15-75336870-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75336870
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75336870
    reference: chr 15
allele count: 2
allele frequency: 1.709693964780304e-5
allele num: 116980
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.360+15G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000568207
  gene symbol: PPCDC
  hgvsc: ENST00000568207.1:n.488G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-10+15G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-4024G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.231+993G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-10+15G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.264+15G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000564953
  gene symbol: PPCDC
  hgvsc: ENST00000564953.1:n.395G>A
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22483
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6485
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

15-75336878-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75336878
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75336878
    reference: chr 15
allele count: 6
allele frequency: 5.170007065676323e-5
allele num: 116054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000568207
  gene symbol: PPCDC
  hgvsc: ENST00000568207.1:n.496C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000564953
  gene symbol: PPCDC
  hgvsc: ENST00000564953.1:n.403C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-10+23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.231+1001C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-10+23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.264+23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-4016C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.360+23C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8975
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4725
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10703
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19619
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6509
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25900
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

15-75336879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75336879
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75336879
    reference: chr 15
allele count: 5
allele frequency: 4.319803708119503e-5
allele num: 115746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-10+24G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000568207
  gene symbol: PPCDC
  hgvsc: ENST00000568207.1:n.497G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-4015G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.264+24G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.360+24G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-10+24G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.231+1002G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000564953
  gene symbol: PPCDC
  hgvsc: ENST00000564953.1:n.404G>A
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10498
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9614
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

15-75336882-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75336882
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75336882
    reference: chr 15
allele count: 3
allele frequency: 2.603579053338656e-5
allele num: 115226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-10+27C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-4012C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.231+1005C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000564953
  gene symbol: PPCDC
  hgvsc: ENST00000564953.1:n.407C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.264+27C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.360+27C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000568207
  gene symbol: PPCDC
  hgvsc: ENST00000568207.1:n.500C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-10+27C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4360
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5088
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

15-75336883-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75336883
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75336883
    reference: chr 15
allele count: 9
allele frequency: 7.814127943321525e-5
allele num: 115176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-4011G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000564953
  gene symbol: PPCDC
  hgvsc: ENST00000564953.1:n.408G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-10+28G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.360+28G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.231+1006G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-10+28G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000568207
  gene symbol: PPCDC
  hgvsc: ENST00000568207.1:n.501G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.264+28G>A
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10456
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17154
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23009
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/15-75336899-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75336899
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75336899
    reference: chr 15
allele count: 2
allele frequency: 1.772798184654659e-5
allele num: 112816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-10+44C>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000568207
  gene symbol: PPCDC
  hgvsc: ENST00000568207.1:n.517C>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000564953
  gene symbol: PPCDC
  hgvsc: ENST00000564953.1:n.424C>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.231+1022C>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.360+44C>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-10+44C>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-3995C>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.264+44C>A
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14467
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12380
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4275
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

15-75336903-GTTTGCTGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75336903
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75336895
    reference: chr 15
allele count: 1
allele frequency: 8.921084090138634e-6
allele num: 112094
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000568207
  gene symbol: PPCDC
  hgvsc: ENST00000568207.1:n.522_529delTTTGCTGA
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000564953
  gene symbol: PPCDC
  hgvsc: ENST00000564953.1:n.429_436delTTTGCTGA
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5692
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: GTTTGCTGA
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

15-75336905-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75336905
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75336905
    reference: chr 15
allele count: 1
allele frequency: 8.953353030710001e-6
allele num: 111690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-10+50T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000564953
  gene symbol: PPCDC
  hgvsc: ENST00000564953.1:n.430T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138621
  ensembl transcript: ENST00000568207
  gene symbol: PPCDC
  hgvsc: ENST00000568207.1:n.523T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-3989T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-10+50T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.360+50T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.231+1028T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.264+50T>A
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6553
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3450
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

15-75340856-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340856
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340856
    reference: chr 15
allele count: 2
allele frequency: 1.759974656364948e-5
allele num: 113638
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-38G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-9-38G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.265-38G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.232-38G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-9-38G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.361-38G>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33563
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

15-75340859-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340859
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340859
    reference: chr 15
allele count: 1
allele frequency: 8.792600147715683e-6
allele num: 113732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-9-35T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.265-35T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-35T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.232-35T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-9-35T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.361-35T>C
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33766
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

15-75340860-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340860
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340860
    reference: chr 15
allele count: 2
allele frequency: 1.755032555853911e-5
allele num: 113958
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.265-34A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-34A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-9-34A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-9-34A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.361-34A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.232-34A>G
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3381
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34050
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

15-75340871-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340871
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340871
    reference: chr 15
allele count: 1
allele frequency: 8.675284115554785e-6
allele num: 115270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.232-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-9-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.361-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.265-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-9-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-23C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2528
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

15-75340875-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340875
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340875
    reference: chr 15
allele count: 3
allele frequency: 2.589331952356292e-5
allele num: 115860
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.265-19T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.361-19T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-19T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-9-19T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-9-19T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.232-19T>A
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11647
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genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 163
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genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 358
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genotype quality: GenotypeQuality
  all individuals: 3027
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genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 718
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

15-75340876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340876
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340876
    reference: chr 15
allele count: 1
allele frequency: 8.622473615230737e-6
allele num: 115976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.232-18C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.265-18C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-9-18C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-18C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.361-18C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-9-18C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25393
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36023
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genotype quality: GenotypeQuality
  all individuals: 147
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genotype quality: GenotypeQuality
  all individuals: 697
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genotype quality: GenotypeQuality
  all individuals: 137
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genotype quality: GenotypeQuality
  all individuals: 3029
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genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 8294
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 25
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genotype quality: GenotypeQuality
  all individuals: 719
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-75340887-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340887
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340887
    reference: chr 15
allele count: 3
allele frequency: 2.544615593404356e-5
allele num: 117896
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-9-7T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-9-7T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.265-7T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-7T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.361-7T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.232-7T>C
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
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genotype depth: GenotypeDepth
  all individuals: 365
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5
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genotype quality: GenotypeQuality
  all individuals: 180
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 419
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
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genotype quality: GenotypeQuality
  all individuals: 37366
  bin: 6.25e1
  variant carriers: 0
hgvs: c.361-7T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

15-75340889-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340889
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340889
    reference: chr 15
allele count: 3
allele frequency: 2.539919061245915e-5
allele num: 118114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.265-5C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.232-5C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.361-5C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-9-5C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.136-5C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-9-5C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8430
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 9.75e1
  variant carriers: 3
hgvs: c.361-5C>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

