http://identifiers.org/exac.variant/16-2983913-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983913
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983913
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 29566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.116C>A
  hgvsp: ENSP00000461566.1:p.Asp39Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.734C>A
  hgvsp: ENSP00000458661.1:p.Asp245Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1446C>A
  hgvsp: ENSP00000253928.9:p.Asp482Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1446C>A
  hgvsp: ENSP00000382575.2:p.Asp482Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1443C>A
  hgvsp: ENSP00000399938.2:p.Asp481Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.631C>A
  hgvsp: ENSP00000344122.5:p.Asp211Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.111C>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18003
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25990
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18055
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6076
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24433
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp481Glu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/16-2983914-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983914
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983914
    reference: chr 16
allele count: 1
allele frequency: 3.38409475465313e-5
allele num: 29550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.735C>A
  hgvsp: ENSP00000458661.1:p.Leu246Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1447C>A
  hgvsp: ENSP00000253928.9:p.Leu483Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.117C>A
  hgvsp: ENSP00000461566.1:p.Leu40Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1444C>A
  hgvsp: ENSP00000399938.2:p.Leu482Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.632C>A
  hgvsp: ENSP00000344122.5:p.Leu212Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1447C>A
  hgvsp: ENSP00000382575.2:p.Leu483Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.112C>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18028
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25004
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3641
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu482Met
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

16-2983918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983918
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983918
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 27958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.121G>A
  hgvsp: ENSP00000461566.1:p.Gly41Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1451G>A
  hgvsp: ENSP00000382575.2:p.Gly484Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1451G>A
  hgvsp: ENSP00000253928.9:p.Gly484Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.739G>A
  hgvsp: ENSP00000458661.1:p.Gly247Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.116G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1448G>A
  hgvsp: ENSP00000399938.2:p.Gly483Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.636G>A
  hgvsp: ENSP00000344122.5:p.Gly213Glu
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25415
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19370
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6007
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3753
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly483Glu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-2983928-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983928
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983928
    reference: chr 16
allele count: 2
allele frequency: 7.697636825494573e-5
allele num: 25982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.646G>A
  hgvsp: ENST00000344592.5:c.646G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1461G>A
  hgvsp: ENST00000399667.2:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1458G>A
  hgvsp: ENST00000416288.2:c.1458G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.131G>A
  hgvsp: ENST00000571580.1:c.131G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.749G>A
  hgvsp: ENST00000573564.1:c.749G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1461G>A
  hgvsp: ENST00000253928.9:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.126G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21569
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5874
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23726
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu486Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/16-2983932-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983932
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983932
    reference: chr 16
allele count: 1
allele frequency: 4.027061855670103e-5
allele num: 24832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1465C>A
  hgvsp: ENSP00000253928.9:p.Leu489Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.130C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1465C>A
  hgvsp: ENSP00000382575.2:p.Leu489Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.135C>A
  hgvsp: ENSP00000461566.1:p.Leu46Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.753C>A
  hgvsp: ENSP00000458661.1:p.Leu252Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1462C>A
  hgvsp: ENSP00000399938.2:p.Leu488Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.650C>A
  hgvsp: ENSP00000344122.5:p.Leu218Met
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23028
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23086
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu488Met
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum

16-2983938-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983938
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983938
    reference: chr 16
allele count: 1
allele frequency: 4.308859014133058e-5
allele num: 23208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.656C>G
  hgvsp: ENSP00000344122.5:p.Gln220Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1468C>G
  hgvsp: ENSP00000399938.2:p.Gln490Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1471C>G
  hgvsp: ENSP00000382575.2:p.Gln491Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.759C>G
  hgvsp: ENSP00000458661.1:p.Gln254Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.136C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1471C>G
  hgvsp: ENSP00000253928.9:p.Gln491Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.141C>G
  hgvsp: ENSP00000461566.1:p.Gln48Glu
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24819
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21656
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24955
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5348
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln490Glu
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

16-2983941-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983941
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983941
    reference: chr 16
allele count: 4
allele frequency: 1.851337591409794e-4
allele num: 21606
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1471C>G
  hgvsp: ENSP00000399938.2:p.Arg491Gly
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.144C>G
  hgvsp: ENSP00000461566.1:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1474C>G
  hgvsp: ENSP00000382575.2:p.Arg492Gly
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.659C>G
  hgvsp: ENSP00000344122.5:p.Arg221Gly
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.762C>G
  hgvsp: ENSP00000458661.1:p.Arg255Gly
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.139C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1474C>G
  hgvsp: ENSP00000253928.9:p.Arg492Gly
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18736
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2820
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg491Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

16-2983941-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983941
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983941
    reference: chr 16
allele count: 1
allele frequency: 4.628343978524484e-5
allele num: 21606
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1471C>T
  hgvsp: ENSP00000399938.2:p.Arg491Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.659C>T
  hgvsp: ENSP00000344122.5:p.Arg221Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1474C>T
  hgvsp: ENSP00000382575.2:p.Arg492Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.139C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1474C>T
  hgvsp: ENSP00000253928.9:p.Arg492Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.762C>T
  hgvsp: ENSP00000458661.1:p.Arg255Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.144C>T
  hgvsp: ENSP00000461566.1:p.Arg49Trp
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20397
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26396
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18736
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2820
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Arg491Trp
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

16-2983942-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983942
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983942
    reference: chr 16
allele count: 2
allele frequency: 9.264406151565684e-5
allele num: 21588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1475G>A
  hgvsp: ENSP00000253928.9:p.Arg492Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.140G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.763G>A
  hgvsp: ENSP00000458661.1:p.Arg255Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.145G>A
  hgvsp: ENSP00000461566.1:p.Arg49Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1475G>A
  hgvsp: ENSP00000382575.2:p.Arg492Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1472G>A
  hgvsp: ENSP00000399938.2:p.Arg491Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.660G>A
  hgvsp: ENSP00000344122.5:p.Arg221Gln
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg491Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

16-2983950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983950
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983950
    reference: chr 16
allele count: 4
allele frequency: 2.169668040789759e-4
allele num: 18436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1483C>T
  hgvsp: ENSP00000253928.9:p.Arg495Cys
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1480C>T
  hgvsp: ENSP00000399938.2:p.Arg494Cys
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.148C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1483C>T
  hgvsp: ENSP00000382575.2:p.Arg495Cys
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.153C>T
  hgvsp: ENSP00000461566.1:p.Arg52Cys
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.771C>T
  hgvsp: ENSP00000458661.1:p.Arg258Cys
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.668C>T
  hgvsp: ENSP00000344122.5:p.Arg224Cys
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17671
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29646
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg494Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

