13-111935470-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935470
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935470
    reference: chr 13
allele count: 1
allele frequency: 4.30551967622492e-5
allele num: 23226
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1480-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1255-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1255-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1726-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1510-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1255-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1255-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*132-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1021-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1789-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.296T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1255-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*678-16T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1639-16T>C
  variant of: http://identifiers.org/hgnc/15607
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

13-111935471-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935471
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935471
    reference: chr 13
allele count: 1
allele frequency: 4.265847623922873e-5
allele num: 23442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1255-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1021-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1255-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1255-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1639-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*132-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1255-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.297C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1255-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1480-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1510-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*678-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1789-15C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1726-15C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

13-111935477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935477
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935477
    reference: chr 13
allele count: 1
allele frequency: 3.89529448426301e-5
allele num: 25672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1255-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.303C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*678-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1021-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1480-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1726-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1255-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1255-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1639-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1255-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*132-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1510-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1789-9C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1255-9C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15198
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

13-111935478-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935478
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935478
    reference: chr 13
allele count: 1
allele frequency: 3.866976024748646e-5
allele num: 25860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1021-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1255-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1639-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1510-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1789-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*678-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1255-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1480-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1726-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1255-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*132-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1255-8C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.304C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1255-8C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14889
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1789-8C>T
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

13-111935491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935491
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935491
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 30874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1731C>T
  hgvsp: ENST00000317133.5:c.1731C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1794C>T
  hgvsp: ENST00000375741.2:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1026C>T
  hgvsp: ENST00000478679.1:c.1026C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1260C>T
  hgvsp: ENST00000375736.4:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1515C>T
  hgvsp: ENST00000370623.3:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1260C>T
  hgvsp: ENST00000466143.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1260C>T
  hgvsp: ENST00000218789.5:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1485C>T
  hgvsp: ENST00000375737.5:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1644C>T
  hgvsp: ENST00000375739.2:c.1644C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1260C>T
  hgvsp: ENST00000375723.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1260C>T
  hgvsp: ENST00000426073.2:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.317C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*137C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*683C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33236
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro598Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-111935494-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935494
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935494
    reference: chr 13
allele count: 1
allele frequency: 3.11100049776008e-5
allele num: 32144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1518C>T
  hgvsp: ENST00000370623.3:c.1518C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1488C>T
  hgvsp: ENST00000375737.5:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1647C>T
  hgvsp: ENST00000375739.2:c.1647C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*140C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1734C>T
  hgvsp: ENST00000317133.5:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1029C>T
  hgvsp: ENST00000478679.1:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1797C>T
  hgvsp: ENST00000375741.2:c.1797C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1263C>T
  hgvsp: ENST00000218789.5:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*686C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1263C>T
  hgvsp: ENST00000426073.2:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1263C>T
  hgvsp: ENST00000375736.4:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1263C>T
  hgvsp: ENST00000375723.1:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1263C>T
  hgvsp: ENST00000466143.1:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.320C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser599Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

13-111935499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935499
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935499
    reference: chr 13
allele count: 2
allele frequency: 5.868544600938967e-5
allele num: 34080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1268C>T
  hgvsp: ENSP00000397068.2:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1523C>T
  hgvsp: ENSP00000359657.3:p.Pro508Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1739C>T
  hgvsp: ENSP00000325994.5:p.Pro580Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1652C>T
  hgvsp: ENSP00000364891.2:p.Pro551Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*145C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.325C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1268C>T
  hgvsp: ENSP00000218789.5:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1034C>T
  hgvsp: ENSP00000417596.1:p.Pro345Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1268C>T
  hgvsp: ENSP00000364888.4:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1268C>T
  hgvsp: ENSP00000364875.1:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1802C>T
  hgvsp: ENSP00000364893.2:p.Pro601Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1493C>T
  hgvsp: ENSP00000364889.5:p.Pro498Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1268C>T
  hgvsp: ENSP00000418067.1:p.Pro423Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*691C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro601Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

13-111935500-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935500
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935500
    reference: chr 13
allele count: 1
allele frequency: 2.880184331797235e-5
allele num: 34720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.326G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*146G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1269G>A
  hgvsp: ENST00000375736.4:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1524G>A
  hgvsp: ENST00000370623.3:c.1524G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1269G>A
  hgvsp: ENST00000375723.1:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1803G>A
  hgvsp: ENST00000375741.2:c.1803G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1494G>A
  hgvsp: ENST00000375737.5:c.1494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1035G>A
  hgvsp: ENST00000478679.1:c.1035G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1269G>A
  hgvsp: ENST00000466143.1:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1740G>A
  hgvsp: ENST00000317133.5:c.1740G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*692G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1653G>A
  hgvsp: ENST00000375739.2:c.1653G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1269G>A
  hgvsp: ENST00000218789.5:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1269G>A
  hgvsp: ENST00000426073.2:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro601Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

13-111935508-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935508
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935508
    reference: chr 13
allele count: 1
allele frequency: 2.619995808006707e-5
allele num: 38168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1661C>T
  hgvsp: ENSP00000364891.2:p.Pro554Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1748C>T
  hgvsp: ENSP00000325994.5:p.Pro583Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1502C>T
  hgvsp: ENSP00000364889.5:p.Pro501Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1043C>T
  hgvsp: ENSP00000417596.1:p.Pro348Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1277C>T
  hgvsp: ENSP00000364888.4:p.Pro426Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1277C>T
  hgvsp: ENSP00000364875.1:p.Pro426Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*154C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1811C>T
  hgvsp: ENSP00000364893.2:p.Pro604Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1532C>T
  hgvsp: ENSP00000359657.3:p.Pro511Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1277C>T
  hgvsp: ENSP00000397068.2:p.Pro426Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.334C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*700C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1277C>T
  hgvsp: ENSP00000418067.1:p.Pro426Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1277C>T
  hgvsp: ENSP00000218789.5:p.Pro426Leu
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7711
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro604Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

13-111935509-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935509
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935509
    reference: chr 13
allele count: 2
allele frequency: 5.158095631093001e-5
allele num: 38774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*701G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1278G>A
  hgvsp: ENST00000375736.4:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.335G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1503G>A
  hgvsp: ENST00000375737.5:c.1503G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1533G>A
  hgvsp: ENST00000370623.3:c.1533G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1044G>A
  hgvsp: ENST00000478679.1:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1278G>A
  hgvsp: ENST00000218789.5:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1812G>A
  hgvsp: ENST00000375741.2:c.1812G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1278G>A
  hgvsp: ENST00000426073.2:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1278G>A
  hgvsp: ENST00000466143.1:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1662G>A
  hgvsp: ENST00000375739.2:c.1662G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1278G>A
  hgvsp: ENST00000375723.1:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1749G>A
  hgvsp: ENST00000317133.5:c.1749G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*155G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32935
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro604Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

13-111935511-C-CCAGCAAGCACGCAGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935511
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935526
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 39894
alternate allele: CCAGCAAGCACGCAGA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsp: ENSP00000364891.2:p.His558_Lys562dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsp: ENSP00000417596.1:p.His352_Lys356dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsp: ENSP00000325994.5:p.His587_Lys591dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsp: ENSP00000218789.5:p.His430_Lys434dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsp: ENSP00000418067.1:p.His430_Lys434dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsp: ENSP00000364888.4:p.His430_Lys434dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsp: ENSP00000364889.5:p.His505_Lys509dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsp: ENSP00000397068.2:p.His430_Lys434dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsp: ENSP00000364875.1:p.His430_Lys434dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsp: ENSP00000359657.3:p.His515_Lys519dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsp: ENSP00000364893.2:p.His608_Lys612dup
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 5378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His608_Lys612dup
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

13-111935518-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935518
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935518
    reference: chr 13
allele count: 42
allele frequency: 9.942240318151689e-4
allele num: 42244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1671G>A
  hgvsp: ENST00000375739.2:c.1671G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1053G>A
  hgvsp: ENST00000478679.1:c.1053G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1287G>A
  hgvsp: ENST00000375736.4:c.1287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1287G>A
  hgvsp: ENST00000466143.1:c.1287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1287G>A
  hgvsp: ENST00000426073.2:c.1287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1542G>A
  hgvsp: ENST00000370623.3:c.1542G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.344G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1821G>A
  hgvsp: ENST00000375741.2:c.1821G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1512G>A
  hgvsp: ENST00000375737.5:c.1512G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*164G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1287G>A
  hgvsp: ENST00000218789.5:c.1287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1287G>A
  hgvsp: ENST00000375723.1:c.1287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1758G>A
  hgvsp: ENST00000317133.5:c.1758G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*710G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 32219
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10060
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys607Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