15-75340896-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340896
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340896
    reference: chr 15
allele count: 1
allele frequency: 8.405904307185366e-6
allele num: 118964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.138C>G
  hgvsp: ENST00000564923.1:c.138C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-7C>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-7C>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.234C>G
  hgvsp: ENST00000568649.1:c.234C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.267C>G
  hgvsp: ENST00000567336.1:c.267C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.363C>G
  hgvsp: ENST00000342932.3:c.363C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2602
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38080
  bin: 6.25e1
  variant carriers: 0
hgvs: c.363C>G
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

15-75340896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340896
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340896
    reference: chr 15
allele count: 2
allele frequency: 1.681180861437073e-5
allele num: 118964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.234C>T
  hgvsp: ENST00000568649.1:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.138C>T
  hgvsp: ENST00000564923.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.363C>T
  hgvsp: ENST00000342932.3:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.267C>T
  hgvsp: ENST00000567336.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38080
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2602
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
hgvs: c.363C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-75340899-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340899
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340899
    reference: chr 15
allele count: 3
allele frequency: 2.514500284976699e-5
allele num: 119308
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.366C>T
  hgvsp: ENST00000342932.3:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.237C>T
  hgvsp: ENST00000568649.1:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.141C>T
  hgvsp: ENST00000564923.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.270C>T
  hgvsp: ENST00000567336.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3085
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys122Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

15-75340900-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340900
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340900
    reference: chr 15
allele count: 17
allele frequency: 1.421333377924184e-4
allele num: 119606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.142G>A
  hgvsp: ENSP00000456665.1:p.Val48Ile
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.367G>A
  hgvsp: ENSP00000343190.3:p.Val123Ile
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.271G>A
  hgvsp: ENSP00000456353.1:p.Val91Ile
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.238G>A
  hgvsp: ENSP00000455691.1:p.Val80Ile
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 13699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1906
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2610
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3098
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val123Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

15-75340904-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340904
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340904
    reference: chr 15
allele count: 1
allele frequency: 8.333611120370679e-6
allele num: 119996
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.146T>C
  hgvsp: ENSP00000456665.1:p.Met49Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.2T>C
  hgvsp: ENSP00000457490.1:p.Met1?
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.2T>C
  hgvsp: ENSP00000455499.1:p.Met1?
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.275T>C
  hgvsp: ENSP00000456353.1:p.Met92Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.371T>C
  hgvsp: ENSP00000343190.3:p.Met124Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.242T>C
  hgvsp: ENSP00000455691.1:p.Met81Thr
  variant of: http://identifiers.org/hgnc/28107
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13889
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38983
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8687
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2624
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS

15-75340906-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340906
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340906
    reference: chr 15
allele count: 1
allele frequency: 8.327365388138501e-6
allele num: 120086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.277C>T
  hgvsp: ENSP00000456353.1:p.Arg93Trp
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.4C>T
  hgvsp: ENSP00000455499.1:p.Arg2Trp
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.244C>T
  hgvsp: ENSP00000455691.1:p.Arg82Trp
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.148C>T
  hgvsp: ENSP00000456665.1:p.Arg50Trp
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.373C>T
  hgvsp: ENSP00000343190.3:p.Arg125Trp
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.4C>T
  hgvsp: ENSP00000457490.1:p.Arg2Trp
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8666
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38979
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg125Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

15-75340907-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340907
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340907
    reference: chr 15
allele count: 1
allele frequency: 8.308960382876895e-6
allele num: 120352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.278G>A
  hgvsp: ENSP00000456353.1:p.Arg93Gln
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.374G>A
  hgvsp: ENSP00000343190.3:p.Arg125Gln
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.245G>A
  hgvsp: ENSP00000455691.1:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.5G>A
  hgvsp: ENSP00000457490.1:p.Arg2Gln
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.149G>A
  hgvsp: ENSP00000456665.1:p.Arg50Gln
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.5G>A
  hgvsp: ENSP00000455499.1:p.Arg2Gln
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1920
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8727
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2628
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg125Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

15-75340907-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340907
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340907
    reference: chr 15
allele count: 1
allele frequency: 8.308960382876895e-6
allele num: 120352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.245G>C
  hgvsp: ENSP00000455691.1:p.Arg82Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.5G>C
  hgvsp: ENSP00000455499.1:p.Arg2Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.374G>C
  hgvsp: ENSP00000343190.3:p.Arg125Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.278G>C
  hgvsp: ENSP00000456353.1:p.Arg93Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.149G>C
  hgvsp: ENSP00000456665.1:p.Arg50Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.5G>C
  hgvsp: ENSP00000457490.1:p.Arg2Pro
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8727
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2628
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg125Pro
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

15-75340909-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340909
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340909
    reference: chr 15
allele count: 1
allele frequency: 8.301648707433296e-6
allele num: 120458
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.376G>A
  hgvsp: ENSP00000343190.3:p.Ala126Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.247G>A
  hgvsp: ENSP00000455691.1:p.Ala83Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.280G>A
  hgvsp: ENSP00000456353.1:p.Ala94Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.7G>A
  hgvsp: ENSP00000455499.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.7G>A
  hgvsp: ENSP00000457490.1:p.Ala3Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.151G>A
  hgvsp: ENSP00000456665.1:p.Ala51Thr
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8732
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala126Thr
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

15-75340918-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340918
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340918
    reference: chr 15
allele count: 5
allele frequency: 4.136881122584061e-5
allele num: 120864
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.160C>G
  hgvsp: ENSP00000456665.1:p.Arg54Gly
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.289C>G
  hgvsp: ENSP00000456353.1:p.Arg97Gly
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.16C>G
  hgvsp: ENSP00000457490.1:p.Arg6Gly
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.385C>G
  hgvsp: ENSP00000343190.3:p.Arg129Gly
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.256C>G
  hgvsp: ENSP00000455691.1:p.Arg86Gly
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.16C>G
  hgvsp: ENSP00000455499.1:p.Arg6Gly
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2631
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8790
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39603
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Arg129Gly
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

15-75340919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340919
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340919
    reference: chr 15
allele count: 90
allele frequency: 7.44195276840643e-4
allele num: 120936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.290G>A
  hgvsp: ENSP00000456353.1:p.Arg97His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.386G>A
  hgvsp: ENSP00000343190.3:p.Arg129His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.17G>A
  hgvsp: ENSP00000457490.1:p.Arg6His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.17G>A
  hgvsp: ENSP00000455499.1:p.Arg6His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.161G>A
  hgvsp: ENSP00000456665.1:p.Arg54His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.257G>A
  hgvsp: ENSP00000455691.1:p.Arg86His
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27020
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14047
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13197
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 9.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8794
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2635
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg129His
num of homozygotes: 3
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