16-2983957-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983957
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983957
    reference: chr 16
allele count: 2
allele frequency: 1.235177865612648e-4
allele num: 16192
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1487A>T
  hgvsp: ENSP00000399938.2:p.Asn496Ile
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1490A>T
  hgvsp: ENSP00000253928.9:p.Asn497Ile
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.155A>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.675A>T
  hgvsp: ENSP00000344122.5:p.Asn226Ile
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1490A>T
  hgvsp: ENSP00000382575.2:p.Asn497Ile
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.160A>T
  hgvsp: ENSP00000461566.1:p.Asn54Ile
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.778A>T
  hgvsp: ENSP00000458661.1:p.Asn260Ile
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16122
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2833
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31294
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn496Ile
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-2983957-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983957
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983957
    reference: chr 16
allele count: 1
allele frequency: 6.175889328063241e-5
allele num: 16192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.778A>C
  hgvsp: ENSP00000458661.1:p.Asn260Thr
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1490A>C
  hgvsp: ENSP00000382575.2:p.Asn497Thr
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.675A>C
  hgvsp: ENSP00000344122.5:p.Asn226Thr
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.155A>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1490A>C
  hgvsp: ENSP00000253928.9:p.Asn497Thr
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1487A>C
  hgvsp: ENSP00000399938.2:p.Asn496Thr
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.160A>C
  hgvsp: ENSP00000461566.1:p.Asn54Thr
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14829
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn496Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

16-2983960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983960
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983960
    reference: chr 16
allele count: 81
allele frequency: 5.734919286321156e-3
allele num: 14124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1493C>T
  hgvsp: ENSP00000382575.2:p.Thr498Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.781C>T
  hgvsp: ENSP00000458661.1:p.Thr261Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1490C>T
  hgvsp: ENSP00000399938.2:p.Thr497Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.158C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.163C>T
  hgvsp: ENSP00000461566.1:p.Thr55Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1493C>T
  hgvsp: ENSP00000253928.9:p.Thr498Met
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.678C>T
  hgvsp: ENSP00000344122.5:p.Thr227Met
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15160
  bin: 7.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 32678
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1799
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13187
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 3
hgvs: p.Thr497Met
num of homozygotes: 3
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum

16-2983961-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983961
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983961
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 13284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.159G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1491G>A
  hgvsp: ENST00000416288.2:c.1491G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1494G>A
  hgvsp: ENST00000253928.9:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.679G>A
  hgvsp: ENST00000344592.5:c.679G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.164G>A
  hgvsp: ENST00000571580.1:c.164G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.782G>A
  hgvsp: ENST00000573564.1:c.782G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1494G>A
  hgvsp: ENST00000399667.2:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14786
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Thr497Thr
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-2983963-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983963
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983963
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 13150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1496C>A
  hgvsp: ENSP00000253928.9:p.Ala499Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1496C>A
  hgvsp: ENSP00000382575.2:p.Ala499Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1493C>A
  hgvsp: ENSP00000399938.2:p.Ala498Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.166C>A
  hgvsp: ENSP00000461566.1:p.Ala56Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.784C>A
  hgvsp: ENSP00000458661.1:p.Ala262Glu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.161C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.681C>A
  hgvsp: ENSP00000344122.5:p.Ala228Glu
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14743
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32195
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala498Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-2983963-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983963
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983963
    reference: chr 16
allele count: 8
allele frequency: 6.083650190114068e-4
allele num: 13150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.681C>T
  hgvsp: ENSP00000344122.5:p.Ala228Val
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1493C>T
  hgvsp: ENSP00000399938.2:p.Ala498Val
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1496C>T
  hgvsp: ENSP00000253928.9:p.Ala499Val
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.166C>T
  hgvsp: ENSP00000461566.1:p.Ala56Val
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.784C>T
  hgvsp: ENSP00000458661.1:p.Ala262Val
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1496C>T
  hgvsp: ENSP00000382575.2:p.Ala499Val
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.161C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14743
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32195
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala498Val
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

16-2983964-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983964
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983964
    reference: chr 16
allele count: 4
allele frequency: 3.134796238244514e-4
allele num: 12760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.167G>A
  hgvsp: ENST00000571580.1:c.167G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1497G>A
  hgvsp: ENST00000253928.9:c.1497G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.785G>A
  hgvsp: ENST00000573564.1:c.785G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1494G>A
  hgvsp: ENST00000416288.2:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.162G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1497G>A
  hgvsp: ENST00000399667.2:c.1497G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.682G>A
  hgvsp: ENST00000344592.5:c.682G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14518
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12859
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Ala498Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-2983968-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983968
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983968
    reference: chr 16
allele count: 11
allele frequency: 9.823182711198428e-4
allele num: 11198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.789C>T
  hgvsp: ENSP00000458661.1:p.Arg264Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1501C>T
  hgvsp: ENSP00000382575.2:p.Arg501Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.686C>T
  hgvsp: ENSP00000344122.5:p.Arg230Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1501C>T
  hgvsp: ENSP00000253928.9:p.Arg501Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1498C>T
  hgvsp: ENSP00000399938.2:p.Arg500Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.166C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.171C>T
  hgvsp: ENSP00000461566.1:p.Arg58Trp
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13683
  bin: 7.5e0
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 34216
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32563
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11791
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Arg500Trp
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

16-2983969-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983969
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983969
    reference: chr 16
allele count: 2
allele frequency: 1.77367860943597e-4
allele num: 11276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1502G>A
  hgvsp: ENSP00000253928.9:p.Arg501Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1502G>A
  hgvsp: ENSP00000382575.2:p.Arg501Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1499G>A
  hgvsp: ENSP00000399938.2:p.Arg500Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.687G>A
  hgvsp: ENSP00000344122.5:p.Arg230Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.167G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.790G>A
  hgvsp: ENSP00000458661.1:p.Arg264Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.172G>A
  hgvsp: ENSP00000461566.1:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32944
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12286
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg500Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

16-2983969-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983969
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983969
    reference: chr 16
allele count: 1
allele frequency: 8.868393047179851e-5
allele num: 11276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.167G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.687G>C
  hgvsp: ENSP00000344122.5:p.Arg230Pro
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1499G>C
  hgvsp: ENSP00000399938.2:p.Arg500Pro
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1502G>C
  hgvsp: ENSP00000382575.2:p.Arg501Pro
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.790G>C
  hgvsp: ENSP00000458661.1:p.Arg264Pro
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.172G>C
  hgvsp: ENSP00000461566.1:p.Arg58Pro
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1502G>C
  hgvsp: ENSP00000253928.9:p.Arg501Pro
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13647
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34394
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32944
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg500Pro
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

