15-52702485-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702485
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702485
    reference: chr 15
allele count: 4
allele frequency: 3.313342831582784e-5
allele num: 120724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.756+45A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.756+45A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.756+45A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*440+45A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.756+45A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.756+45A>G
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3707
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6552
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-52702496-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702496
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702496
    reference: chr 15
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.756+34T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.756+34T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.756+34T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.756+34T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.756+34T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*440+34T>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

15-52702502-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702502
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702502
    reference: chr 15
allele count: 1
allele frequency: 8.283357078956959e-6
allele num: 120724
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.756+28T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.756+28T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.756+28T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.756+28T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.756+28T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*440+28T>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
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genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3514
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

15-52702508-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702508
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702508
    reference: chr 15
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.756+22A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.756+22A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.756+22A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.756+22A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.756+22A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*440+22A>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6661
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3316
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

15-52702515-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702515
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702515
    reference: chr 15
allele count: 3
allele frequency: 2.484842460987973e-5
allele num: 120732
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.756+15T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.756+15T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.756+15T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*440+15T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.756+15T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.756+15T>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3313
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6690
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35708
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-52702516-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702516
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702516
    reference: chr 15
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.756+14A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.756+14A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*440+14A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.756+14A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.756+14A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.756+14A>G
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3313
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 5
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genotype quality: GenotypeQuality
  all individuals: 4
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genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

15-52702520-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702520
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702520
    reference: chr 15
allele count: 16
allele frequency: 1.325293221125174e-4
allele num: 120728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*440+10C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.756+10C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.756+10C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.756+10C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.756+10C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.756+10C>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
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genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2036
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genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 5
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 5
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genotype quality: GenotypeQuality
  all individuals: 3
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genotype quality: GenotypeQuality
  all individuals: 1965
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genotype quality: GenotypeQuality
  all individuals: 14
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
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genotype quality: GenotypeQuality
  all individuals: 3518
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35706
  bin: 9.75e1
  variant carriers: 16
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

15-52702524-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702524
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702524
    reference: chr 15
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*440+6C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.756+6C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.756+6C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.756+6C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.756+6C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.756+6C>T
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6990
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35698
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: c.756+6C>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

15-52702546-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702546
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702546
    reference: chr 15
allele count: 2
allele frequency: 1.656534199148542e-5
allele num: 120734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.740C>G
  hgvsp: ENSP00000350945.6:p.Ser247Cys
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.740C>G
  hgvsp: ENSP00000382179.2:p.Ser247Cys
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*424C>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.740C>G
  hgvsp: ENSP00000382177.3:p.Ser247Cys
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.740C>G
  hgvsp: ENSP00000348693.6:p.Ser247Cys
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.740C>G
  hgvsp: ENSP00000451109.1:p.Ser247Cys
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser247Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD

15-52702559-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702559
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702559
    reference: chr 15
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.727C>A
  hgvsp: ENSP00000451109.1:p.Leu243Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.727C>A
  hgvsp: ENSP00000382177.3:p.Leu243Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.727C>A
  hgvsp: ENSP00000350945.6:p.Leu243Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*411C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.727C>A
  hgvsp: ENSP00000348693.6:p.Leu243Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.727C>A
  hgvsp: ENSP00000382179.2:p.Leu243Ile
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3517
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu243Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

15-52702569-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702569
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702569
    reference: chr 15
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*401G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.717G>A
  hgvsp: ENSP00000382179.2:p.Met239Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.717G>A
  hgvsp: ENSP00000348693.6:p.Met239Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.717G>A
  hgvsp: ENSP00000451109.1:p.Met239Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.717G>A
  hgvsp: ENSP00000382177.3:p.Met239Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.717G>A
  hgvsp: ENSP00000350945.6:p.Met239Ile
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6721
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35697
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3710
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met239Ile
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

15-52702583-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702583
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702583
    reference: chr 15
allele count: 2
allele frequency: 1.656616526406467e-5
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.703A>C
  hgvsp: ENSP00000348693.6:p.Ile235Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.703A>C
  hgvsp: ENSP00000451109.1:p.Ile235Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*387A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.703A>C
  hgvsp: ENSP00000350945.6:p.Ile235Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.703A>C
  hgvsp: ENSP00000382177.3:p.Ile235Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.703A>C
  hgvsp: ENSP00000382179.2:p.Ile235Leu
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35697
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile235Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