13-111935521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935521
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935521
    reference: chr 13
allele count: 3
allele frequency: 6.960233863857825e-5
allele num: 43102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1674C>T
  hgvsp: ENST00000375739.2:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*167C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1545C>T
  hgvsp: ENST00000370623.3:c.1545C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1824C>T
  hgvsp: ENST00000375741.2:c.1824C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1056C>T
  hgvsp: ENST00000478679.1:c.1056C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1761C>T
  hgvsp: ENST00000317133.5:c.1761C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1515C>T
  hgvsp: ENST00000375737.5:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1290C>T
  hgvsp: ENST00000426073.2:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1290C>T
  hgvsp: ENST00000375736.4:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1290C>T
  hgvsp: ENST00000218789.5:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1290C>T
  hgvsp: ENST00000375723.1:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*713C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.347C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1290C>T
  hgvsp: ENST00000466143.1:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31883
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5844
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His608His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

13-111935524-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935524
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935524
    reference: chr 13
allele count: 1
allele frequency: 2.254384778393976e-5
allele num: 44358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1293A>G
  hgvsp: ENST00000375723.1:c.1293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1293A>G
  hgvsp: ENST00000218789.5:c.1293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1677A>G
  hgvsp: ENST00000375739.2:c.1677A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1548A>G
  hgvsp: ENST00000370623.3:c.1548A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1059A>G
  hgvsp: ENST00000478679.1:c.1059A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1518A>G
  hgvsp: ENST00000375737.5:c.1518A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1764A>G
  hgvsp: ENST00000317133.5:c.1764A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1827A>G
  hgvsp: ENST00000375741.2:c.1827A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*170A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*716A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1293A>G
  hgvsp: ENST00000375736.4:c.1293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1293A>G
  hgvsp: ENST00000466143.1:c.1293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.350A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1293A>G
  hgvsp: ENST00000426073.2:c.1293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10346
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31563
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala609Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

13-111935536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935536
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935536
    reference: chr 13
allele count: 250
allele frequency: 5.458038599248973e-3
allele num: 45804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1305C>T
  hgvsp: ENST00000375723.1:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1305C>T
  hgvsp: ENST00000466143.1:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1071C>T
  hgvsp: ENST00000478679.1:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*182C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1530C>T
  hgvsp: ENST00000375737.5:c.1530C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1689C>T
  hgvsp: ENST00000375739.2:c.1689C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.362C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1305C>T
  hgvsp: ENST00000375736.4:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1560C>T
  hgvsp: ENST00000370623.3:c.1560C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1839C>T
  hgvsp: ENST00000375741.2:c.1839C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1305C>T
  hgvsp: ENST00000426073.2:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1305C>T
  hgvsp: ENST00000218789.5:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1776C>T
  hgvsp: ENST00000317133.5:c.1776C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*728C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 1.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 30541
  bin: 7.5e0
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9827
  bin: 2.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 6075
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
hgvs: p.Pro613Pro
num of homozygotes: 5
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-111935538-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935538
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935538
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 45514
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1532C>T
  hgvsp: ENSP00000364889.5:p.Ala511Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1307C>T
  hgvsp: ENSP00000218789.5:p.Ala436Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*730C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1691C>T
  hgvsp: ENSP00000364891.2:p.Ala564Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*184C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1562C>T
  hgvsp: ENSP00000359657.3:p.Ala521Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1307C>T
  hgvsp: ENSP00000364888.4:p.Ala436Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1841C>T
  hgvsp: ENSP00000364893.2:p.Ala614Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1778C>T
  hgvsp: ENSP00000325994.5:p.Ala593Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.364C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1307C>T
  hgvsp: ENSP00000364875.1:p.Ala436Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1307C>T
  hgvsp: ENSP00000397068.2:p.Ala436Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1073C>T
  hgvsp: ENSP00000417596.1:p.Ala358Val
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1307C>T
  hgvsp: ENSP00000418067.1:p.Ala436Val
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30505
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala614Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

13-111935539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935539
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935539
    reference: chr 13
allele count: 4
allele frequency: 8.743169398907104e-5
allele num: 45750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1779G>A
  hgvsp: ENST00000317133.5:c.1779G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1308G>A
  hgvsp: ENST00000466143.1:c.1308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.365G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*731G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1308G>A
  hgvsp: ENST00000426073.2:c.1308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1308G>A
  hgvsp: ENST00000218789.5:c.1308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1074G>A
  hgvsp: ENST00000478679.1:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1308G>A
  hgvsp: ENST00000375736.4:c.1308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1308G>A
  hgvsp: ENST00000375723.1:c.1308G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1692G>A
  hgvsp: ENST00000375739.2:c.1692G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1563G>A
  hgvsp: ENST00000370623.3:c.1563G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1533G>A
  hgvsp: ENST00000375737.5:c.1533G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*185G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1842G>A
  hgvsp: ENST00000375741.2:c.1842G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30456
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7138
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala614Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/13-111935541-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935541
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935541
    reference: chr 13
allele count: 1
allele frequency: 2.189333566862247e-5
allele num: 45676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1535C>A
  hgvsp: ENSP00000364889.5:p.Pro512Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1310C>A
  hgvsp: ENSP00000364888.4:p.Pro437Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1694C>A
  hgvsp: ENSP00000364891.2:p.Pro565Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*187C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1565C>A
  hgvsp: ENSP00000359657.3:p.Pro522Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1781C>A
  hgvsp: ENSP00000325994.5:p.Pro594Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1310C>A
  hgvsp: ENSP00000218789.5:p.Pro437Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1310C>A
  hgvsp: ENSP00000418067.1:p.Pro437Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1076C>A
  hgvsp: ENSP00000417596.1:p.Pro359Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1844C>A
  hgvsp: ENSP00000364893.2:p.Pro615Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*733C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1310C>A
  hgvsp: ENSP00000364875.1:p.Pro437Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.367C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1310C>A
  hgvsp: ENSP00000397068.2:p.Pro437Gln
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro615Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-111935541-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935541
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935541
    reference: chr 13
allele count: 11
allele frequency: 2.408266923548472e-4
allele num: 45676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1310C>T
  hgvsp: ENSP00000397068.2:p.Pro437Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1565C>T
  hgvsp: ENSP00000359657.3:p.Pro522Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1310C>T
  hgvsp: ENSP00000218789.5:p.Pro437Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1781C>T
  hgvsp: ENSP00000325994.5:p.Pro594Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1310C>T
  hgvsp: ENSP00000364888.4:p.Pro437Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1844C>T
  hgvsp: ENSP00000364893.2:p.Pro615Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*733C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1310C>T
  hgvsp: ENSP00000418067.1:p.Pro437Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1694C>T
  hgvsp: ENSP00000364891.2:p.Pro565Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1535C>T
  hgvsp: ENSP00000364889.5:p.Pro512Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1076C>T
  hgvsp: ENSP00000417596.1:p.Pro359Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1310C>T
  hgvsp: ENSP00000364875.1:p.Pro437Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.367C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*187C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7227
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro615Leu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-111935542-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935542
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935542
    reference: chr 13
allele count: 4
allele frequency: 8.759251959882626e-5
allele num: 45666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*188G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1536G>A
  hgvsp: ENST00000375737.5:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1077G>A
  hgvsp: ENST00000478679.1:c.1077G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1311G>A
  hgvsp: ENST00000375723.1:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1311G>A
  hgvsp: ENST00000466143.1:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1566G>A
  hgvsp: ENST00000370623.3:c.1566G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1311G>A
  hgvsp: ENST00000218789.5:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1782G>A
  hgvsp: ENST00000317133.5:c.1782G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.368G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1311G>A
  hgvsp: ENST00000426073.2:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1845G>A
  hgvsp: ENST00000375741.2:c.1845G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*734G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1311G>A
  hgvsp: ENST00000375736.4:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1695G>A
  hgvsp: ENST00000375739.2:c.1695G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30175
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9494
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro615Pro
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-111935542-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935542
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935542
    reference: chr 13
allele count: 2
allele frequency: 4.379625979941313e-5
allele num: 45666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1077G>T
  hgvsp: ENST00000478679.1:c.1077G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1566G>T
  hgvsp: ENST00000370623.3:c.1566G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.368G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*188G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*734G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1311G>T
  hgvsp: ENST00000218789.5:c.1311G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1311G>T
  hgvsp: ENST00000426073.2:c.1311G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1695G>T
  hgvsp: ENST00000375739.2:c.1695G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1311G>T
  hgvsp: ENST00000375736.4:c.1311G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1311G>T
  hgvsp: ENST00000466143.1:c.1311G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1536G>T
  hgvsp: ENST00000375737.5:c.1536G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1311G>T
  hgvsp: ENST00000375723.1:c.1311G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1845G>T
  hgvsp: ENST00000375741.2:c.1845G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1782G>T
  hgvsp: ENST00000317133.5:c.1782G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro615Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