16-2983970-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983970
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983970
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 10416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1503G>A
  hgvsp: ENST00000253928.9:c.1503G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1500G>A
  hgvsp: ENST00000416288.2:c.1500G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.791G>A
  hgvsp: ENST00000573564.1:c.791G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.168G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1503G>A
  hgvsp: ENST00000399667.2:c.1503G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.688G>A
  hgvsp: ENST00000344592.5:c.688G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.173G>A
  hgvsp: ENST00000571580.1:c.173G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34697
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32777
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg500Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

16-2983984-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983984
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983984
    reference: chr 16
allele count: 1
allele frequency: 1.267748478701826e-4
allele num: 7888
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.183+4C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.698+4C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+4C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.178+4C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+4C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1513+4C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+4C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10909
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3054
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36420
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2585
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9727
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1510+4C>G
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

16-2983985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983985
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983985
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 7662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1513+5C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.698+5C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+5C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.178+5C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+5C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.183+5C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+5C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36528
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10757
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2634
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9508
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1510+5C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff

16-2983987-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983987
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983987
    reference: chr 16
allele count: 1
allele frequency: 1.360914534567229e-4
allele num: 7348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.698+7G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+7G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1513+7G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.178+7G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+7G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+7G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.183+7G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2744
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1510+7G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

16-2983995-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2983995
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2983995
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 5374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+15G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.178+15G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.183+15G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1513+15G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.698+15G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+15G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+15G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37321
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4186
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6536
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33523
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

16-2984007-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984007
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984007
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 4162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+27G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.178+27G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1513+27G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.183+27G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+27G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.698+27G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+27G>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37874
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8388
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4838
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

16-2984008-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984008
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984008
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 4102
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1513+28C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.183+28C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+28C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+28C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+28C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.698+28C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.178+28C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37938
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4811
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

16-2984011-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984011
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984011
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 3816
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.698+31C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+31C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.178+31C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1513+31C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.183+31C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+31C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+31C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37845
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8229
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32600
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4756
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-2984574-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984574
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984574
    reference: chr 16
allele count: 1
allele frequency: 7.312079555425563e-5
allele num: 13676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+594C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.699-42C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1514-42C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+594C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.179-42C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-172C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+594C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 807
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genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 2099
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genotype quality: GenotypeQuality
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

16-2984579-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984579
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984579
    reference: chr 16
allele count: 1
allele frequency: 7.289692374981776e-5
allele num: 13718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+599C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-167C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.179-37C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+599C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.699-37C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+599C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1514-37C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/16-2984583-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984583
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984583
    reference: chr 16
allele count: 4
allele frequency: 2.895193977996526e-4
allele num: 13816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+603C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1514-33C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.699-33C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.179-33C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+603C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-163C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+603C>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-2984607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984607
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984607
    reference: chr 16
allele count: 6
allele frequency: 4.268032437046522e-4
allele num: 14058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1514-9C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.699-9C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.179-9C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+627C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+627C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+627C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-139C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5683
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

16-2984608-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984608
    reference: chr 16
allele count: 38
allele frequency: 2.69694819020582e-3
allele num: 14090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+628G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+628G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-138G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1514-8G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.699-8G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.179-8G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+628G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5774
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.75e1
  variant carriers: 37
hgvs: c.699-8G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

16-2984616-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984616
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984616
    reference: chr 16
allele count: 2
allele frequency: 1.409840688002256e-4
allele num: 14186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-130G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+636G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+636G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+636G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.699G>C
  hgvsp: ENSP00000344122.5:p.Gly234Ala
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1514G>C
  hgvsp: ENSP00000382575.2:p.Gly505Ala
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.179G>C
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly234Ala
num of homozygotes: 1
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP

16-2984618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984618
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984618
    reference: chr 16
allele count: 1
allele frequency: 7.038288288288288e-5
allele num: 14208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1516G>A
  hgvsp: ENSP00000382575.2:p.Ala506Thr
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+638G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-128G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.181G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.701G>A
  hgvsp: ENSP00000344122.5:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+638G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+638G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6002
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala235Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

16-2984618-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984618
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984618
    reference: chr 16
allele count: 1
allele frequency: 7.038288288288288e-5
allele num: 14208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+638G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1516G>C
  hgvsp: ENSP00000382575.2:p.Ala506Pro
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.701G>C
  hgvsp: ENSP00000344122.5:p.Ala235Pro
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.181G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+638G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+638G>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-128G>C
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6002
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala235Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

16-2984619-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984619
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984619
    reference: chr 16
allele count: 1
allele frequency: 7.034327518289252e-5
allele num: 14216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.182C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-127C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+639C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.702C>G
  hgvsp: ENSP00000344122.5:p.Ala235Gly
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1517C>G
  hgvsp: ENSP00000382575.2:p.Ala506Gly
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+639C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+639C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala235Gly
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-2984620-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984620
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984621
    reference: chr 16
allele count: 2
allele frequency: 1.401148942132549e-4
allele num: 14274
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.705dupG
  hgvsp: ENSP00000344122.5:p.Leu237ProfsTer46
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-124dupG
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+642dupG
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.185dupG
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+642dupG
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+642dupG
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1520dupG
  hgvsp: ENSP00000382575.2:p.Leu508ProfsTer46
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu237ProfsTer46
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

16-2984623-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984623
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984621
    reference: chr 16
allele count: 1
allele frequency: 6.987143655673561e-5
allele num: 14312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+648_801+649delCT
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.191_192delCT
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.711_712delCT
  hgvsp: ENSP00000344122.5:p.Ser238PhefsTer44
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+648_1510+649delCT
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1526_1527delCT
  hgvsp: ENSP00000382575.2:p.Ser509PhefsTer44
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+648_1513+649delCT
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-118_184-117delCT
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2007
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser238PhefsTer44
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: CCT
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

16-2984624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984624
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984624
    reference: chr 16
allele count: 2
allele frequency: 1.395478649176668e-4
allele num: 14332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+644C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+644C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.187C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1522C>T
  hgvsp: ENSP00000382575.2:p.Leu508Phe
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.707C>T
  hgvsp: ENSP00000344122.5:p.Leu237Phe
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+644C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-122C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6069
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu237Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

16-2984632-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984632
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984632
    reference: chr 16
allele count: 1
allele frequency: 6.959910913140311e-5
allele num: 14368
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+652C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-114C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+652C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1530C>G
  hgvsp: ENSP00000382575.2:p.Phe510Leu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.715C>G
  hgvsp: ENSP00000344122.5:p.Phe239Leu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+652C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.195C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6129
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe239Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

