequency: 7.753941586973378e-4
allele num: 7738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8026
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59856
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -3.123e0

VQSLOD
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SIO_000300: -1.188e-1

MQRankSum
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ClippingRankSum
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SIO_000300: -8.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.138356e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3509
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GenotypeQuality
all individuals: 256
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.660026560424967e-5
allele num: 60240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -7.36e-1

InbreedingCoeff
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SIO_000300: 1.9e-3

MQRankSum
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MQ
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SIO_000300: 6.0e1

QD
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DP
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FS
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BaseQRankSum
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SIO_000300: 1.75e0

VQSLOD
type: SiteQuality
SIO_000300: -5.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeDepth
all individuals: 241
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variant carriers: 4

GenotypeDepth
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 160

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22888
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variant carriers: 0

GenotypeQuality
all individuals: 2856
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 6
allele frequency: 5.787037037037037e-4
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

African
type: Population
allele count: 139
allele frequency: 1.714356191415885e-2
allele num: 8108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.654916757687088e-5
allele num: 60426
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.291e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.193e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.54e-2

DP
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SIO_000300: 1.176133e6

QD
type: SiteQuality
SIO_000300: 2.162e1

MQRankSum
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SIO_000300: 2.06e-1

MQ
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SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1831
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GenotypeQuality
all individuals: 3414
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.374759417102007e-4
allele num: 14548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.54e-2

MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: 1.51e-1

FS
type: SiteQuality
SIO_000300: 1.291e0

ReadPosRankSum
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SIO_000300: 2.81e-1

MQRankSum
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DP
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SIO_000300: 1.176133e6

BaseQRankSum
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SIO_000300: -2.193e0

QD
type: SiteQuality
SIO_000300: 2.162e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4077
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.873797085510036e-5
allele num: 14548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60426
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.291e0

DP
type: SiteQuality
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BaseQRankSum
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.54e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeDepth
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variant carriers: 9

GenotypeDepth
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 11

GenotypeQuality
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GenotypeQuality
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variant carriers: 2032

GenotypeQuality
all individuals: 239
bin: 9.25e1
variant carriers: 14

GenotypeQuality
all individuals: 568
bin: 5.75e1
variant carriers: 8

European (Non-Finnish)
type: Population
allele count: 1786
allele frequency: 2.950700502246894e-2
allele num: 60528
num of homozygotes: 31

South Asian
type: Population
allele count: 63
allele frequency: 4.320395007543547e-3
allele num: 14582
num of homozygotes: 1

Other
type: Population
allele count: 13
allele frequency: 1.653944020356234e-2
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 43
allele frequency: 5.298176441596846e-3
allele num: 8116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 156
allele frequency: 2.529182879377432e-2
allele num: 6168
num of homozygotes: 1

Latino
type: Population
allele count: 50
allele frequency: 4.835589941972921e-3
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.52e1

MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 9.599999999999999e-3

FS
type: SiteQuality
SIO_000300: 9.208e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 752
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GenotypeQuality
all individuals: 4563
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GenotypeQuality
all individuals: 1939
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6186
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60704
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.372673973999491e-4
allele num: 7846
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

DP
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SIO_000300: 1.214906e6

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
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SIO_000300: 9.86e-1

FS
type: SiteQuality
SIO_000300: 3.315e0

BaseQRankSum
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SIO_000300: -2.57e0

QD
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SIO_000300: 1.304e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.614987080103359e-4
allele num: 6192
num of homozygotes: 0

East Asian
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allele count: 4
allele frequency: 5.095541401273885e-4
allele num: 7850
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14584
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 9.865824782951855e-5
allele num: 60816
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

InbreedingCoeff
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SIO_000300: 3.1e-3

ReadPosRankSum
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SIO_000300: -2.15e-1

BaseQRankSum
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SIO_000300: 4.82e-1

ClippingRankSum
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FS
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DP
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SIO_000300: 1.228903e6

MQ
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SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.571e1

VQSLOD
type: SiteQuality
SIO_000300: 2.81e0

GenotypeDepth
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variant carriers: 7

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 158

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7864
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.773672055427252e-4
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 141
allele frequency: 1.72963689892051e-2
allele num: 8152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.641874363773684e-5
allele num: 60906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.075e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

VQSLOD
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SIO_000300: 1.76e0

DP
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SIO_000300: 1.247146e6

MQRankSum
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SIO_000300: 1.77e-1

InbreedingCoeff
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SIO_000300: 1.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

QD
type: SiteQuality
SIO_000300: 1.915e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3667
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14674
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60906
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.612903225806452e-4
allele num: 6200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

VQSLOD
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SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 2.88e0

DP
type: SiteQuality
SIO_000300: 1.247146e6

InbreedingCoeff
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SIO_000300: 1.1e-2

MQRankSum
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SIO_000300: 1.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

FS
type: SiteQuality
SIO_000300: 1.075e0

QD
type: SiteQuality
SIO_000300: 1.915e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61762
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.603077909586406e-4
allele num: 6238
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: -7.165e-1

ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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DP
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MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8026
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6250
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South Asian
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allele count: 3
allele frequency: 2.007494646680942e-4
allele num: 14944
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62064
num of homozygotes: 0

Latino
type: Population
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num of homozygotes: 0

Other
type: Population
allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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FS
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QD
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.608337622233659e-5
allele num: 62176
num of homozygotes: 0

Other
type: Population
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1243
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 263
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43843
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4397
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.568575932737782e-5
allele num: 15224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63232
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.79e-1

DP
type: SiteQuality
SIO_000300: 1.362439e6

VQSLOD
type: SiteQuality
SIO_000300: 5.580000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

GenotypeDepth
all individuals: 72
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44566
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4469
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.340823970037453e-4
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.724e1

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.822e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.599999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.42e-1

FS
type: SiteQuality
SIO_000300: 1.187e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.373069e6

GenotypeDepth
all individuals: 606
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 198
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46476
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4703
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 9.75e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15674
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.090522335145356e-4
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8674
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.411e-1

QD
type: SiteQuality
SIO_000300: 1.625e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.403716e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 73
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46784
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15702
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.302025782688766e-4
allele num: 8688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10924
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.406267e6

VQSLOD
type: SiteQuality
SIO_000300: -8.158e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.648e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeDepth
all individuals: 19
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47921
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4824
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15968
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 7.33e0

MQRankSum
type: SiteQuality
SIO_000300: 4.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.073e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -9.395e-1

FS
type: SiteQuality
SIO_000300: 2.307e0

DP
type: SiteQuality
SIO_000300: 1.42507e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.78e-1

GenotypeDepth
all individuals: 72
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 374
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 614
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4866
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1869
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48191
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11084
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169590643274854e-4
allele num: 8550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.428082e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.11e0

MQRankSum
type: SiteQuality
SIO_000300: 8.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

FS
type: SiteQuality
SIO_000300: 1.651e0

QD
type: SiteQuality
SIO_000300: 8.74e0