15-75340926-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340926
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340926
    reference: chr 15
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.24G>A
  hgvsp: ENST00000569562.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.264G>A
  hgvsp: ENST00000568649.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.297G>A
  hgvsp: ENST00000567336.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.393G>A
  hgvsp: ENST00000342932.3:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.24G>A
  hgvsp: ENST00000563393.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.168G>A
  hgvsp: ENST00000564923.1:c.168G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8819
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2652
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39921
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys131Lys
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

15-75340927-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340927
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340927
    reference: chr 15
allele count: 2
allele frequency: 1.650955077512341e-5
allele num: 121142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.298C>G
  hgvsp: ENSP00000456353.1:p.Pro100Ala
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.265C>G
  hgvsp: ENSP00000455691.1:p.Pro89Ala
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.25C>G
  hgvsp: ENSP00000457490.1:p.Pro9Ala
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.394C>G
  hgvsp: ENSP00000343190.3:p.Pro132Ala
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.25C>G
  hgvsp: ENSP00000455499.1:p.Pro9Ala
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.169C>G
  hgvsp: ENSP00000456665.1:p.Pro57Ala
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro132Ala
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-75340927-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340927
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340927
    reference: chr 15
allele count: 2
allele frequency: 1.650955077512341e-5
allele num: 121142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.25C>T
  hgvsp: ENSP00000455499.1:p.Pro9Ser
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.169C>T
  hgvsp: ENSP00000456665.1:p.Pro57Ser
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.25C>T
  hgvsp: ENSP00000457490.1:p.Pro9Ser
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.394C>T
  hgvsp: ENSP00000343190.3:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.298C>T
  hgvsp: ENSP00000456353.1:p.Pro100Ser
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.265C>T
  hgvsp: ENSP00000455691.1:p.Pro89Ser
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro132Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

15-75340930-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340930
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340930
    reference: chr 15
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.301C>G
  hgvsp: ENSP00000456353.1:p.Leu101Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.28C>G
  hgvsp: ENSP00000455499.1:p.Leu10Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.268C>G
  hgvsp: ENSP00000455691.1:p.Leu90Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.172C>G
  hgvsp: ENSP00000456665.1:p.Leu58Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.397C>G
  hgvsp: ENSP00000343190.3:p.Leu133Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.28C>G
  hgvsp: ENSP00000457490.1:p.Leu10Val
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8820
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu133Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP

15-75340934-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340934
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340934
    reference: chr 15
allele count: 2
allele frequency: 1.649675014022238e-5
allele num: 121236
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.401T>C
  hgvsp: ENSP00000343190.3:p.Leu134Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.32T>C
  hgvsp: ENSP00000457490.1:p.Leu11Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.305T>C
  hgvsp: ENSP00000456353.1:p.Leu102Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.176T>C
  hgvsp: ENSP00000456665.1:p.Leu59Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.272T>C
  hgvsp: ENSP00000455691.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.32T>C
  hgvsp: ENSP00000455499.1:p.Leu11Pro
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu134Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

15-75340943-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340943
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340943
    reference: chr 15
allele count: 5
allele frequency: 4.122555324692458e-5
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.314C>T
  hgvsp: ENSP00000456353.1:p.Pro105Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.41C>T
  hgvsp: ENSP00000457490.1:p.Pro14Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.410C>T
  hgvsp: ENSP00000343190.3:p.Pro137Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.185C>T
  hgvsp: ENSP00000456665.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.281C>T
  hgvsp: ENSP00000455691.1:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.41C>T
  hgvsp: ENSP00000455499.1:p.Pro14Leu
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro137Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

15-75340944-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340944
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340944
    reference: chr 15
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.315G>A
  hgvsp: ENST00000567336.1:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.282G>A
  hgvsp: ENST00000568649.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.42G>A
  hgvsp: ENST00000563393.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.42G>A
  hgvsp: ENST00000569562.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.186G>A
  hgvsp: ENST00000564923.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.411G>A
  hgvsp: ENST00000342932.3:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40092
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8842
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro137Pro
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

15-75340944-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340944
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340944
    reference: chr 15
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.42G>C
  hgvsp: ENST00000563393.1:c.42G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.42G>C
  hgvsp: ENST00000569562.1:c.42G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.186G>C
  hgvsp: ENST00000564923.1:c.186G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.282G>C
  hgvsp: ENST00000568649.1:c.282G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.315G>C
  hgvsp: ENST00000567336.1:c.315G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.411G>C
  hgvsp: ENST00000342932.3:c.411G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40092
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro137Pro
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

15-75340946-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340946
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340946
    reference: chr 15
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.284C>T
  hgvsp: ENSP00000455691.1:p.Ala95Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.44C>T
  hgvsp: ENSP00000455499.1:p.Ala15Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.188C>T
  hgvsp: ENSP00000456665.1:p.Ala63Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.317C>T
  hgvsp: ENSP00000456353.1:p.Ala106Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.413C>T
  hgvsp: ENSP00000343190.3:p.Ala138Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.44C>T
  hgvsp: ENSP00000457490.1:p.Ala15Val
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8847
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala138Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

15-75340948-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340948
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340948
    reference: chr 15
allele count: 14
allele frequency: 1.153953940752708e-4
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.190A>G
  hgvsp: ENSP00000456665.1:p.Met64Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.46A>G
  hgvsp: ENSP00000457490.1:p.Met16Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.415A>G
  hgvsp: ENSP00000343190.3:p.Met139Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.46A>G
  hgvsp: ENSP00000455499.1:p.Met16Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.319A>G
  hgvsp: ENSP00000456353.1:p.Met107Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.286A>G
  hgvsp: ENSP00000455691.1:p.Met96Val
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13268
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40098
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8847
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met139Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

15-75340956-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340956
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340956
    reference: chr 15
allele count: 6
allele frequency: 4.945190801945108e-5
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.54C>T
  hgvsp: ENST00000563393.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.327C>T
  hgvsp: ENST00000567336.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.294C>T
  hgvsp: ENST00000568649.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.54C>T
  hgvsp: ENST00000569562.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.198C>T
  hgvsp: ENST00000564923.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.423C>T
  hgvsp: ENST00000342932.3:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8851
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr141Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

15-75340957-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340957
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340957
    reference: chr 15
allele count: 2
allele frequency: 1.64836976230508e-5
allele num: 121332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.55G>A
  hgvsp: ENSP00000457490.1:p.Ala19Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.424G>A
  hgvsp: ENSP00000343190.3:p.Ala142Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.199G>A
  hgvsp: ENSP00000456665.1:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.295G>A
  hgvsp: ENSP00000455691.1:p.Ala99Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.55G>A
  hgvsp: ENSP00000455499.1:p.Ala19Thr
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.328G>A
  hgvsp: ENSP00000456353.1:p.Ala110Thr
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8856
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2131
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala142Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