13-111935547-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935547
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935547
    reference: chr 13
allele count: 1
allele frequency: 2.144082332761578e-5
allele num: 46640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1316C>T
  hgvsp: ENSP00000418067.1:p.Thr439Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1541C>T
  hgvsp: ENSP00000364889.5:p.Thr514Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.373C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1571C>T
  hgvsp: ENSP00000359657.3:p.Thr524Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1316C>T
  hgvsp: ENSP00000397068.2:p.Thr439Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1316C>T
  hgvsp: ENSP00000364888.4:p.Thr439Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1700C>T
  hgvsp: ENSP00000364891.2:p.Thr567Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1316C>T
  hgvsp: ENSP00000364875.1:p.Thr439Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1316C>T
  hgvsp: ENSP00000218789.5:p.Thr439Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1082C>T
  hgvsp: ENSP00000417596.1:p.Thr361Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1850C>T
  hgvsp: ENSP00000364893.2:p.Thr617Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*193C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1787C>T
  hgvsp: ENSP00000325994.5:p.Thr596Met
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*739C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30028
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr617Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

13-111935548-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935548
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935548
    reference: chr 13
allele count: 40
allele frequency: 8.589958338702057e-4
allele num: 46566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1572G>A
  hgvsp: ENST00000370623.3:c.1572G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1542G>A
  hgvsp: ENST00000375737.5:c.1542G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1701G>A
  hgvsp: ENST00000375739.2:c.1701G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1788G>A
  hgvsp: ENST00000317133.5:c.1788G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1851G>A
  hgvsp: ENST00000375741.2:c.1851G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*194G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1317G>A
  hgvsp: ENST00000375723.1:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1317G>A
  hgvsp: ENST00000375736.4:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1083G>A
  hgvsp: ENST00000478679.1:c.1083G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1317G>A
  hgvsp: ENST00000466143.1:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1317G>A
  hgvsp: ENST00000218789.5:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*740G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.374G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1317G>A
  hgvsp: ENST00000426073.2:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29961
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
hgvs: p.Thr617Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

13-111935551-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935551
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935551
    reference: chr 13
allele count: 2
allele frequency: 4.187604690117253e-5
allele num: 47760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1086C>T
  hgvsp: ENST00000478679.1:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1575C>T
  hgvsp: ENST00000370623.3:c.1575C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*743C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.377C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1791C>T
  hgvsp: ENST00000317133.5:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*197C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1320C>T
  hgvsp: ENST00000218789.5:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1320C>T
  hgvsp: ENST00000466143.1:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1320C>T
  hgvsp: ENST00000375736.4:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1320C>T
  hgvsp: ENST00000426073.2:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1545C>T
  hgvsp: ENST00000375737.5:c.1545C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1854C>T
  hgvsp: ENST00000375741.2:c.1854C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1320C>T
  hgvsp: ENST00000375723.1:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1704C>T
  hgvsp: ENST00000375739.2:c.1704C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29765
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro618Pro
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

13-111935552-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935552
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935552
    reference: chr 13
allele count: 1
allele frequency: 2.105972538118103e-5
allele num: 47484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1576G>A
  hgvsp: ENSP00000359657.3:p.Ala526Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1321G>A
  hgvsp: ENSP00000364888.4:p.Ala441Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1792G>A
  hgvsp: ENSP00000325994.5:p.Ala598Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1321G>A
  hgvsp: ENSP00000364875.1:p.Ala441Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1087G>A
  hgvsp: ENSP00000417596.1:p.Ala363Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.378G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1546G>A
  hgvsp: ENSP00000364889.5:p.Ala516Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*198G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1321G>A
  hgvsp: ENSP00000397068.2:p.Ala441Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1705G>A
  hgvsp: ENSP00000364891.2:p.Ala569Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1321G>A
  hgvsp: ENSP00000218789.5:p.Ala441Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1321G>A
  hgvsp: ENSP00000418067.1:p.Ala441Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1855G>A
  hgvsp: ENSP00000364893.2:p.Ala619Thr
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*744G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10070
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala619Thr
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

13-111935552-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935552
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935552
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 47484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1321G>T
  hgvsp: ENSP00000364888.4:p.Ala441Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1855G>T
  hgvsp: ENSP00000364893.2:p.Ala619Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1576G>T
  hgvsp: ENSP00000359657.3:p.Ala526Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1321G>T
  hgvsp: ENSP00000364875.1:p.Ala441Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1321G>T
  hgvsp: ENSP00000218789.5:p.Ala441Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1087G>T
  hgvsp: ENSP00000417596.1:p.Ala363Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*198G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1546G>T
  hgvsp: ENSP00000364889.5:p.Ala516Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1321G>T
  hgvsp: ENSP00000418067.1:p.Ala441Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1705G>T
  hgvsp: ENSP00000364891.2:p.Ala569Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1792G>T
  hgvsp: ENSP00000325994.5:p.Ala598Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1321G>T
  hgvsp: ENSP00000397068.2:p.Ala441Ser
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.378G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*744G>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29564
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala619Ser
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

13-111935557-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935557
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935557
    reference: chr 13
allele count: 2
allele frequency: 4.170489615480858e-5
allele num: 47956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1797C>T
  hgvsp: ENST00000317133.5:c.1797C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1326C>T
  hgvsp: ENST00000375723.1:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1581C>T
  hgvsp: ENST00000370623.3:c.1581C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*749C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*203C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1551C>T
  hgvsp: ENST00000375737.5:c.1551C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1710C>T
  hgvsp: ENST00000375739.2:c.1710C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1326C>T
  hgvsp: ENST00000466143.1:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1092C>T
  hgvsp: ENST00000478679.1:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1326C>T
  hgvsp: ENST00000375736.4:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1860C>T
  hgvsp: ENST00000375741.2:c.1860C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.383C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1326C>T
  hgvsp: ENST00000426073.2:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1326C>T
  hgvsp: ENST00000218789.5:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8399
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr620Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-111935566-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935566
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935566
    reference: chr 13
allele count: 3
allele frequency: 6.359435282146946e-5
allele num: 47174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1335G>A
  hgvsp: ENST00000218789.5:c.1335G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1335G>A
  hgvsp: ENST00000375736.4:c.1335G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1335G>A
  hgvsp: ENST00000375723.1:c.1335G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1590G>A
  hgvsp: ENST00000370623.3:c.1590G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1335G>A
  hgvsp: ENST00000426073.2:c.1335G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1335G>A
  hgvsp: ENST00000466143.1:c.1335G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1560G>A
  hgvsp: ENST00000375737.5:c.1560G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1101G>A
  hgvsp: ENST00000478679.1:c.1101G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1719G>A
  hgvsp: ENST00000375739.2:c.1719G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.392G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*212G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1869G>A
  hgvsp: ENST00000375741.2:c.1869G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*758G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1806G>A
  hgvsp: ENST00000317133.5:c.1806G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9046
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu623Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