16-2984634-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984634
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984634
    reference: chr 16
allele count: 2
allele frequency: 1.391207568169171e-4
allele num: 14376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.717A>G
  hgvsp: ENSP00000344122.5:p.Gln240Arg
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-112A>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+654A>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1532A>G
  hgvsp: ENSP00000382575.2:p.Gln511Arg
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.197A>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+654A>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+654A>G
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln240Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-2984639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984639
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984639
    reference: chr 16
allele count: 1
allele frequency: 6.971556051310653e-5
allele num: 14344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1537C>T
  hgvsp: ENSP00000382575.2:p.Leu513Phe
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-107C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.202C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+659C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.722C>T
  hgvsp: ENSP00000344122.5:p.Leu242Phe
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+659C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+659C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu242Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

16-2984645-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984645
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984645
    reference: chr 16
allele count: 4
allele frequency: 2.791346824842987e-4
allele num: 14330
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+665C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+665C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.208C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1543C>T
  hgvsp: ENSP00000382575.2:p.Arg515Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+665C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.728C>T
  hgvsp: ENSP00000344122.5:p.Arg244Trp
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-101C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg244Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

16-2984646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984646
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984646
    reference: chr 16
allele count: 7
allele frequency: 4.890317171999441e-4
allele num: 14314
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+666G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-100G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1544G>A
  hgvsp: ENSP00000382575.2:p.Arg515Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.729G>A
  hgvsp: ENSP00000344122.5:p.Arg244Gln
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+666G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+666G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.209G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6126
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg244Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD

16-2984651-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984651
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984651
    reference: chr 16
allele count: 1
allele frequency: 6.981290142418318e-5
allele num: 14324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.734C>T
  hgvsp: ENST00000344592.5:c.734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+671C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.214C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1549C>T
  hgvsp: ENST00000399667.2:c.1549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+671C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+671C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-95C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu246Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

16-2984672-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984672
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984672
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 14198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+692A>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-74A>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+692A>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+4A>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+4A>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+4A>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+692A>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6052
  bin: 6.25e1
  variant carriers: 0
hgvs: c.751+4A>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

16-2984677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984677
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984677
    reference: chr 16
allele count: 1
allele frequency: 7.088176920895946e-5
allele num: 14108
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+697C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+9C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+9C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+9C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-69C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+697C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+697C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5880
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1794
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-2984691-AGTTCTCTCG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984691
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984682
    reference: chr 16
allele count: 1
allele frequency: 7.269555103227682e-5
allele num: 13756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1929
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: AGTTCTCTCG
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

16-2984698-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984698
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984698
    reference: chr 16
allele count: 1
allele frequency: 7.432733759476735e-5
allele num: 13454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+30T>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+30T>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+718T>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+30T>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-48T>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+718T>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+718T>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1998
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

16-2984699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984699
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984699
    reference: chr 16
allele count: 1
allele frequency: 7.500750075007501e-5
allele num: 13332
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+719C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-47C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+31C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+31C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+719C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+719C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+31C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5161
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

16-2984706-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984706
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984706
    reference: chr 16
allele count: 1
allele frequency: 7.881462799495586e-5
allele num: 12688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+726G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+38G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+38G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-40G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+726G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+38G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+726G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1719
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum

16-2984710-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984710
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984710
    reference: chr 16
allele count: 2
allele frequency: 1.612123166209898e-4
allele num: 12406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+42G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+730G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+730G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-36G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+42G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+730G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+42G>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

16-2984711-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984711
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984711
    reference: chr 16
allele count: 2
allele frequency: 1.640689089417555e-4
allele num: 12190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+731C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+43C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+43C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+731C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+43C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-35C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+731C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2081
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

16-2984725-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984725
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984725
    reference: chr 16
allele count: 1
allele frequency: 9.023641941887746e-5
allele num: 11082
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-21C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+745C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+57C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+57C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+745C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+57C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+745C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 183
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genotype quality: GenotypeQuality
  all individuals: 264
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genotype quality: GenotypeQuality
  all individuals: 2999
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genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-2984732-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984732
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984732
    reference: chr 16
allele count: 1
allele frequency: 9.606147934678194e-5
allele num: 10410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-14T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+752T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+64T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+752T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+64T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+752T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+64T>C
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
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genotype quality: GenotypeQuality
  all individuals: 339
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 10
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 256
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

16-2984743-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984743
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984743
    reference: chr 16
allele count: 1
allele frequency: 1.112594570538496e-4
allele num: 8988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+75C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.184-3C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+763C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+763C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+75C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+763C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+75C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
hgvs: c.184-3C>T
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

16-2984766-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984766
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984766
    reference: chr 16
allele count: 5
allele frequency: 9.012256669069935e-4
allele num: 5548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+98C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+98C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.204C>T
  hgvsp: ENSP00000461566.1:p.Pro69Ser
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+786C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+786C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+786C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+98C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4474
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro69Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

16-2984768-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984768
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984768
    reference: chr 16
allele count: 10
allele frequency: 1.838235294117647e-3
allele num: 5440
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+788C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.206C>T
  hgvsp: ENST00000571580.1:c.206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+788C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+100C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+100C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+788C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+100C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3874
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro69Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

16-2984774-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984774
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984774
    reference: chr 16
allele count: 65
allele frequency: 1.366694701429773e-2
allele num: 4756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+794G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+794G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+106G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+106G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+794G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+106G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.212G>A
  hgvsp: ENST00000571580.1:c.212G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 7.5e0
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3737
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5045
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 1
hgvs: p.Ser71Ser
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

16-2984785-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984785
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984785
    reference: chr 16
allele count: 2
allele frequency: 6.297229219143577e-4
allele num: 3176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+117C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+117C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+805C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+805C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+805C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+117C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.223C>T
  hgvsp: ENSP00000461566.1:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5920
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2843
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro75Leu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

16-2984796-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984796
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984796
    reference: chr 16
allele count: 1
allele frequency: 4.385964912280702e-4
allele num: 2280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.234C>G
  hgvsp: ENSP00000461566.1:p.Pro79Ala
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+816C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+128C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+816C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+128C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+816C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+128C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6491
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro79Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-2984810-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984810
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984810
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 1574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+142G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+142G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.239+9G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+830G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+830G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+142G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+830G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP

16-2984844-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2984844
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2984844
    reference: chr 16
allele count: 15
allele frequency: 1.348920863309352e-2
allele num: 1112
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1566+176C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1510+864C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.239+43C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.231+176C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.751+176C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1513+864C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.801+864C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7081
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5034
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