15-75340967-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340967
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340967
    reference: chr 15
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.65A>T
  hgvsp: ENSP00000457490.1:p.Glu22Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.338A>T
  hgvsp: ENSP00000456353.1:p.Glu113Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.434A>T
  hgvsp: ENSP00000343190.3:p.Glu145Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.209A>T
  hgvsp: ENSP00000456665.1:p.Glu70Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.65A>T
  hgvsp: ENSP00000455499.1:p.Glu22Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.305A>T
  hgvsp: ENSP00000455691.1:p.Glu102Val
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2659
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40119
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu145Val
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

15-75340973-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340973
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340973
    reference: chr 15
allele count: 4
allele frequency: 3.296522169111587e-5
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.311C>T
  hgvsp: ENSP00000455691.1:p.Pro104Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.344C>T
  hgvsp: ENSP00000456353.1:p.Pro115Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.440C>T
  hgvsp: ENSP00000343190.3:p.Pro147Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.71C>T
  hgvsp: ENSP00000455499.1:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.71C>T
  hgvsp: ENSP00000457490.1:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.215C>T
  hgvsp: ENSP00000456665.1:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2655
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro147Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

15-75340974-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340974
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340974
    reference: chr 15
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.441G>A
  hgvsp: ENST00000342932.3:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.345G>A
  hgvsp: ENST00000567336.1:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.312G>A
  hgvsp: ENST00000568649.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.72G>A
  hgvsp: ENST00000563393.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.216G>A
  hgvsp: ENST00000564923.1:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.72G>A
  hgvsp: ENST00000569562.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro147Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

15-75340974-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340974
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340974
    reference: chr 15
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.216G>T
  hgvsp: ENST00000564923.1:c.216G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.441G>T
  hgvsp: ENST00000342932.3:c.441G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.72G>T
  hgvsp: ENST00000563393.1:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.312G>T
  hgvsp: ENST00000568649.1:c.312G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.345G>T
  hgvsp: ENST00000567336.1:c.345G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.72G>T
  hgvsp: ENST00000569562.1:c.72G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro147Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

15-75340982-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340982
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340982
    reference: chr 15
allele count: 4
allele frequency: 3.296413502109704e-5
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.224C>T
  hgvsp: ENSP00000456665.1:p.Ala75Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.320C>T
  hgvsp: ENSP00000455691.1:p.Ala107Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.80C>T
  hgvsp: ENSP00000457490.1:p.Ala27Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.80C>T
  hgvsp: ENSP00000455499.1:p.Ala27Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.353C>T
  hgvsp: ENSP00000456353.1:p.Ala118Val
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.449C>T
  hgvsp: ENSP00000343190.3:p.Ala150Val
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala150Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

15-75340983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340983
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340983
    reference: chr 15
allele count: 13
allele frequency: 1.071352046282408e-4
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.81G>A
  hgvsp: ENST00000569562.1:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.354G>A
  hgvsp: ENST00000567336.1:c.354G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.321G>A
  hgvsp: ENST00000568649.1:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.450G>A
  hgvsp: ENST00000342932.3:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.81G>A
  hgvsp: ENST00000563393.1:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.225G>A
  hgvsp: ENST00000564923.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27357
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40113
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8857
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala150Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS

15-75340984-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340984
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340984
    reference: chr 15
allele count: 3
allele frequency: 2.472310126582278e-5
allele num: 121344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.226C>T
  hgvsp: ENSP00000456665.1:p.Gln76Ter
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.322C>T
  hgvsp: ENSP00000455691.1:p.Gln108Ter
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.82C>T
  hgvsp: ENSP00000457490.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.451C>T
  hgvsp: ENSP00000343190.3:p.Gln151Ter
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.82C>T
  hgvsp: ENSP00000455499.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.355C>T
  hgvsp: ENSP00000456353.1:p.Gln119Ter
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40141
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln151Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

15-75340985-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340985
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340985
    reference: chr 15
allele count: 22
allele frequency: 1.812997544212417e-4
allele num: 121346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.83A>G
  hgvsp: ENSP00000455499.1:p.Gln28Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.356A>G
  hgvsp: ENSP00000456353.1:p.Gln119Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.227A>G
  hgvsp: ENSP00000456665.1:p.Gln76Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.83A>G
  hgvsp: ENSP00000457490.1:p.Gln28Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.323A>G
  hgvsp: ENSP00000455691.1:p.Gln108Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.452A>G
  hgvsp: ENSP00000343190.3:p.Gln151Arg
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 27365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln151Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

15-75340989-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75340989
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75340989
    reference: chr 15
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.87G>C
  hgvsp: ENSP00000455499.1:p.Gln29His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.456G>C
  hgvsp: ENSP00000343190.3:p.Gln152His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.327G>C
  hgvsp: ENSP00000455691.1:p.Gln109His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.87G>C
  hgvsp: ENSP00000457490.1:p.Gln29His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.231G>C
  hgvsp: ENSP00000456665.1:p.Gln77His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.360G>C
  hgvsp: ENSP00000456353.1:p.Gln120His
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2646
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln152His
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

15-75341015-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341015
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341015
    reference: chr 15
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.482A>G
  hgvsp: ENSP00000343190.3:p.Tyr161Cys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.113A>G
  hgvsp: ENSP00000457490.1:p.Tyr38Cys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.353A>G
  hgvsp: ENSP00000455691.1:p.Tyr118Cys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.257A>G
  hgvsp: ENSP00000456665.1:p.Tyr86Cys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.113A>G
  hgvsp: ENSP00000455499.1:p.Tyr38Cys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.386A>G
  hgvsp: ENSP00000456353.1:p.Tyr129Cys
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8857
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40083
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr161Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

15-75341019-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341019
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341019
    reference: chr 15
allele count: 3
allele frequency: 2.473941153186436e-5
allele num: 121264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.390C>T
  hgvsp: ENST00000567336.1:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.117C>T
  hgvsp: ENST00000569562.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.117C>T
  hgvsp: ENST00000563393.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.486C>T
  hgvsp: ENST00000342932.3:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.261C>T
  hgvsp: ENST00000564923.1:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.357C>T
  hgvsp: ENST00000568649.1:c.357C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40061
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val162Val
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