13-111935569-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935569
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935569
    reference: chr 13
allele count: 1
allele frequency: 2.161788231224869e-5
allele num: 46258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418067
  ensembl transcript: ENST00000466143
  gene symbol: ARHGEF7
  hgvsc: ENST00000466143.1:c.1338C>G
  hgvsp: ENST00000466143.1:c.1338C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1338C>G
  hgvsp: ENST00000426073.2:c.1338C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.395C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1338C>G
  hgvsp: ENST00000375736.4:c.1338C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1593C>G
  hgvsp: ENST00000370623.3:c.1593C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1338C>G
  hgvsp: ENST00000375723.1:c.1338C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1722C>G
  hgvsp: ENST00000375739.2:c.1722C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1104C>G
  hgvsp: ENST00000478679.1:c.1104C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*761C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*215C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1563C>G
  hgvsp: ENST00000375737.5:c.1563C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1338C>G
  hgvsp: ENST00000218789.5:c.1338C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1809C>G
  hgvsp: ENST00000317133.5:c.1809C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1872C>G
  hgvsp: ENST00000375741.2:c.1872C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro624Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

13-111935575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935575
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935575
    reference: chr 13
allele count: 1
allele frequency: 2.163940102137973e-5
allele num: 46212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1569C>T
  hgvsp: ENST00000375737.5:c.1569C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.401C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1599C>T
  hgvsp: ENST00000370623.3:c.1599C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1728C>T
  hgvsp: ENST00000375739.2:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1344C>T
  hgvsp: ENST00000426073.2:c.1344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1110C>T
  hgvsp: ENST00000478679.1:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*221C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1344C>T
  hgvsp: ENST00000218789.5:c.1344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1878C>T
  hgvsp: ENST00000375741.2:c.1878C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1344C>T
  hgvsp: ENST00000375736.4:c.1344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*767C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1344C>T
  hgvsp: ENST00000375723.1:c.1344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1815C>T
  hgvsp: ENST00000317133.5:c.1815C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro626Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

13-111935581-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935581
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935581
    reference: chr 13
allele count: 1
allele frequency: 2.25713253882268e-5
allele num: 44304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1350C>T
  hgvsp: ENST00000375723.1:c.1350C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1821C>T
  hgvsp: ENST00000317133.5:c.1821C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*227C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1116C>T
  hgvsp: ENST00000478679.1:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1605C>T
  hgvsp: ENST00000370623.3:c.1605C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1575C>T
  hgvsp: ENST00000375737.5:c.1575C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.407C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*773C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1884C>T
  hgvsp: ENST00000375741.2:c.1884C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1350C>T
  hgvsp: ENST00000375736.4:c.1350C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1734C>T
  hgvsp: ENST00000375739.2:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1350C>T
  hgvsp: ENST00000218789.5:c.1350C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1350C>T
  hgvsp: ENST00000426073.2:c.1350C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7621
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His628His
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

13-111935581-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935581
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935581
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 44304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.407C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1350C>G
  hgvsp: ENSP00000397068.2:p.His450Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1605C>G
  hgvsp: ENSP00000359657.3:p.His535Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1350C>G
  hgvsp: ENSP00000364888.4:p.His450Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*773C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*227C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1575C>G
  hgvsp: ENSP00000364889.5:p.His525Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1116C>G
  hgvsp: ENSP00000417596.1:p.His372Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1734C>G
  hgvsp: ENSP00000364891.2:p.His578Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1350C>G
  hgvsp: ENSP00000218789.5:p.His450Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1821C>G
  hgvsp: ENSP00000325994.5:p.His607Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1350C>G
  hgvsp: ENSP00000364875.1:p.His450Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1884C>G
  hgvsp: ENSP00000364893.2:p.His628Gln
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 7621
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29408
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His628Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

13-111935584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935584
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935584
    reference: chr 13
allele count: 1
allele frequency: 2.28320927896251e-5
allele num: 43798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1578C>T
  hgvsp: ENST00000375737.5:c.1578C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1353C>T
  hgvsp: ENST00000375736.4:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1353C>T
  hgvsp: ENST00000218789.5:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1353C>T
  hgvsp: ENST00000375723.1:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1608C>T
  hgvsp: ENST00000370623.3:c.1608C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1824C>T
  hgvsp: ENST00000317133.5:c.1824C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1353C>T
  hgvsp: ENST00000426073.2:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1887C>T
  hgvsp: ENST00000375741.2:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.410C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1737C>T
  hgvsp: ENST00000375739.2:c.1737C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1119C>T
  hgvsp: ENST00000478679.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*230C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*776C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29469
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9406
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His629His
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/13-111935589-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935589
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935589
    reference: chr 13
allele count: 1
allele frequency: 2.301072299691656e-5
allele num: 43458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1583C>A
  hgvsp: ENSP00000364889.5:p.Thr528Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1358C>A
  hgvsp: ENSP00000364875.1:p.Thr453Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*235C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1358C>A
  hgvsp: ENSP00000364888.4:p.Thr453Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1124C>A
  hgvsp: ENSP00000417596.1:p.Thr375Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1613C>A
  hgvsp: ENSP00000359657.3:p.Thr538Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1829C>A
  hgvsp: ENSP00000325994.5:p.Thr610Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1358C>A
  hgvsp: ENSP00000218789.5:p.Thr453Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1742C>A
  hgvsp: ENSP00000364891.2:p.Thr581Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.415C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1358C>A
  hgvsp: ENSP00000397068.2:p.Thr453Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*781C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1892C>A
  hgvsp: ENSP00000364893.2:p.Thr631Asn
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7931
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr631Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

13-111935590-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935590
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935590
    reference: chr 13
allele count: 2
allele frequency: 4.603627658594973e-5
allele num: 43444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*782C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1359C>G
  hgvsp: ENST00000426073.2:c.1359C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1359C>G
  hgvsp: ENST00000375736.4:c.1359C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1743C>G
  hgvsp: ENST00000375739.2:c.1743C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1584C>G
  hgvsp: ENST00000375737.5:c.1584C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1125C>G
  hgvsp: ENST00000478679.1:c.1125C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1614C>G
  hgvsp: ENST00000370623.3:c.1614C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1359C>G
  hgvsp: ENST00000218789.5:c.1359C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1830C>G
  hgvsp: ENST00000317133.5:c.1830C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*236C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1359C>G
  hgvsp: ENST00000375723.1:c.1359C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.416C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1893C>G
  hgvsp: ENST00000375741.2:c.1893C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr631Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

13-111935592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935592
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935592
    reference: chr 13
allele count: 2
allele frequency: 4.697702823319397e-5
allele num: 42574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*238C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1745C>T
  hgvsp: ENSP00000364891.2:p.Pro582Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1832C>T
  hgvsp: ENSP00000325994.5:p.Pro611Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1361C>T
  hgvsp: ENSP00000397068.2:p.Pro454Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1586C>T
  hgvsp: ENSP00000364889.5:p.Pro529Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1616C>T
  hgvsp: ENSP00000359657.3:p.Pro539Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1361C>T
  hgvsp: ENSP00000364888.4:p.Pro454Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1361C>T
  hgvsp: ENSP00000218789.5:p.Pro454Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1127C>T
  hgvsp: ENSP00000417596.1:p.Pro376Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1895C>T
  hgvsp: ENSP00000364893.2:p.Pro632Leu
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*784C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.418C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1361C>T
  hgvsp: ENSP00000364875.1:p.Pro454Leu
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9138
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29773
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro632Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

13-111935593-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935593
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935593
    reference: chr 13
allele count: 3
allele frequency: 7.165034631000717e-5
allele num: 41870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1617G>A
  hgvsp: ENST00000370623.3:c.1617G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1833G>A
  hgvsp: ENST00000317133.5:c.1833G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1362G>A
  hgvsp: ENST00000375736.4:c.1362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1362G>A
  hgvsp: ENST00000426073.2:c.1362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*239G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1587G>A
  hgvsp: ENST00000375737.5:c.1587G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1896G>A
  hgvsp: ENST00000375741.2:c.1896G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1128G>A
  hgvsp: ENST00000478679.1:c.1128G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1746G>A
  hgvsp: ENST00000375739.2:c.1746G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*785G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.419G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1362G>A
  hgvsp: ENST00000375723.1:c.1362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1362G>A
  hgvsp: ENST00000218789.5:c.1362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9168
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29820
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8012
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro632Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

http://identifiers.org/exac.variant/13-111935616-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935616
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935616
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 38866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.442C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1769C>A
  hgvsp: ENSP00000364891.2:p.Pro590His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*262C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1385C>A
  hgvsp: ENSP00000218789.5:p.Pro462His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1919C>A
  hgvsp: ENSP00000364893.2:p.Pro640His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1151C>A
  hgvsp: ENSP00000417596.1:p.Pro384His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1856C>A
  hgvsp: ENSP00000325994.5:p.Pro619His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1385C>A
  hgvsp: ENSP00000364888.4:p.Pro462His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1610C>A
  hgvsp: ENSP00000364889.5:p.Pro537His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*808C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1640C>A
  hgvsp: ENSP00000359657.3:p.Pro547His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1385C>A
  hgvsp: ENSP00000397068.2:p.Pro462His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1385C>A
  hgvsp: ENSP00000364875.1:p.Pro462His
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30181
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9944
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro640His
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