16-2986289-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2986289
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2986289
    reference: chr 16
allele count: 1750
allele frequency: 3.589007383100902e-1
allele num: 4876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.232-833C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1567-44C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.802-833C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1514-833C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1511-833C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.240-385C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000570752
  gene symbol: FLYWCH1
  hgvsc: ENST00000570752.1:n.1408C>G
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.752-44C>G
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.25e1
  variant carriers: 813
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 14548
  bin: 2.5e0
  variant carriers: 764
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 7.5e0
  variant carriers: 1433
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 172
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 213
genotype quality: GenotypeQuality
  all individuals: 6737
  bin: 2.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.75e1
  variant carriers: 140
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.75e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 1.25e1
  variant carriers: 208
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 1234
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.75e1
  variant carriers: 79
num of homozygotes: 332
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/16-2986293-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2986293
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2986293
    reference: chr 16
allele count: 2
allele frequency: 4.04040404040404e-4
allele num: 4950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.240-381C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000570752
  gene symbol: FLYWCH1
  hgvsc: ENST00000570752.1:n.1412C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.752-40C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1514-829C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.802-829C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1511-829C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.232-829C>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1567-40C>A
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16837
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4391
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12274
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

16-2986302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2986302
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2986302
    reference: chr 16
allele count: 1
allele frequency: 1.914241960183767e-4
allele num: 5224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.232-820G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000570752
  gene symbol: FLYWCH1
  hgvsc: ENST00000570752.1:n.1421G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1514-820G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1511-820G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.752-31G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.240-372G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1567-31G>A
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.802-820G>A
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17166
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13665
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3059
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

16-2986323-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2986323
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2986323
    reference: chr 16
allele count: 6103
allele frequency: 5.917199922435524e-1
allele num: 10314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000570752
  gene symbol: FLYWCH1
  hgvsc: ENST00000570752.1:n.1442T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1511-799T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.802-799T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1514-799T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.240-351T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.232-799T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.752-10T>C
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1567-10T>C
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 7.5e0
  variant carriers: 1641
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 1.75e1
  variant carriers: 1289
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 2.25e1
  variant carriers: 686
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 1.25e1
  variant carriers: 1488
genotype depth: GenotypeDepth
  all individuals: 11834
  bin: 2.5e0
  variant carriers: 2144
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 9.75e1
  variant carriers: 411
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.75e1
  variant carriers: 246
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 2.25e1
  variant carriers: 350
genotype quality: GenotypeQuality
  all individuals: 3808
  bin: 2.5e0
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.25e1
  variant carriers: 291
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 214
genotype quality: GenotypeQuality
  all individuals: 8045
  bin: 7.5e0
  variant carriers: 1412
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 1.75e1
  variant carriers: 480
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 1.25e1
  variant carriers: 540
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.75e1
  variant carriers: 119
num of homozygotes: 1703
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum

16-2986324-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2986324
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2986324
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 10344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.240-350G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.752-9G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.232-798G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1567-9G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1514-798G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000570752
  gene symbol: FLYWCH1
  hgvsc: ENST00000570752.1:n.1443G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1511-798G>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.802-798G>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17860
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16363
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

16-2986328-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2986328
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2986328
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 10518
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1511-794C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000570752
  gene symbol: FLYWCH1
  hgvsc: ENST00000570752.1:n.1447C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.802-794C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.232-794C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1567-5C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.240-346C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.752-5C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1514-794C>T
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18643
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17000
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.75e1
  variant carriers: 0
hgvs: c.752-5C>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

16-2986336-CCTGTGCTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2986336
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2986328
    reference: chr 16
allele count: 5
allele frequency: 4.568713450292397e-4
allele num: 10944
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.762_769delTGCTGTGC
  hgvsp: ENSP00000344122.5:p.Leu255ProfsTer25
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000570752
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsp: ENSP00000382575.2:p.Leu526ProfsTer25
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18454
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu255ProfsTer25
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: CCTGTGCTG
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

16-2986352-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2986352
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2986352
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 11534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000253928
  ensembl transcript: ENST00000253928
  gene symbol: FLYWCH1
  hgvsc: ENST00000253928.9:c.1514-770C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000344122
  ensembl transcript: ENST00000344592
  gene symbol: FLYWCH1
  hgvsc: ENST00000344592.5:c.771C>T
  hgvsp: ENSP00000344122.5:p.Pro258Leu
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000461566
  ensembl transcript: ENST00000571580
  gene symbol: FLYWCH1
  hgvsc: ENST00000571580.1:c.240-322C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000458661
  ensembl transcript: ENST00000573564
  gene symbol: FLYWCH1
  hgvsc: ENST00000573564.1:c.802-770C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000399938
  ensembl transcript: ENST00000416288
  gene symbol: FLYWCH1
  hgvsc: ENST00000416288.2:c.1511-770C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000570752
  gene symbol: FLYWCH1
  hgvsc: ENST00000570752.1:n.1471C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000059122
  ensembl transcript: ENST00000575604
  gene symbol: FLYWCH1
  hgvsc: ENST00000575604.1:n.232-770C>T
  variant of: http://identifiers.org/hgnc/25404
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000059122
  ensembl protein: ENSP00000382575
  ensembl transcript: ENST00000399667
  gene symbol: FLYWCH1
  hgvsc: ENST00000399667.2:c.1586C>T
  hgvsp: ENSP00000382575.2:p.Pro529Leu
  variant of: http://identifiers.org/hgnc/25404
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21903
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro258Leu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4136
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8770
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14764
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 5.13139e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.58e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.019e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

FS
type: SiteQuality
SIO_000300: 3.68e0

MQ
type: SiteQuality
SIO_000300: 5.443e1

QD
type: SiteQuality
SIO_000300: 7.06e0

GenotypeQuality
all individuals: 709
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6131
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.142074006395614e-4
allele num: 8756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.412e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.955e0

MQRankSum
type: SiteQuality
SIO_000300: 2.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.099e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.58e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.271e0

DP
type: SiteQuality
SIO_000300: 5.12998e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQ
type: SiteQuality
SIO_000300: 5.764e1

GenotypeQuality
all individuals: 23935
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 9.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13784
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.82e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

DP
type: SiteQuality
SIO_000300: 4.99691e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
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variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.589825119236884e-4
allele num: 12580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.306e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.046e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 9.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.18e-2

DP
type: SiteQuality
SIO_000300: 4.77396e5

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.200768491834774e-4
allele num: 8328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.49e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 8.69e0

VQSLOD
type: SiteQuality
SIO_000300: -9.529e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.691e0