15-75341020-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341020
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341020
    reference: chr 15
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.391G>A
  hgvsp: ENSP00000456353.1:p.Glu131Lys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.262G>A
  hgvsp: ENSP00000456665.1:p.Glu88Lys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.358G>A
  hgvsp: ENSP00000455691.1:p.Glu120Lys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.487G>A
  hgvsp: ENSP00000343190.3:p.Glu163Lys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.118G>A
  hgvsp: ENSP00000455499.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.118G>A
  hgvsp: ENSP00000457490.1:p.Glu40Lys
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3144
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu163Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

15-75341046-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341046
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341046
    reference: chr 15
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.513G>A
  hgvsp: ENST00000342932.3:c.513G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.144G>A
  hgvsp: ENST00000569562.1:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.417G>A
  hgvsp: ENST00000567336.1:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.384G>A
  hgvsp: ENST00000568649.1:c.384G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.144G>A
  hgvsp: ENST00000563393.1:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.288G>A
  hgvsp: ENST00000564923.1:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu171Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

15-75341047-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341047
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341047
    reference: chr 15
allele count: 2
allele frequency: 1.655738790648387e-5
allele num: 120792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.385G>A
  hgvsp: ENSP00000455691.1:p.Val129Met
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.145G>A
  hgvsp: ENSP00000457490.1:p.Val49Met
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.145G>A
  hgvsp: ENSP00000455499.1:p.Val49Met
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.289G>A
  hgvsp: ENSP00000456665.1:p.Val97Met
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.514G>A
  hgvsp: ENSP00000343190.3:p.Val172Met
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.418G>A
  hgvsp: ENSP00000456353.1:p.Val140Met
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8733
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2606
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val172Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

15-75341053-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341053
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341053
    reference: chr 15
allele count: 2
allele frequency: 1.659971448491086e-5
allele num: 120484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.151G>A
  hgvsp: ENSP00000457490.1:p.Gly51Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.424G>A
  hgvsp: ENSP00000456353.1:p.Gly142Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.295G>A
  hgvsp: ENSP00000456665.1:p.Gly99Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.151G>A
  hgvsp: ENSP00000455499.1:p.Gly51Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.520G>A
  hgvsp: ENSP00000343190.3:p.Gly174Arg
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.391G>A
  hgvsp: ENSP00000455691.1:p.Gly131Arg
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3069
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8608
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly174Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

15-75341055-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341055
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341055
    reference: chr 15
allele count: 5
allele frequency: 4.151444702756559e-5
allele num: 120440
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.522A>G
  hgvsp: ENST00000342932.3:c.522A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.426A>G
  hgvsp: ENST00000567336.1:c.426A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.297A>G
  hgvsp: ENST00000564923.1:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.153A>G
  hgvsp: ENST00000563393.1:c.153A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.153A>G
  hgvsp: ENST00000569562.1:c.153A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.393A>G
  hgvsp: ENST00000568649.1:c.393A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27019
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3072
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2589
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8611
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly174Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

15-75341056-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341056
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341056
    reference: chr 15
allele count: 1
allele frequency: 8.308408109006315e-6
allele num: 120360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.154G>C
  hgvsp: ENSP00000457490.1:p.Asp52His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.523G>C
  hgvsp: ENSP00000343190.3:p.Asp175His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.298G>C
  hgvsp: ENSP00000456665.1:p.Asp100His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.394G>C
  hgvsp: ENSP00000455691.1:p.Asp132His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.154G>C
  hgvsp: ENSP00000455499.1:p.Asp52His
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.427G>C
  hgvsp: ENSP00000456353.1:p.Asp143His
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26960
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp175His
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-75341065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341065
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341065
    reference: chr 15
allele count: 36
allele frequency: 3.003053103989055e-4
allele num: 119878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+3G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+3G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+3G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+3G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+3G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+3G>A
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26530
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 9.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37501
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 9.25e1
  variant carriers: 0
hgvs: c.529+3G>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

15-75341067-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341067
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341067
    reference: chr 15
allele count: 1
allele frequency: 8.348639171814994e-6
allele num: 119780
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+5G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+5G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+5G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+5G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+5G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+5G>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8393
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
hgvs: c.529+5G>T
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

15-75341068-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341068
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341068
    reference: chr 15
allele count: 1
allele frequency: 8.357011532675915e-6
allele num: 119660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+6T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+6T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+6T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+6T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+6T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+6T>A
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 9.75e1
  variant carriers: 0
hgvs: c.529+6T>A
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-75341070-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341070
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341070
    reference: chr 15
allele count: 1
allele frequency: 8.364840900726069e-6
allele num: 119548
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+8T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+8T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+8T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+8T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+8T>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+8T>A
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
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genotype quality: GenotypeQuality
  all individuals: 2246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
hgvs: c.529+8T>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

15-75341084-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341084
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341084
    reference: chr 15
allele count: 2
allele frequency: 1.688362119907478e-5
allele num: 118458
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+22T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+22T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+22T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+22T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+22T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+22T>C
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 235
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 26
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7725
  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 33096
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 1335
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

15-75341090-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341090
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341090
    reference: chr 15
allele count: 2
allele frequency: 1.695978834184149e-5
allele num: 117926
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+28A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+28A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+28A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+28A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+28A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+28A>G
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11045
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7044
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5091
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2683
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS

15-75341096-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341096
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341096
    reference: chr 15
allele count: 1
allele frequency: 8.522388314101144e-6
allele num: 117338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+34G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+34G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+34G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+34G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+34G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+34G>A
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19598
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5633
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum

15-75341106-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341106
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341106
    reference: chr 15
allele count: 6
allele frequency: 5.184033177812338e-5
allele num: 115740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+44C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+44C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+44C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+44C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+44C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+44C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4903
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5478
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5923
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 568
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2386
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/15-75341109-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341109
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341109
    reference: chr 15
allele count: 2
allele frequency: 1.73517724835592e-5
allele num: 115262
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.529+47A>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.160+47A>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.304+47A>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.400+47A>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.160+47A>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.433+47A>C
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11638
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13856
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 5237
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12952
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5504
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4767
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

15-75341442-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341442
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341442
    reference: chr 15
allele count: 2
allele frequency: 1.652319029758266e-5
allele num: 121042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.434-49G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.161-49G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.161-49G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.305-49G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.401-49G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.530-49G>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4451
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

15-75341445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341445
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341445
    reference: chr 15
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.161-46A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.401-46A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.161-46A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.530-46A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.434-46A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.305-46A>G
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4443
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37041
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

15-75341447-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341447
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341447
    reference: chr 15
allele count: 4
allele frequency: 3.303873792021145e-5
allele num: 121070
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.434-44A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.161-44A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.530-44A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.401-44A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.305-44A>G
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.161-44A>G
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4442
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8761
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37459
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