13-111935629-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935629
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935629
    reference: chr 13
allele count: 1
allele frequency: 2.786602017499861e-5
allele num: 35886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.455G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1623G>A
  hgvsp: ENST00000375737.5:c.1623G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000445384
  ensembl transcript: ENST00000544132
  gene symbol: ARHGEF7
  hgvsc: ENST00000544132.1:c.*275G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1398G>A
  hgvsp: ENST00000375723.1:c.1398G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1869G>A
  hgvsp: ENST00000317133.5:c.1869G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1932G>A
  hgvsp: ENST00000375741.2:c.1932G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1164G>A
  hgvsp: ENST00000478679.1:c.1164G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1398G>A
  hgvsp: ENST00000375736.4:c.1398G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1782G>A
  hgvsp: ENST00000375739.2:c.1782G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1653G>A
  hgvsp: ENST00000370623.3:c.1653G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000418235
  ensembl transcript: ENST00000469877
  gene symbol: ARHGEF7
  hgvsc: ENST00000469877.1:c.*821G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1398G>A
  hgvsp: ENST00000426073.2:c.1398G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1398G>A
  hgvsp: ENST00000218789.5:c.1398G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro644Pro
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

13-111935655-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935655
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935655
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 31624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.481G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1424G>A
  hgvsp: ENSP00000364888.4:p.Ser475Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1679G>A
  hgvsp: ENSP00000359657.3:p.Ser560Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1424G>A
  hgvsp: ENSP00000218789.5:p.Ser475Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1958G>A
  hgvsp: ENSP00000364893.2:p.Ser653Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1895G>A
  hgvsp: ENSP00000325994.5:p.Ser632Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1649G>A
  hgvsp: ENSP00000364889.5:p.Ser550Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1190G>A
  hgvsp: ENSP00000417596.1:p.Ser397Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1808G>A
  hgvsp: ENSP00000364891.2:p.Ser603Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1424G>A
  hgvsp: ENSP00000364875.1:p.Ser475Asn
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1424G>A
  hgvsp: ENSP00000397068.2:p.Ser475Asn
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25511
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17850
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser653Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD

13-111935658-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935658
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935658
    reference: chr 13
allele count: 1
allele frequency: 3.18694626808592e-5
allele num: 31378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1193G>T
  hgvsp: ENSP00000417596.1:p.Cys398Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1427G>T
  hgvsp: ENSP00000397068.2:p.Cys476Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1811G>T
  hgvsp: ENSP00000364891.2:p.Cys604Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1961G>T
  hgvsp: ENSP00000364893.2:p.Cys654Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1427G>T
  hgvsp: ENSP00000364875.1:p.Cys476Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1652G>T
  hgvsp: ENSP00000364889.5:p.Cys551Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1427G>T
  hgvsp: ENSP00000218789.5:p.Cys476Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1682G>T
  hgvsp: ENSP00000359657.3:p.Cys561Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1427G>T
  hgvsp: ENSP00000364888.4:p.Cys476Phe
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.484G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1898G>T
  hgvsp: ENSP00000325994.5:p.Cys633Phe
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6327
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys654Phe
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

13-111935665-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935665
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935665
    reference: chr 13
allele count: 4
allele frequency: 1.401443486791395e-4
allele num: 28542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1200G>A
  hgvsp: ENST00000478679.1:c.1200G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1968G>A
  hgvsp: ENST00000375741.2:c.1968G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1818G>A
  hgvsp: ENST00000375739.2:c.1818G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1689G>A
  hgvsp: ENST00000370623.3:c.1689G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1434G>A
  hgvsp: ENST00000375736.4:c.1434G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1434G>A
  hgvsp: ENST00000218789.5:c.1434G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1659G>A
  hgvsp: ENST00000375737.5:c.1659G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.491G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1434G>A
  hgvsp: ENST00000375723.1:c.1434G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1434G>A
  hgvsp: ENST00000426073.2:c.1434G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1905G>A
  hgvsp: ENST00000317133.5:c.1905G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21580
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22963
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg656Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

13-111935665-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935665
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935665
    reference: chr 13
allele count: 1
allele frequency: 3.503608716978488e-5
allele num: 28542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.491G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1968G>T
  hgvsp: ENST00000375741.2:c.1968G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1905G>T
  hgvsp: ENST00000317133.5:c.1905G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1689G>T
  hgvsp: ENST00000370623.3:c.1689G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1659G>T
  hgvsp: ENST00000375737.5:c.1659G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1818G>T
  hgvsp: ENST00000375739.2:c.1818G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1200G>T
  hgvsp: ENST00000478679.1:c.1200G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1434G>T
  hgvsp: ENST00000375736.4:c.1434G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1434G>T
  hgvsp: ENST00000218789.5:c.1434G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1434G>T
  hgvsp: ENST00000426073.2:c.1434G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1434G>T
  hgvsp: ENST00000375723.1:c.1434G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg656Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

13-111935668-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935668
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935668
    reference: chr 13
allele count: 16
allele frequency: 5.850947122065384e-4
allele num: 27346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1437C>T
  hgvsp: ENST00000218789.5:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1821C>T
  hgvsp: ENST00000375739.2:c.1821C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1908C>T
  hgvsp: ENST00000317133.5:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1437C>T
  hgvsp: ENST00000375723.1:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1437C>T
  hgvsp: ENST00000426073.2:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1662C>T
  hgvsp: ENST00000375737.5:c.1662C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1203C>T
  hgvsp: ENST00000478679.1:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.494C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1971C>T
  hgvsp: ENST00000375741.2:c.1971C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1692C>T
  hgvsp: ENST00000370623.3:c.1692C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1437C>T
  hgvsp: ENST00000375736.4:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22812
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22126
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro657Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

13-111935671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935671
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935671
    reference: chr 13
allele count: 54
allele frequency: 2.011772595186648e-3
allele num: 26842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1695G>A
  hgvsp: ENST00000370623.3:c.1695G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1206G>A
  hgvsp: ENST00000478679.1:c.1206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1440G>A
  hgvsp: ENST00000375736.4:c.1440G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1824G>A
  hgvsp: ENST00000375739.2:c.1824G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1911G>A
  hgvsp: ENST00000317133.5:c.1911G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1665G>A
  hgvsp: ENST00000375737.5:c.1665G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1440G>A
  hgvsp: ENST00000375723.1:c.1440G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1974G>A
  hgvsp: ENST00000375741.2:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1440G>A
  hgvsp: ENST00000426073.2:c.1440G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1440G>A
  hgvsp: ENST00000218789.5:c.1440G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.497G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21534
  bin: 7.5e0
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23738
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: p.Ala658Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

13-111935682-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935682
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935682
    reference: chr 13
allele count: 1
allele frequency: 4.2268999915462e-5
allele num: 23658
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.1985G>A
  hgvsp: ENSP00000364893.2:p.Arg662Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1451G>A
  hgvsp: ENSP00000364888.4:p.Arg484Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1451G>A
  hgvsp: ENSP00000218789.5:p.Arg484Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1217G>A
  hgvsp: ENSP00000417596.1:p.Arg406Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1706G>A
  hgvsp: ENSP00000359657.3:p.Arg569Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1922G>A
  hgvsp: ENSP00000325994.5:p.Arg641Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1451G>A
  hgvsp: ENSP00000397068.2:p.Arg484Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1451G>A
  hgvsp: ENSP00000364875.1:p.Arg484Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1676G>A
  hgvsp: ENSP00000364889.5:p.Arg559Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1835G>A
  hgvsp: ENSP00000364891.2:p.Arg612Gln
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.508G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg662Gln
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-111935716-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935716
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935716
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 18404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1950+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1479+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1863+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1479+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1479+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.536+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1704+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1734+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1245+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1479+6G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2013+6G>C
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35950
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2013+6G>C
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