DP
type: SiteQuality
SIO_000300: 4.64126e5

MQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

GenotypeQuality
all individuals: 60
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 2

GenotypeQuality
all individuals: 664
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variant carriers: 0

GenotypeQuality
all individuals: 115
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 607
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variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.231830500123183e-4
allele num: 8118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.42689e5

QD
type: SiteQuality
SIO_000300: 1.062e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.81e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.332e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26404
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4815
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.25e1
variant carriers: 1

South Asian
type: Population
allele count: 4
allele frequency: 5.073566717402334e-4
allele num: 7884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.13e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 1.551e0

VQSLOD
type: SiteQuality
SIO_000300: -4.256e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 4.23834e5

MQ
type: SiteQuality
SIO_000300: 5.843e1

QD
type: SiteQuality
SIO_000300: 1.187e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.008471157724889e-4
allele num: 9916
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.23834e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

VQSLOD
type: SiteQuality
SIO_000300: -4.256e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.13e-2

FS
type: SiteQuality
SIO_000300: 1.551e0

QD
type: SiteQuality
SIO_000300: 1.187e1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.020610224287735e-4
allele num: 9898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 1.201e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.23e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

QD
type: SiteQuality
SIO_000300: 8.09e0

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.241e0

MQ
type: SiteQuality
SIO_000300: 5.811e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.07e-1

DP
type: SiteQuality
SIO_000300: 4.23e5

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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variant carriers: 4

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.775067750677507e-4
allele num: 1476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8028
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 4.110715264456015e-4
allele num: 7298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.93e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.414e1

DP
type: SiteQuality
SIO_000300: 3.76068e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.688e-1

MQ
type: SiteQuality
SIO_000300: 5.789e1

GenotypeQuality
all individuals: 1603
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 6
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variant carriers: 1

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 445
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GenotypeQuality
all individuals: 14829
bin: 2.25e1
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 40
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6682
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.567398119122257e-3
allele num: 1276
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6844
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 1.13e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.84e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 2.133e0

DP
type: SiteQuality
SIO_000300: 3.403e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 276
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6844
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1276
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.49655791679138e-4
allele num: 6682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 3.403e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.84e-2

QD
type: SiteQuality
SIO_000300: 1.13e1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 2.133e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.43e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 2

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5732
num of homozygotes: 0

South Asian
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allele count: 81
allele frequency: 1.324395029431001e-2
allele num: 6116
num of homozygotes: 3

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1102
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.15025e5

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.844e1

VQSLOD
type: SiteQuality
SIO_000300: 4.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.302e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5288
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.75e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.06e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.363e0

DP
type: SiteQuality
SIO_000300: 3.03729e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 1.215e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.23e0

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

QD
type: SiteQuality
SIO_000300: 1.118e1

DP
type: SiteQuality
SIO_000300: 3.02639e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.21e-2

MQ
type: SiteQuality
SIO_000300: 5.728e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 29
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.717622810030917e-4
allele num: 5822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5240
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

African
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allele count: 7
allele frequency: 6.769825918762089e-3
allele num: 1034
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.21e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

DP
type: SiteQuality
SIO_000300: 3.02639e5

MQ
type: SiteQuality
SIO_000300: 5.728e1

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 9.23e0

QD
type: SiteQuality
SIO_000300: 1.118e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.984914648670107e-4
allele num: 5038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 2
allele frequency: 3.968253968253968e-3
allele num: 504
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 3.067484662576687e-3
allele num: 326
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 86
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
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MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQ
type: SiteQuality
SIO_000300: 5.682e1

FS
type: SiteQuality
SIO_000300: 1.183e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.859999999999999e-2

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.96204e5

BaseQRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.96e-1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

African
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allele count: 11
allele frequency: 1.291079812206573e-2
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
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FS
type: SiteQuality
SIO_000300: 3.663e0

MQ
type: SiteQuality
SIO_000300: 5.79e1

DP
type: SiteQuality
SIO_000300: 2.76544e5

VQSLOD
type: SiteQuality
SIO_000300: 4.51e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.04e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.283e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 70
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Other
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allele frequency: 0.0e0
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South Asian
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East Asian
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European (Non-Finnish)
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allele frequency: 2.305209774089442e-4
allele num: 4338
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
type: Population
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -9.494e-1

QD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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DP
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SIO_000300: 2.75405e5

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.305209774089442e-4
allele num: 4338
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.75405e5

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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MQ
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

FS
type: SiteQuality
SIO_000300: 1.0154e1

QD
type: SiteQuality
SIO_000300: 7.83e0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2789
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.6345e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.26e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 1.3366e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 2.969e1

VQSLOD
type: SiteQuality
SIO_000300: -4.678e-1

GenotypeQuality
all individuals: 470
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.592356687898089e-3
allele num: 628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2826
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 2.27924e5

FS
type: SiteQuality
SIO_000300: 2.392e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.75e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.28e-2

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2718
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.24978e5

QD
type: SiteQuality
SIO_000300: 9.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.76e-2

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2566
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.689189189189189e-3
allele num: 592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.870000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.217e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

DP
type: SiteQuality
SIO_000300: 2.20574e5

VQSLOD
type: SiteQuality
SIO_000300: -7.161e-1

GenotypeQuality
all individuals: 1669
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2
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variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.96849e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.39e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.259e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

FS
type: SiteQuality
SIO_000300: 3.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1485
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.80689e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.811e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.043e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.649999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.33e0

VQSLOD
type: SiteQuality
SIO_000300: -9.329999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.616e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.231e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.67e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

DP
type: SiteQuality
SIO_000300: 1.8066e5

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1360
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

DP
type: SiteQuality
SIO_000300: 1.7586e5

QD
type: SiteQuality
SIO_000300: 5.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.88e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
all individuals: 102
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1536
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.393922497909116e-4
allele num: 7174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

FS
type: SiteQuality
SIO_000300: 6.354e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.583e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.39e-2

DP
type: SiteQuality
SIO_000300: 1.5704e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3840
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.748251748251748e-3
allele num: 572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.34e-2

FS
type: SiteQuality
SIO_000300: 3.353e0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

DP
type: SiteQuality
SIO_000300: 1.60682e5

QD
type: SiteQuality
SIO_000300: 1.265e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.467e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-2

GenotypeQuality
all individuals: 93
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.377031120903333e-4
allele num: 7262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.751937984496124e-4
allele num: 3870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.21e-2

QD
type: SiteQuality
SIO_000300: 1.115e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

DP
type: SiteQuality
SIO_000300: 1.63449e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.56e-1