15-75341450-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341450
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341450
    reference: chr 15
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.305-41C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.161-41C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.401-41C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.434-41C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.530-41C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.161-41C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10691
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

15-75341454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341454
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341454
    reference: chr 15
allele count: 138
allele frequency: 1.139403547012781e-3
allele num: 121116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.401-37G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.434-37G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.161-37G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.530-37G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.161-37G>A
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.305-37G>A
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12908
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10696
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 28146
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38236
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 2
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

15-75341454-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341454
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341454
    reference: chr 15
allele count: 5
allele frequency: 4.128273721060801e-5
allele num: 121116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.434-37G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.305-37G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.530-37G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.161-37G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.161-37G>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.401-37G>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2709
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4471
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8778
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

15-75341455-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341455
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341455
    reference: chr 15
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.161-36T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.530-36T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.434-36T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.161-36T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.305-36T>C
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.401-36T>C
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4336
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8801
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

15-75341468-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 75341468
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 75341468
    reference: chr 15
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000343190
  ensembl transcript: ENST00000342932
  gene symbol: PPCDC
  hgvsc: ENST00000342932.3:c.530-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456665
  ensembl transcript: ENST00000564923
  gene symbol: PPCDC
  hgvsc: ENST00000564923.1:c.305-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455499
  ensembl transcript: ENST00000569562
  gene symbol: PPCDC
  hgvsc: ENST00000569562.1:c.161-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000455691
  ensembl transcript: ENST00000568649
  gene symbol: PPCDC
  hgvsc: ENST00000568649.1:c.401-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000456353
  ensembl transcript: ENST00000567336
  gene symbol: PPCDC
  hgvsc: ENST00000567336.1:c.434-23C>T
  variant of: http://identifiers.org/hgnc/28107
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138621
  ensembl protein: ENSP00000457490
  ensembl transcript: ENST00000563393
  gene symbol: PPCDC
  hgvsc: ENST00000563393.1:c.161-23C>T
  variant of: http://identifiers.org/hgnc/28107
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10786
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28630
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 1370
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5445
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2290
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5110
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.96232339089482e-4
allele num: 10192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 1.355e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

FS
type: SiteQuality
SIO_000300: 3.947e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.691692e6

MQRankSum
type: SiteQuality
SIO_000300: -1.195e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.35e-1

GenotypeQuality
all individuals: 140
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2284
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2501
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5101
bin: 9.75e1
variant carriers: 5

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.967342120794806e-4
allele num: 10166
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.557452863749555e-4
allele num: 11244
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.97e-1

DP
type: SiteQuality
SIO_000300: 1.62708e6

VQSLOD
type: SiteQuality
SIO_000300: 3.12e0

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

QD
type: SiteQuality
SIO_000300: 1.1e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6698
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23544
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1771
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5100
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 901
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.911067545891998e-5
allele num: 11222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64746
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.831657935721365e-4
allele num: 14126
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.97e-1

QD
type: SiteQuality
SIO_000300: 1.049e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.084e0

DP
type: SiteQuality
SIO_000300: 1.601918e6

MQRankSum
type: SiteQuality
SIO_000300: -2.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-2

GenotypeQuality
all individuals: 22511
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 498
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variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.098085383233162e-5
allele num: 64556
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.93814801573114e-5
allele num: 11188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6076
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.297e0

QD
type: SiteQuality
SIO_000300: 1.523e1

DP
type: SiteQuality
SIO_000300: 1.579269e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1101
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variant carriers: 0

GenotypeQuality
all individuals: 220
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1219
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variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.394484040904865e-4
allele num: 64540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 1.276e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.194e0

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

QD
type: SiteQuality
SIO_000300: 1.264e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

DP
type: SiteQuality
SIO_000300: 1.576061e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 145
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5073
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 694
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6321
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variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.139520281301017e-5
allele num: 63704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

DP
type: SiteQuality
SIO_000300: 1.463789e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

QD
type: SiteQuality
SIO_000300: 8.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.256e0

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-2

FS
type: SiteQuality
SIO_000300: 3.344e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.52e-1

GenotypeQuality
all individuals: 6336
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3280
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variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11048
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.001803245842517e-4
allele num: 9982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.178e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 1.449823e6

MQ
type: SiteQuality
SIO_000300: 5.113e1

FS
type: SiteQuality
SIO_000300: 5.632e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.788e0

QD
type: SiteQuality
SIO_000300: 3.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1555
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variant carriers: 0

GenotypeQuality
all individuals: 7166
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variant carriers: 0

GenotypeQuality
all individuals: 1239
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1086
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variant carriers: 0

GenotypeQuality
all individuals: 5068
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6020
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variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.120838070488874e-5
allele num: 12314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.658e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

DP
type: SiteQuality
SIO_000300: 1.445201e6

QD
type: SiteQuality
SIO_000300: 5.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.54e-1

FS
type: SiteQuality
SIO_000300: 5.653e0

VQSLOD
type: SiteQuality
SIO_000300: -1.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 708
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 78
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 75
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GenotypeQuality
all individuals: 221
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.337540906965872e-4
allele num: 8556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.026e-1

FS
type: SiteQuality
SIO_000300: 3.699e0

QD
type: SiteQuality
SIO_000300: 8.76e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
SIO_000300: 1.606085e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -6.61e-1

GenotypeQuality
all individuals: 247
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8021
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variant carriers: 0

GenotypeQuality
all individuals: 238
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1850
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GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57153633392004e-5
allele num: 63632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12808
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.04e-1

DP
type: SiteQuality
SIO_000300: 1.61068e6

FS
type: SiteQuality
SIO_000300: 1.177e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.06e-1

QD
type: SiteQuality
SIO_000300: 1.419e1

MQRankSum
type: SiteQuality
SIO_000300: 2.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.77e0

VQSLOD
type: SiteQuality
SIO_000300: -1.098e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 148
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 299
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12922
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.33590282644242e-4
allele num: 8562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.23e1

VQSLOD
type: SiteQuality
SIO_000300: 9.330000000000001e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.259e0

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.612103e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-4
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13580
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.634807e6

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

GenotypeQuality
all individuals: 722
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35840
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GenotypeQuality
all individuals: 2726
bin: 2.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 8292
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.655926995064718e-5
allele num: 64434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.825e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.09e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.312e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

QD
type: SiteQuality
SIO_000300: 1.326e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.472e0

DP
type: SiteQuality
SIO_000300: 1.642293e6

GenotypeQuality
all individuals: 991
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2541
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.002004008016032e-4
allele num: 9980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64472
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.281e1