13-111935725-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935725
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935725
    reference: chr 13
allele count: 1
allele frequency: 5.641430666817105e-5
allele num: 17726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1479+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1704+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1950+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1479+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1734+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1479+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1863+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.536+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1479+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1245+15C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2013+15C>G
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5456
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS

13-111935727-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935727
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935727
    reference: chr 13
allele count: 1
allele frequency: 5.676013168350551e-5
allele num: 17618
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1479+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1479+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.536+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1950+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1704+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1479+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1734+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1245+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1863+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1479+17A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2013+17A>G
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35456
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

13-111935731-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935731
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935731
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 17370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1704+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.536+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1734+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1479+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1245+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2013+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1479+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1479+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1479+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1950+21A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1863+21A>G
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34995
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3545
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: A
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

13-111935746-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935746
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935746
    reference: chr 13
allele count: 1
allele frequency: 6.129704548240775e-5
allele num: 16314
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2013+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1245+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1479+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1479+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1734+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1479+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1950+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1479+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1704+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.536+36G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1863+36G>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4099
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ

13-111935746-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935746
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935746
    reference: chr 13
allele count: 1
allele frequency: 6.129704548240775e-5
allele num: 16314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1704+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1479+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1245+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1734+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.536+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1479+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1479+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1479+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1950+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1863+36G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2013+36G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

13-111935761-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111935761
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111935761
    reference: chr 13
allele count: 1
allele frequency: 6.891798759476223e-5
allele num: 14510
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1479+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1245+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1734+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.536+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1863+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1479+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1479+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1704+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2013+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1950+51G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1479+51G>C
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

13-111938454-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938454
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938454
    reference: chr 13
allele count: 38
allele frequency: 3.473936335545682e-4
allele num: 109386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-40G>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-40G>C
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6947
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12040
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17083
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7683
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-111938454-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938454
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938454
    reference: chr 13
allele count: 4
allele frequency: 3.656775090048086e-5
allele num: 109386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-40G>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-40G>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17083
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12040
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5352
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/13-111938461-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938461
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938461
    reference: chr 13
allele count: 1
allele frequency: 9.074574856167989e-6
allele num: 110198
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-33A>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-33A>C
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-111938461-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938461
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938461
    reference: chr 13
allele count: 2
allele frequency: 1.814914971233598e-5
allele num: 110198
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-33A>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-33A>G
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9267
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-111938462-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938462
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938462
    reference: chr 13
allele count: 4
allele frequency: 3.624633005908152e-5
allele num: 110356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-32G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-32G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23540
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

13-111938463-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938463
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938463
    reference: chr 13
allele count: 2
allele frequency: 1.809136137494347e-5
allele num: 110550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-31T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-31T>C
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25859
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

13-111938470-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938470
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938470
    reference: chr 13
allele count: 24
allele frequency: 2.13526931084183e-4
allele num: 112398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-24G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-24G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9685
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29142
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

13-111938471-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938471
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938471
    reference: chr 13
allele count: 2
allele frequency: 1.772703905266703e-5
allele num: 112822
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-23C>T
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-23C>T
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29751
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32743
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/13-111938477-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938477
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938477
    reference: chr 13
allele count: 1
allele frequency: 8.700342793506064e-6
allele num: 114938
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-17C>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-17C>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

13-111938483-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938483
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938483
    reference: chr 13
allele count: 5796
allele frequency: 4.940839499437379e-2
allele num: 117308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1735-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1705-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1480-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1246-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1864-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2014-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1480-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1951-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.537-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1480-11T>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1480-11T>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.75e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 31275
  bin: 2.25e1
  variant carriers: 496
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 3.75e1
  variant carriers: 770
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 3.25e1
  variant carriers: 859
genotype depth: GenotypeDepth
  all individuals: 10882
  bin: 2.75e1
  variant carriers: 743
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 4.25e1
  variant carriers: 580
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 5.25e1
  variant carriers: 236
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 9.25e1
  variant carriers: 34
num of homozygotes: 445
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

13-111938505-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938505
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938505
    reference: chr 13
allele count: 3
allele frequency: 2.48562480322137e-5
allele num: 120694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1257G>A
  hgvsp: ENST00000478679.1:c.1257G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1491G>A
  hgvsp: ENST00000218789.5:c.1491G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1716G>A
  hgvsp: ENST00000375737.5:c.1716G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1491G>A
  hgvsp: ENST00000375723.1:c.1491G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1491G>A
  hgvsp: ENST00000375736.4:c.1491G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1875G>A
  hgvsp: ENST00000375739.2:c.1875G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1746G>A
  hgvsp: ENST00000370623.3:c.1746G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2025G>A
  hgvsp: ENST00000375741.2:c.2025G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1962G>A
  hgvsp: ENST00000317133.5:c.1962G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1491G>A
  hgvsp: ENST00000426073.2:c.1491G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.548G>A
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys675Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

13-111938511-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938511
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938511
    reference: chr 13
allele count: 1530
allele frequency: 1.26532029970724e-2
allele num: 120918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1752T>C
  hgvsp: ENST00000370623.3:c.1752T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2031T>C
  hgvsp: ENST00000375741.2:c.2031T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1497T>C
  hgvsp: ENST00000375736.4:c.1497T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1968T>C
  hgvsp: ENST00000317133.5:c.1968T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1722T>C
  hgvsp: ENST00000375737.5:c.1722T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1497T>C
  hgvsp: ENST00000218789.5:c.1497T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1881T>C
  hgvsp: ENST00000375739.2:c.1881T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1497T>C
  hgvsp: ENST00000426073.2:c.1497T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.554T>C
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1497T>C
  hgvsp: ENST00000375723.1:c.1497T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1263T>C
  hgvsp: ENST00000478679.1:c.1263T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 4.25e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 4.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 4814
  bin: 3.25e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 3.75e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 13437
  bin: 2.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.25e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 33290
  bin: 2.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
hgvs: p.Pro677Pro
num of homozygotes: 22
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

13-111938517-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938517
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938517
    reference: chr 13
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1728C>G
  hgvsp: ENST00000375737.5:c.1728C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000417596
  ensembl transcript: ENST00000478679
  gene symbol: ARHGEF7
  hgvsc: ENST00000478679.1:c.1269C>G
  hgvsp: ENST00000478679.1:c.1269C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1503C>G
  hgvsp: ENST00000375736.4:c.1503C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000325994
  ensembl transcript: ENST00000317133
  gene symbol: ARHGEF7
  hgvsc: ENST00000317133.5:c.1974C>G
  hgvsp: ENST00000317133.5:c.1974C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000359657
  ensembl transcript: ENST00000370623
  gene symbol: ARHGEF7
  hgvsc: ENST00000370623.3:c.1758C>G
  hgvsp: ENST00000370623.3:c.1758C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000397068
  ensembl transcript: ENST00000426073
  gene symbol: ARHGEF7
  hgvsc: ENST00000426073.2:c.1503C>G
  hgvsp: ENST00000426073.2:c.1503C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364891
  ensembl transcript: ENST00000375739
  gene symbol: ARHGEF7
  hgvsc: ENST00000375739.2:c.1887C>G
  hgvsp: ENST00000375739.2:c.1887C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364875
  ensembl transcript: ENST00000375723
  gene symbol: ARHGEF7
  hgvsc: ENST00000375723.1:c.1503C>G
  hgvsp: ENST00000375723.1:c.1503C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000218789
  ensembl transcript: ENST00000218789
  gene symbol: ARHGEF7
  hgvsc: ENST00000218789.5:c.1503C>G
  hgvsp: ENST00000218789.5:c.1503C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.560C>G
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364893
  ensembl transcript: ENST00000375741
  gene symbol: ARHGEF7
  hgvsc: ENST00000375741.2:c.2037C>G
  hgvsp: ENST00000375741.2:c.2037C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr679Thr
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