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3922
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.683123155352831e-4
allele num: 7454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 7.017543859649123e-3
allele num: 570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1544
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.1e-2

QD
type: SiteQuality
SIO_000300: 1.427e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.464e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.99e0

DP
type: SiteQuality
SIO_000300: 1.77171e5

GenotypeQuality
all individuals: 415
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1858
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 95
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 563
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 5.263157894736842e-3
allele num: 190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1544
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 1.578947368421053e-2
allele num: 570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.544529262086514e-4
allele num: 3930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
type: Population
allele count: 27
allele frequency: 3.611556982343499e-3
allele num: 7476
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 1.276e0

QD
type: SiteQuality
SIO_000300: 1.285e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.78266e5

GenotypeQuality
all individuals: 573
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5971
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.657454158915759e-4
allele num: 7526
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1558
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.21e-2

QD
type: SiteQuality
SIO_000300: 2.998e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.79744e5

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3968
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.326259946949602e-4
allele num: 7540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.80584e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.51e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.326259946949602e-4
allele num: 7540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3968
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

DP
type: SiteQuality
SIO_000300: 1.80584e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.51e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6015
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.326259946949602e-4
allele num: 7540
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.04e-1

FS
type: SiteQuality
SIO_000300: 4.295e0

DP
type: SiteQuality
SIO_000300: 1.80664e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.566e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.135e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.303e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1568
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.648305084745763e-4
allele num: 7552
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.08e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.439e1

DP
type: SiteQuality
SIO_000300: 1.81253e5

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.43e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeQuality
all individuals: 6038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 99
bin: 7.25e1
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GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 778
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.321003963011889e-4
allele num: 7570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.25e-1

QD
type: SiteQuality
SIO_000300: 1.448e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.36e-2

DP
type: SiteQuality
SIO_000300: 1.81823e5

MQ
type: SiteQuality
SIO_000300: 6.057e1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 5.05e0

MQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 7.5e0
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GenotypeQuality
all individuals: 91
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4038
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.640612622128334e-4
allele num: 7574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-2

FS
type: SiteQuality
SIO_000300: 1.937e0

QD
type: SiteQuality
SIO_000300: 1.004e1

DP
type: SiteQuality
SIO_000300: 1.82089e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 2003
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.469135802469136e-4
allele num: 4050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.927e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.699999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.82718e5

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.293e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1576
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 2.633658151171978e-4
allele num: 7594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4052
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: -2.643e-1

QD
type: SiteQuality
SIO_000300: 7.95e0

DP
type: SiteQuality
SIO_000300: 1.8265e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

FS
type: SiteQuality
SIO_000300: 7.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.37e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.478929102627665e-4
allele num: 4034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1568
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.44e-1

DP
type: SiteQuality
SIO_000300: 1.82433e5

VQSLOD
type: SiteQuality
SIO_000300: -2.259e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.41e-2

QD
type: SiteQuality
SIO_000300: 5.07e0

GenotypeQuality
all individuals: 734
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.473841554559044e-4
allele num: 4014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

FS
type: SiteQuality
SIO_000300: 8.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 9.66e0

DP
type: SiteQuality
SIO_000300: 1.82381e5

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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variant carriers: 7

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3998
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 1.219512195121951e-2
allele num: 574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

DP
type: SiteQuality
SIO_000300: 1.82218e5

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

FS
type: SiteQuality
SIO_000300: 1.109e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.158e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.49500998003992e-4
allele num: 4008
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.82008e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.872e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

QD
type: SiteQuality
SIO_000300: 1.474e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.26e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 202
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1530
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 190
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3950
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.02e-1

MQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.26e-2

DP
type: SiteQuality
SIO_000300: 1.80477e5

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.895e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
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allele count: 1
allele frequency: 1.327668613913967e-4
allele num: 7532
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3938
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 202
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1500
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3830
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 570
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.356483993488877e-4
allele num: 7372
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 202
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

QD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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DP
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SIO_000300: 1.74013e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 30
bin: 5.25e1
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GenotypeQuality
all individuals: 10
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.659574468085106e-4
allele num: 3760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7210
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.254e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.531e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.51e-2

DP
type: SiteQuality
SIO_000300: 1.68931e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.71e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1342
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3722
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7152
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.76678445229682e-3
allele num: 566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.63e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.755e0

VQSLOD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -3.58e-1

DP
type: SiteQuality
SIO_000300: 1.68218e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

QD
type: SiteQuality
SIO_000300: 1.109e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1272
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.050505050505051e-3
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3558
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.715e0

FS
type: SiteQuality
SIO_000300: 4.153e0

QD
type: SiteQuality
SIO_000300: 1.288e1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.71e-2

DP
type: SiteQuality
SIO_000300: 1.5751e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.508e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 5.770340450086555e-4
allele num: 3466
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.063e1

MQRankSum
type: SiteQuality
SIO_000300: -5.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.73e-2

FS
type: SiteQuality
SIO_000300: 1.808e0

DP
type: SiteQuality
SIO_000300: 1.53029e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.656e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 3.078817733990148e-4
allele num: 6496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.82e-2

QD
type: SiteQuality
SIO_000300: 1.097e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

DP
type: SiteQuality
SIO_000300: 1.49778e5

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.701258931609391e-4
allele num: 5878
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.18e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.359e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.151e0

DP
type: SiteQuality
SIO_000300: 1.31561e5

MQRankSum
type: SiteQuality
SIO_000300: -4.39e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.61e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2918
num of homozygotes: 0

South Asian
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allele frequency: 1.822821728034998e-4
allele num: 5486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.21516e5

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.658e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.858024691358024e-4
allele num: 2592
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
allele num: 182
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Latino
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allele frequency: 0.0e0
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South Asian
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allele num: 4638
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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allele frequency: 1.892505677517033e-3
allele num: 2642
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 1862
num of homozygotes: 0

Latino
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allele num: 112
num of homozygotes: 0

FS
type: SiteQuality
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BaseQRankSum
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QD
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MQ
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ClippingRankSum
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VQSLOD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 110
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European (Finnish)
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allele frequency: 3.333333333333334e-3
allele num: 300
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African
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East Asian
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South Asian
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allele frequency: 3.499222395023328e-3
allele num: 2572
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 1830
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Other
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MQRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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DP
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 555
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.75e1
variant carriers: 5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

South Asian
type: Population
allele count: 57
allele frequency: 2.602739726027397e-2
allele num: 2190
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.230012300123001e-3
allele num: 1626
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 1.530612244897959e-2
allele num: 392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.4039e4