DP
type: SiteQuality
SIO_000300: 1.644653e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.906e1

VQSLOD
type: SiteQuality
SIO_000300: -1.044e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.436e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.28e-1

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65158
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.485130111524163e-4
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.667412e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.152e1

MQ
type: SiteQuality
SIO_000300: 5.984e1

FS
type: SiteQuality
SIO_000300: 2.113e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.87e-1

GenotypeQuality
all individuals: 367
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1892
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variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65252
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598752598752599e-4
allele num: 11544
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.75e-1

FS
type: SiteQuality
SIO_000300: 1.0395e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e0

VQSLOD
type: SiteQuality
SIO_000300: -1.138e0

QD
type: SiteQuality
SIO_000300: 1.067e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.777e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.670956e6

GenotypeQuality
all individuals: 1271
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
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GenotypeQuality
all individuals: 732
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variant carriers: 0

GenotypeQuality
all individuals: 8521
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.848e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

DP
type: SiteQuality
SIO_000300: 1.681404e6

FS
type: SiteQuality
SIO_000300: 4.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.98e-1

QD
type: SiteQuality
SIO_000300: 1.047e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1898
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8521
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65604
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731601731601732e-4
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.681404e6

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-1

QD
type: SiteQuality
SIO_000300: 1.047e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

FS
type: SiteQuality
SIO_000300: 4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.848e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.98e-1

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 8568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 996
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variant carriers: 0

GenotypeQuality
all individuals: 38396
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variant carriers: 0

GenotypeQuality
all individuals: 1902
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variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521005080156968e-5
allele num: 65746
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.317497103128621e-4
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15736
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

DP
type: SiteQuality
SIO_000300: 1.686339e6

FS
type: SiteQuality
SIO_000300: 4.049e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.954e0

QD
type: SiteQuality
SIO_000300: 1.09e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 996
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15872
num of homozygotes: 0

Latino
type: Population
allele count: 16
allele frequency: 1.384322547153487e-3
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.811616954474098e-5
allele num: 10192
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e0

QD
type: SiteQuality
SIO_000300: 1.245e1

DP
type: SiteQuality
SIO_000300: 1.690401e6

FS
type: SiteQuality
SIO_000300: 1.905e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.981e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 3096
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variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514646632940535e-5
allele num: 66022
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.69387e6

MQRankSum
type: SiteQuality
SIO_000300: -1.095e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -6.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.47e-1

QD
type: SiteQuality
SIO_000300: 1.468e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.768e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2167
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variant carriers: 1

GenotypeQuality
all individuals: 735
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51372952680815e-5
allele num: 66062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16090
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.738e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e-1

MQ
type: SiteQuality
SIO_000300: 5.882e1

DP
type: SiteQuality
SIO_000300: 1.696632e6

VQSLOD
type: SiteQuality
SIO_000300: -9.192e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3116
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 996
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variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 39290
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GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510254628930438e-5
allele num: 66214
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.831e0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

DP
type: SiteQuality
SIO_000300: 1.699415e6

VQSLOD
type: SiteQuality
SIO_000300: -2.876e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510254628930438e-5
allele num: 66214
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.831e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

VQSLOD
type: SiteQuality
SIO_000300: -2.876e-1

DP
type: SiteQuality
SIO_000300: 1.699415e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509388395822013e-5
allele num: 66252
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.700698e6

MQ
type: SiteQuality
SIO_000300: 5.94e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

BaseQRankSum
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SIO_000300: -4.988e0

VQSLOD
type: SiteQuality
SIO_000300: 5.570000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.527399735035529e-5
allele num: 66424
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.67e-1

DP
type: SiteQuality
SIO_000300: 1.707142e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.419999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

FS
type: SiteQuality
SIO_000300: 2.6e0

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

QD
type: SiteQuality
SIO_000300: 1.306e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.203840250398772e-4
allele num: 66454
num of homozygotes: 0

European (Finnish)
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allele count: 4
allele frequency: 6.049606775559589e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.678668215253581e-5
allele num: 10332
num of homozygotes: 0

South Asian
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allele count: 73
allele frequency: 4.446881091617933e-3
allele num: 16416
num of homozygotes: 3

East Asian
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allele count: 2
allele frequency: 2.313208420078649e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.414e1

VQSLOD
type: SiteQuality
SIO_000300: 6.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

DP
type: SiteQuality
SIO_000300: 1.711089e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.91e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.65e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.549e0

VQSLOD
type: SiteQuality
SIO_000300: 2.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 2.389e0

DP
type: SiteQuality
SIO_000300: 1.710234e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.811e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.00543984612148e-5
allele num: 66546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

BaseQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

VQSLOD
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DP
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SIO_000300: 1.710831e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.00543984612148e-5
allele num: 66546
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
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SIO_000300: 2.99e0

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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DP
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SIO_000300: 1.710831e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

InbreedingCoeff
type: SiteQuality
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QD
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SIO_000300: 1.172e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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East Asian
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allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.42e-1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
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num of homozygotes: 0

Latino
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East Asian
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.002642325246217e-5
allele num: 66608
num of homozygotes: 0

South Asian
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ClippingRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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QD
type: SiteQuality
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 2146
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GenotypeQuality
all individuals: 19
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GenotypeQuality
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GenotypeQuality
all individuals: 8835
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GenotypeQuality
all individuals: 3144
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.52e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.713269e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-2

QD
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SIO_000300: 1.36e1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66656
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African
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allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-1

QD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -8.54e-1

MQRankSum
type: SiteQuality
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FS
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SIO_000300: 1.174e0

MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.713178e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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FS
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SIO_000300: 1.174e0

ClippingRankSum
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InbreedingCoeff
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SIO_000300: 0.0e0

MQ
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SIO_000300: 5.975e1

MQRankSum
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VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.713178e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.16e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

FS
type: SiteQuality
SIO_000300: 7.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.05e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 4.845548152634767e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 8.998740176375308e-5
allele num: 66676
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.103e0

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.714136e6

ReadPosRankSum
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SIO_000300: 1.74e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.195e1

VQSLOD
type: SiteQuality
SIO_000300: 3.62e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.998980173370527e-5
allele num: 66678
num of homozygotes: 0

African
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allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.34e1

FS
type: SiteQuality
SIO_000300: 1.102e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.945e1

ClippingRankSum
type: SiteQuality
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DP
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

African
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South Asian
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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allele num: 8650
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European (Finnish)
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African
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DP
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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QD
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MQ
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele num: 6614
num of homozygotes: 0