13-111938540-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 111938540
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 111938540
    reference: chr 13
allele count: 2
allele frequency: 1.652619401751776e-5
allele num: 121020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102606
  ensembl transcript: ENST00000491688
  gene symbol: ARHGEF7
  hgvsc: ENST00000491688.1:n.583G>A
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364889
  ensembl transcript: ENST00000375737
  gene symbol: ARHGEF7
  hgvsc: ENST00000375737.5:c.1751G>A
  hgvsp: ENSP00000364889.5:p.Arg584His
  variant of: http://identifiers.org/hgnc/15607
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102606
  ensembl protein: ENSP00000364888
  ensembl transcript: ENST00000375736
  gene symbol: ARHGEF7
  hgvsc: ENST00000375736.4:c.1526G>A
  hgvsp: ENSP00000364888.4:p.Arg509His
  variant of: http://identifiers.org/hgnc/15607
canonical: true
consequence: missense
filter: PASS
hgvs: p.Arg687His
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 749
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28950
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18040
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26289
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7174
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 999
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2720
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.254705144291092e-4
allele num: 7970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.63e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.289e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 5.13685e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5590
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17622
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7246
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 93
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26942
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.65764447695684e-4
allele num: 2734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1532
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.865e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.935e0

FS
type: SiteQuality
SIO_000300: 2.392e0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

QD
type: SiteQuality
SIO_000300: 1.073e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.58e-2

DP
type: SiteQuality
SIO_000300: 5.18499e5

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14812
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 825
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29299
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1027
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 916
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.431708991077557e-4
allele num: 2914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.046e0

DP
type: SiteQuality
SIO_000300: 5.46743e5

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.06e-2

QD
type: SiteQuality
SIO_000300: 6.78e0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5978
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7630
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14496
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.376344086021505e-4
allele num: 1860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 922
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2918
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.08e-2

DP
type: SiteQuality
SIO_000300: 5.50017e5

VQSLOD
type: SiteQuality
SIO_000300: -9.185e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.561e1

GenotypeDepth
all individuals: 10995
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 818
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6943
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31269
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8727
bin: 6.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.97168e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

QD
type: SiteQuality
SIO_000300: 1.118e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.314e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeDepth
all individuals: 33481
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2853
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31763
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.143379830779785e-4
allele num: 8746
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 3686
num of homozygotes: 0

East Asian
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allele frequency: 3.469812630117973e-4
allele num: 2882
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 8876
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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FS
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 3750
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8912
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.986590038314176e-5
allele num: 16704
num of homozygotes: 0

Other
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MQRankSum
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SIO_000300: 6.01e-1

MQ
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ReadPosRankSum
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DP
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FS
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 18818
num of homozygotes: 0

African
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ReadPosRankSum
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DP
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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Latino
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Other
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African
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East Asian
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South Asian
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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African
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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QD
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DP
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 83
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 9.082652134423251e-4
allele num: 2202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9496
num of homozygotes: 0

African
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allele count: 39
allele frequency: 8.709245198749441e-3
allele num: 4478
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.723311546840959e-4
allele num: 3672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

MQRankSum
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SIO_000300: 3.37e-1

ClippingRankSum
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SIO_000300: -1.33e-1

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -1.59e-2

FS
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SIO_000300: 1.108e0

QD
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BaseQRankSum
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SIO_000300: -1.159e0

ReadPosRankSum
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SIO_000300: 3.77e-1

VQSLOD
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SIO_000300: 3.91e0

DP
type: SiteQuality
SIO_000300: 6.90023e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.120758847136082e-5
allele num: 21928
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3702
num of homozygotes: 0

African
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allele count: 1
allele frequency: 2.185314685314685e-4
allele num: 4576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

QD
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: 3.8e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
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DP
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SIO_000300: 6.95464e5

BaseQRankSum
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SIO_000300: -4.39e-1

InbreedingCoeff
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SIO_000300: -1.64e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22736
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.13857998289136e-4
allele num: 4676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2452
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.724e1

QD
type: SiteQuality
SIO_000300: 6.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.58e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

FS
type: SiteQuality
SIO_000300: 1.744e0

VQSLOD
type: SiteQuality
SIO_000300: -1.637e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.102e0

DP
type: SiteQuality
SIO_000300: 7.00437e5

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 61

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 302
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variant carriers: 218

GenotypeQuality
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bin: 8.25e1
variant carriers: 9

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.27420998980632e-4
allele num: 23544
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.890173410404624e-3
allele num: 346
num of homozygotes: 0

African
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allele count: 234
allele frequency: 4.761904761904762e-2
allele num: 4914
num of homozygotes: 5

South Asian
type: Population
allele count: 1
allele frequency: 1.026904908605463e-4
allele num: 9738
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 4.122938530734633e-3
allele num: 2668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.356e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

FS
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SIO_000300: 4.214e0

DP
type: SiteQuality
SIO_000300: 7.07714e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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QD
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SIO_000300: 6.73e0

BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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SIO_000300: 5.917e1

ClippingRankSum
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 4.21e-1

DP
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SIO_000300: 7.00278e5

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

East Asian
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allele count: 4
allele frequency: 1.049868766404199e-3
allele num: 3810
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 23582
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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South Asian
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DP
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FS
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MQ
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.025220422390814e-4
allele num: 9754
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 23560
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2670
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4758
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 9.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

DP
type: SiteQuality
SIO_000300: 7.01351e5

FS
type: SiteQuality
SIO_000300: 1.174e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 1.471206389239176e-3
allele num: 4758
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 1.49812734082397e-3
allele num: 2670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.01351e5

VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

FS
type: SiteQuality
SIO_000300: 1.174e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

QD
type: SiteQuality
SIO_000300: 9.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.273560876209883e-4
allele num: 23556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.295336787564767e-3
allele num: 772
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

FS
type: SiteQuality
SIO_000300: 4.176e0

QD
type: SiteQuality
SIO_000300: 1.106e1

DP
type: SiteQuality
SIO_000300: 7.04077e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

GenotypeDepth
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1855
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GenotypeQuality
all individuals: 193
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.490405841399219e-5
allele num: 23556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.04077e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 4.176e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

QD
type: SiteQuality
SIO_000300: 1.106e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

GenotypeDepth
all individuals: 790
bin: 3.25e1
variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 332
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.610966057441253e-4
allele num: 3830
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.84e0

MQ
type: SiteQuality
SIO_000300: 5.882e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

FS
type: SiteQuality
SIO_000300: 6.056e0

VQSLOD
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SIO_000300: -1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.28e-1

DP
type: SiteQuality
SIO_000300: 7.06592e5

GenotypeDepth
all individuals: 785
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variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 3
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GenotypeDepth
all individuals: 3
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variant carriers: 2

GenotypeDepth
all individuals: 9719
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Finnish)
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allele count: 2
allele frequency: 2.439024390243902e-3
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 1.657000828500414e-3
allele num: 4828
num of homozygotes: 0

European (Non-Finnish)
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allele count: 28
allele frequency: 1.157311730181037e-3
allele num: 24194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2754
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.923976608187134e-3
allele num: 342
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South Asian
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allele count: 1
allele frequency: 1.018537380321858e-4
allele num: 9818
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DP
type: SiteQuality
SIO_000300: 7.08958e5

ClippingRankSum
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MQRankSum
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QD
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -1.61e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 5.659999999999999e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 38
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.016709511568123e-5
allele num: 24896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 1
allele frequency: 3.401360544217687e-4
allele num: 2940
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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MQRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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European (Finnish)
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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FS
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MQRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

East Asian
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South Asian
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Other
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Latino
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European (Non-Finnish)
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African
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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MQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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Latino
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African
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European (Finnish)
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East Asian
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South Asian
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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South Asian
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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InbreedingCoeff
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ClippingRankSum
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FS
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 2.216312056737589e-4
allele num: 4512
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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BaseQRankSum
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MQRankSum
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DP
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ClippingRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22854
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele num: 3298
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

ReadPosRankSum
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FS
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 5.829e1

ClippingRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 4.469473496022169e-5
allele num: 22374
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.75e1

InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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QD
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SIO_000300: 5.91e0

DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 22376
num of homozygotes: 0

South Asian
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Other
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African
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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ReadPosRankSum
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FS
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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African
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South Asian
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ClippingRankSum
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DP
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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allele num: 2558
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

DP
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ClippingRankSum
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SIO_000300: 5.659999999999999e-1

MQ
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VQSLOD
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InbreedingCoeff
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QD
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BaseQRankSum
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SIO_000300: -1.083e0

ReadPosRankSum
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SIO_000300: -3.58e-1

FS
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SIO_000300: 1.0143e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 4024
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

South Asian
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MQRankSum
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SIO_000300: 1.38e0

FS
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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SIO_000300: -7.2e-1

ReadPosRankSum
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DP
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SIO_000300: 6.24445e5

MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.107665042091272e-4
allele num: 9028
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
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SIO_000300: 5.917e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.61e-2

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -5.79e-1

VQSLOD
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SIO_000300: -1.719e0

QD
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SIO_000300: 5.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

DP
type: SiteQuality
SIO_000300: 6.06405e5

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 8780
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele num: 256
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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SIO_000300: 1.75e0

ClippingRankSum
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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SIO_000300: 5.49e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 15210
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

African
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allele frequency: 0.0e0
allele num: 3198
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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East Asian
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Other
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European (Finnish)
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MQ
type: SiteQuality
SIO_000300: 5.946e1

DP
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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African
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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QD
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DP
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 14
allele frequency: 4.507405022537025e-3
allele num: 3106
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.19672131147541e-4
allele num: 1220
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 7.845598619174644e-5
allele num: 12746
num of homozygotes: 0

European (Finnish)
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East Asian
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South Asian
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Other
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Latino
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African
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allele frequency: 1.441677588466579e-2
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South Asian
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European (Finnish)
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Other
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VQSLOD
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MQ
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DP
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QD
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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FS
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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DP
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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African
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Other
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South Asian
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East Asian
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European (Finnish)
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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DP
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QD
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InbreedingCoeff
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Latino
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South Asian
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European (Non-Finnish)
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allele num: 7296
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European (Finnish)
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East Asian
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Other
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ClippingRankSum
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FS
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DP
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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African
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QD
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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South Asian
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Latino
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European (Finnish)
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Other
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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DP
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.579778830963665e-4
allele num: 6330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2214
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6792
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
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SIO_000300: -1.809e0

FS
type: SiteQuality
SIO_000300: 2.197e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 2.46568e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.33e-2

QD
type: SiteQuality
SIO_000300: 8.93e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.635055591890124e-4
allele num: 6116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2078
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -9.26e-2

BaseQRankSum
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SIO_000300: -3.318e0

MQ
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SIO_000300: 5.928e1

VQSLOD
type: SiteQuality
SIO_000300: -1.558e0

ReadPosRankSum
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SIO_000300: -2.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

QD
type: SiteQuality
SIO_000300: 1.206e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 38

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15046
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.001200720432259e-4
allele num: 9994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 35
allele frequency: 5.789525920534621e-4
allele num: 60454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.625487646293888e-4
allele num: 6152
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.352732e6

VQSLOD
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
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QD
type: SiteQuality
SIO_000300: 1.452e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 4
allele frequency: 5.379236148466917e-4
allele num: 7436
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.452e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ClippingRankSum
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SIO_000300: -2.48e-1

MQ
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

DP
type: SiteQuality
SIO_000300: 1.352732e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7478
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.641820450515532e-5
allele num: 60908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.408408e6

VQSLOD
type: SiteQuality
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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FS
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -1.39e-1

ClippingRankSum
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SIO_000300: 4.14e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60908
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.324152542372881e-4
allele num: 15104
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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MQ
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FS
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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SIO_000300: 1.8e-3

ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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allele count: 4
allele frequency: 2.646903123345686e-4
allele num: 15112
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61000
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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DP
type: SiteQuality
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MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6200
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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Other
type: Population
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East Asian
type: Population
allele count: 2
allele frequency: 2.656042496679947e-4
allele num: 7530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61112
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.426428e6

QD
type: SiteQuality
SIO_000300: 1.676e1

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4496
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6067
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 443
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31998
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.184834123222749e-3
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.780114722753346e-4
allele num: 6276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.429313929313929e-3
allele num: 7696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.449695563931574e-4
allele num: 62082
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.384e1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

FS
type: SiteQuality
SIO_000300: 2.883e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.747e0

DP
type: SiteQuality
SIO_000300: 1.486197e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-2

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
all individuals: 1969
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
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GenotypeQuality
all individuals: 4203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6055
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1587
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4555
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.210169817983371e-5
allele num: 62302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10550
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.721e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

DP
type: SiteQuality
SIO_000300: 1.496066e6

FS
type: SiteQuality
SIO_000300: 5.701e0

QD
type: SiteQuality
SIO_000300: 1.281e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

GenotypeQuality
all individuals: 834
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6057
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1615
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4726
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.264862130027827e-4
allele num: 7906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10854
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.117e1

DP
type: SiteQuality
SIO_000300: 1.53399e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.487e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.72e-1

FS
type: SiteQuality
SIO_000300: 3.737e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.127e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 614
bin: 3.25e1
variant carriers: 8

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 35037
bin: 6.25e1
variant carriers: 20

GenotypeQuality
all individuals: 2022
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 711
bin: 8.75e1
variant carriers: 17

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1799
bin: 7.75e1
variant carriers: 29

GenotypeQuality
all individuals: 10638
bin: 9.75e1
variant carriers: 5089

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 241
bin: 5.25e1
variant carriers: 19

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 15

GenotypeQuality
all individuals: 468
bin: 2.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1374
bin: 8.25e1
variant carriers: 34

GenotypeQuality
all individuals: 301
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4364
bin: 6.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1484
bin: 7.25e1
variant carriers: 29

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 11

East Asian
type: Population
allele count: 866
allele frequency: 1.058420923979467e-1
allele num: 8182
num of homozygotes: 49

Other
type: Population
allele count: 28
allele frequency: 3.19634703196347e-2
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 363
allele frequency: 2.288199697428139e-2
allele num: 15864
num of homozygotes: 6

Latino
type: Population
allele count: 2679
allele frequency: 2.394957983193277e-1
allele num: 11186
num of homozygotes: 364

African
type: Population
allele count: 183
allele frequency: 1.819085487077535e-2
allele num: 10060
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 264
allele frequency: 4.065291037881121e-2
allele num: 6494
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 1413
allele frequency: 2.185750085078737e-2
allele num: 64646
num of homozygotes: 16

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

QD
type: SiteQuality
SIO_000300: 1.49e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.74e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.657151e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 163
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5365
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41501
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6017
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.518888955835392e-5
allele num: 66388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.651e0

FS
type: SiteQuality
SIO_000300: 5.616e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

DP
type: SiteQuality
SIO_000300: 1.631583e6

QD
type: SiteQuality
SIO_000300: 8.23e0

GenotypeDepth
all individuals: 266
bin: 6.75e1
variant carriers: 83

GenotypeQuality
all individuals: 1629
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 958
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 1

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5189
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40943
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7290
bin: 9.75e1
variant carriers: 1499

GenotypeQuality
all individuals: 1422
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 737
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 54
allele frequency: 5.211349160393747e-3
allele num: 10362
num of homozygotes: 1

South Asian
type: Population
allele count: 238
allele frequency: 1.450511945392492e-2
allele num: 16408
num of homozygotes: 6

Other
type: Population
allele count: 11
allele frequency: 1.216814159292035e-2
allele num: 904
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 36
allele frequency: 5.454545454545455e-3
allele num: 6600
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 1090
allele frequency: 1.638949869184735e-2
allele num: 66506
num of homozygotes: 12

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 101
allele frequency: 8.75823794658342e-3
allele num: 11532
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.95e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.458e1

DP
type: SiteQuality
SIO_000300: 1.692311e6

GenotypeDepth
all individuals: 462
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 987
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 5408
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2023
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41836
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5999
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1459
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.164e1

DP
type: SiteQuality
SIO_000300: 1.64315e6

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.574e0

VQSLOD
type: SiteQuality
SIO_000300: 4.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.93e-1