VQSLOD
type: SiteQuality
SIO_000300: 5.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.212e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.27e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.239e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
all individuals: 233
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.605136436597111e-3
allele num: 1246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1238
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.320000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.88e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

DP
type: SiteQuality
SIO_000300: 6.1345e4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

FS
type: SiteQuality
SIO_000300: 5.17e0

VQSLOD
type: SiteQuality
SIO_000300: -1.596e0

QD
type: SiteQuality
SIO_000300: 7.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
all individuals: 286
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.19047619047619e-2
allele num: 84
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

QD
type: SiteQuality
SIO_000300: 1.451e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

FS
type: SiteQuality
SIO_000300: 6.047e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.04e-2

DP
type: SiteQuality
SIO_000300: 5.1609e4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.133e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

GenotypeQuality
all individuals: 1215
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 248
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6763
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.227e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.96e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 5.616e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.1967e4

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 331
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.75e1
variant carriers: 15

Latino
type: Population
allele count: 1
allele frequency: 1.666666666666667e-2
allele num: 60
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.044025157232704e-2
allele num: 636
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.063829787234043e-2
allele num: 94
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

QD
type: SiteQuality
SIO_000300: 1.562e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.65e-1

DP
type: SiteQuality
SIO_000300: 3.1001e4

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.12e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
all individuals: 1365
bin: 2.25e1
variant carriers: 269

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 60

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 101

GenotypeQuality
all individuals: 730
bin: 1.75e1
variant carriers: 241

GenotypeQuality
all individuals: 8003
bin: 7.5e0
variant carriers: 420

GenotypeQuality
all individuals: 96
bin: 6.25e1
variant carriers: 75

GenotypeQuality
all individuals: 37
bin: 6.75e1
variant carriers: 28

GenotypeQuality
all individuals: 57
bin: 7.25e1
variant carriers: 45

GenotypeQuality
all individuals: 382
bin: 3.25e1
variant carriers: 153

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 115

GenotypeQuality
all individuals: 125
bin: 8.25e1
variant carriers: 116

GenotypeQuality
all individuals: 127
bin: 9.25e1
variant carriers: 114

Other
type: Population
allele count: 19
allele frequency: 3.166666666666667e-1
allele num: 60
num of homozygotes: 2

South Asian
type: Population
allele count: 912
allele frequency: 4.031830238726791e-1
allele num: 2262
num of homozygotes: 179

African
type: Population
allele count: 287
allele frequency: 6.080508474576272e-1
allele num: 472
num of homozygotes: 88

European (Non-Finnish)
type: Population
allele count: 389
allele frequency: 2.343373493975903e-1
allele num: 1660
num of homozygotes: 45

Latino
type: Population
allele count: 43
allele frequency: 3.359375e-1
allele num: 128
num of homozygotes: 4

East Asian
type: Population
allele count: 78
allele frequency: 4.642857142857143e-1
allele num: 168
num of homozygotes: 14

European (Finnish)
type: Population
allele count: 22
allele frequency: 1.746031746031746e-1
allele num: 126
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.133e-1

DP
type: SiteQuality
SIO_000300: 1.58338e5

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e-1

QD
type: SiteQuality
SIO_000300: 1.703e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

FS
type: SiteQuality
SIO_000300: 3.052e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 16
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 866
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2462
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.149425287356322e-2
allele num: 174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.58195e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 6.274e0

MQRankSum
type: SiteQuality
SIO_000300: -1.026e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: -4.932e-1

QD
type: SiteQuality
SIO_000300: 1.263e1

GenotypeQuality
all individuals: 15
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3387
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
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GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.933910306845004e-4
allele num: 2542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.04e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.63735e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 2.218e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.057e1

VQSLOD
type: SiteQuality
SIO_000300: -1.054e0

GenotypeQuality
all individuals: 308
bin: 4.75e1
variant carriers: 282

GenotypeQuality
all individuals: 313
bin: 2.75e1
variant carriers: 226

GenotypeQuality
all individuals: 2908
bin: 9.75e1
variant carriers: 2817

GenotypeQuality
all individuals: 339
bin: 3.75e1
variant carriers: 292

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 95

GenotypeQuality
all individuals: 176
bin: 6.75e1
variant carriers: 159

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 99

GenotypeQuality
all individuals: 448
bin: 6.25e1
variant carriers: 201

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 146

GenotypeQuality
all individuals: 136
bin: 8.25e1
variant carriers: 129

GenotypeQuality
all individuals: 236
bin: 5.25e1
variant carriers: 230

GenotypeQuality
all individuals: 121
bin: 9.25e1
variant carriers: 107

South Asian
type: Population
allele count: 3614
allele frequency: 6.133740665308893e-1
allele num: 5892
num of homozygotes: 1040

East Asian
type: Population
allele count: 120
allele frequency: 5.94059405940594e-1
allele num: 202
num of homozygotes: 33

African
type: Population
allele count: 399
allele frequency: 6.903114186851211e-1
allele num: 578
num of homozygotes: 141

Latino
type: Population
allele count: 102
allele frequency: 5.930232558139535e-1
allele num: 172
num of homozygotes: 28

European (Finnish)
type: Population
allele count: 189
allele frequency: 4.846153846153846e-1
allele num: 390
num of homozygotes: 38

Other
type: Population
allele count: 63
allele frequency: 5.526315789473685e-1
allele num: 114
num of homozygotes: 15

European (Non-Finnish)
type: Population
allele count: 1616
allele frequency: 5.448415374241402e-1
allele num: 2966
num of homozygotes: 408

VQSLOD
type: SiteQuality
SIO_000300: 1.227e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 2.18577e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.755e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

QD
type: SiteQuality
SIO_000300: 2.071e1

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

GenotypeQuality
all individuals: 59
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.25e1
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GenotypeQuality
all individuals: 630
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.663e-1

QD
type: SiteQuality
SIO_000300: 2.101e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.02e-2

DP
type: SiteQuality
SIO_000300: 1.87641e5

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3036
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.91118e5

QD
type: SiteQuality
SIO_000300: 2.807e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.23e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.71e-1

GenotypeQuality
all individuals: 2093
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 6.291286568103177e-4
allele num: 6358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.186743148502231e-4
allele num: 3138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.291e0

MQ
type: SiteQuality
SIO_000300: 5.37e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-2

FS
type: SiteQuality
SIO_000300: 1.938e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.001e0

QD
type: SiteQuality
SIO_000300: 3.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

DP
type: SiteQuality
SIO_000300: 2.01122e5

VQSLOD
type: SiteQuality
SIO_000300: -6.983e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.56e-2