East Asian
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African
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Latino
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European (Non-Finnish)
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allele frequency: 4.498560460652591e-5
allele num: 66688
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South Asian
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allele num: 16510
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Other
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ClippingRankSum
type: SiteQuality
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FS
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MQ
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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Other
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East Asian
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MQRankSum
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QD
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FS
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.713815e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 8.928000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.383e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.41e-1

QD
type: SiteQuality
SIO_000300: 1.052e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.884615384615385e-4
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.301e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.338e1

DP
type: SiteQuality
SIO_000300: 1.713907e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.28e-1

GenotypeQuality
all individuals: 2653
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.504060825989287e-4
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.119e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.267e1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.08e0

DP
type: SiteQuality
SIO_000300: 1.714355e6

FS
type: SiteQuality
SIO_000300: 5.33e-1

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1005
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.468208092485549e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.565e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.516e0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

QD
type: SiteQuality
SIO_000300: 1.057e1

DP
type: SiteQuality
SIO_000300: 1.713676e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-2

GenotypeQuality
all individuals: 3147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 9.75e1
variant carriers: 22

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.349446726841995e-4
allele num: 66694
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923076923076923e-4
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.504060825989287e-4
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.714459e6

FS
type: SiteQuality
SIO_000300: 1.786e0

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.282e0

QD
type: SiteQuality
SIO_000300: 1.256e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-2

GenotypeQuality
all individuals: 2094
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 40156
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3149
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.92e-1

DP
type: SiteQuality
SIO_000300: 1.71306e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.257e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 1.895e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.79e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 731
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 1936
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GenotypeQuality
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GenotypeQuality
all individuals: 3143
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.531e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e0

FS
type: SiteQuality
SIO_000300: 9.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

DP
type: SiteQuality
SIO_000300: 1.712223e6

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 115
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GenotypeQuality
all individuals: 2091
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8852
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.196e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.712093e6

FS
type: SiteQuality
SIO_000300: 1.459e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.49e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2636
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variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.505e0

FS
type: SiteQuality
SIO_000300: 1.214e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.924e1

VQSLOD
type: SiteQuality
SIO_000300: -8.38e-2

DP
type: SiteQuality
SIO_000300: 1.711727e6

QD
type: SiteQuality
SIO_000300: 1.475e1

MQRankSum
type: SiteQuality
SIO_000300: -1.129e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 726
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.744e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.701411e6

VQSLOD
type: SiteQuality
SIO_000300: -1.594e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.403e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.857e0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 3108
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variant carriers: 0

GenotypeQuality
all individuals: 2081
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GenotypeQuality
all individuals: 1002
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GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 157
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GenotypeQuality
all individuals: 594
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GenotypeQuality
all individuals: 159
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006795357507968e-5
allele num: 66516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 896
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African
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.701156e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16042
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 892
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.821e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 3.081e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.693564e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.530347299617458e-5
allele num: 66398
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.26e0

MQRankSum
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SIO_000300: 2.76e-1

ReadPosRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 1.2676e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.691531e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.247e0

VQSLOD
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DP
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 888
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
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Latino
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allele count: 36
allele frequency: 3.12771503040834e-3
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66208
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.674464e6

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.429e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.243e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 9.658103148541626e-5
allele num: 10354
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15692
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66182
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.669797e6

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -7.18e-1

FS
type: SiteQuality
SIO_000300: 3.714e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.15e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10350
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66134
num of homozygotes: 0

ClippingRankSum
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MQ
type: SiteQuality
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VQSLOD
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DP
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InbreedingCoeff
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QD
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6522
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European (Non-Finnish)
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allele frequency: 1.51285930408472e-5
allele num: 66100
num of homozygotes: 0

African
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East Asian
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Other
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allele num: 886
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South Asian
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num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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FS
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MQ
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11406
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.043954705953975e-5
allele num: 65704
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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MQ
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ClippingRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Other
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East Asian
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South Asian
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Latino
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allele frequency: 1.761183515322297e-4
allele num: 11356
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65524
num of homozygotes: 0

African
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InbreedingCoeff
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VQSLOD
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DP
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ReadPosRankSum
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MQ
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QD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6414
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African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531112199902009e-5
allele num: 65312
num of homozygotes: 0

Other
type: Population
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allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.484994e6

MQRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

FS
type: SiteQuality
SIO_000300: 3.15e0

QD
type: SiteQuality
SIO_000300: 1.202e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

GenotypeQuality
all individuals: 3032
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5411
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15539
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2950
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 6
allele frequency: 5.920663114268798e-4
allele num: 10134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13968
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-2

DP
type: SiteQuality
SIO_000300: 1.383017e6

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 1.33e1

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.435e0

GenotypeQuality
all individuals: 6138
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1825
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1625
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.97667523225934e-4
allele num: 10118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64550
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.366179e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

QD
type: SiteQuality
SIO_000300: 9.58e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

GenotypeQuality
all individuals: 245
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8759
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2404
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2840
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.779606e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.112e0

FS
type: SiteQuality
SIO_000300: 1.668e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.85e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

GenotypeQuality
all individuals: 720
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8774
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

QD
type: SiteQuality
SIO_000300: 1.356e1

DP
type: SiteQuality
SIO_000300: 1.780798e6

VQSLOD
type: SiteQuality
SIO_000300: 6.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.107e0

GenotypeQuality
all individuals: 1400
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2749
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.848374061958822e-4
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.934e1

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 1.356e1

DP
type: SiteQuality
SIO_000300: 1.782723e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.654e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeQuality
all individuals: 37655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.256e0

VQSLOD
type: SiteQuality
SIO_000300: -2.002e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.02e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 1.939e0

QD
type: SiteQuality
SIO_000300: 4.58e0

DP
type: SiteQuality
SIO_000300: 1.784355e6

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 8778
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2709
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4471
bin: 9.75e1
variant carriers: 136

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502042778178322e-5
allele num: 66576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 126
allele frequency: 1.456984273820537e-2
allele num: 8648
num of homozygotes: 2

South Asian
type: Population
allele count: 11
allele frequency: 6.700779727095516e-4
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.788947e6

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.725e0

VQSLOD
type: SiteQuality
SIO_000300: 6.24e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.25e1

GenotypeQuality
all individuals: 542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.510213890891612e-5
allele num: 66576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.725e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

DP
type: SiteQuality
SIO_000300: 1.788947e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.25e1

GenotypeQuality
all individuals: 253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 2353
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2720
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 1.481e0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.19e-1

DP
type: SiteQuality
SIO_000300: 1.784945e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

QD
type: SiteQuality
SIO_000300: 1.197e1

MQ
type: SiteQuality
SIO_000300: 5.92e1