15-52702588-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702588
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702588
    reference: chr 15
allele count: 9
allele frequency: 7.455021371061264e-5
allele num: 120724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.698G>A
  hgvsp: ENSP00000451109.1:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.698G>A
  hgvsp: ENSP00000350945.6:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*382G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.698G>A
  hgvsp: ENSP00000382179.2:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.698G>A
  hgvsp: ENSP00000348693.6:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.698G>A
  hgvsp: ENSP00000382177.3:p.Arg233Gln
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6712
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3316
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg233Gln
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

15-52702590-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702590
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702590
    reference: chr 15
allele count: 35
allele frequency: 2.899223008233794e-4
allele num: 120722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*380T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.696T>C
  hgvsp: ENST00000399231.3:c.696T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.696T>C
  hgvsp: ENST00000553916.1:c.696T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.696T>C
  hgvsp: ENST00000356338.6:c.696T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.696T>C
  hgvsp: ENST00000399233.2:c.696T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.696T>C
  hgvsp: ENST00000358212.6:c.696T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 9.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3517
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr232Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

15-52702616-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702616
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702616
    reference: chr 15
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.670A>C
  hgvsp: ENSP00000350945.6:p.Ile224Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.670A>C
  hgvsp: ENSP00000382179.2:p.Ile224Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.670A>C
  hgvsp: ENSP00000382177.3:p.Ile224Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.670A>C
  hgvsp: ENSP00000348693.6:p.Ile224Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.670A>C
  hgvsp: ENSP00000451109.1:p.Ile224Leu
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*354A>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35677
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3519
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile224Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-52702635-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702635
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702635
    reference: chr 15
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.651C>T
  hgvsp: ENST00000399233.2:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.651C>T
  hgvsp: ENST00000356338.6:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*335C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.651C>T
  hgvsp: ENST00000553916.1:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.651C>T
  hgvsp: ENST00000358212.6:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.651C>T
  hgvsp: ENST00000399231.3:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35676
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser217Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

15-52702652-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702652
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702652
    reference: chr 15
allele count: 1
allele frequency: 8.287063893262618e-6
allele num: 120670
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.634A>T
  hgvsp: ENSP00000451109.1:p.Thr212Ser
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.634A>T
  hgvsp: ENSP00000350945.6:p.Thr212Ser
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.634A>T
  hgvsp: ENSP00000382179.2:p.Thr212Ser
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*318A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.634A>T
  hgvsp: ENSP00000348693.6:p.Thr212Ser
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.634A>T
  hgvsp: ENSP00000382177.3:p.Thr212Ser
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35676
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3314
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr212Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS

15-52702671-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702671
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702671
    reference: chr 15
allele count: 1
allele frequency: 8.292148993333113e-6
allele num: 120596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.615C>A
  hgvsp: ENST00000358212.6:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.615C>A
  hgvsp: ENST00000356338.6:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*299C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.615C>A
  hgvsp: ENST00000553916.1:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.615C>A
  hgvsp: ENST00000399231.3:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.615C>A
  hgvsp: ENST00000399233.2:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3672
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: c.615C>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-52702679-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702679
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702679
    reference: chr 15
allele count: 1
allele frequency: 8.297102651754007e-6
allele num: 120524
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-6T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-6T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-6T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-6T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-6T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-6T>G
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6428
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3652
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.25e1
  variant carriers: 0
hgvs: c.613-6T>G
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

15-52702681-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702681
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702681
    reference: chr 15
allele count: 1
allele frequency: 8.297791128001726e-6
allele num: 120514
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-8C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-8C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-8C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-8C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-8C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-8C>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35670
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3639
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6360
  bin: 6.25e1
  variant carriers: 0
hgvs: c.613-8C>A
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

15-52702684-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702684
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702683
    reference: chr 15
allele count: 2
allele frequency: 1.659695943703114e-5
allele num: 120504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-12delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-12delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-12delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-12delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-12delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-12delC
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6992
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1905
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: AG
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

15-52702694-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702694
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702694
    reference: chr 15
allele count: 1
allele frequency: 8.30592378484335e-6
allele num: 120396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-21A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-21A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-21A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-21A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-21A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-21A>G
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3262
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3528
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

15-52702699-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702699
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702699
    reference: chr 15
allele count: 18327
allele frequency: 1.523644042432909e-1
allele num: 120284
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-26A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-26A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-26A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-26A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-26A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-26A>G
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 3.75e1
  variant carriers: 1123
genotype depth: GenotypeDepth
  all individuals: 6960
  bin: 4.25e1
  variant carriers: 1413
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 8.25e1
  variant carriers: 565
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 6.25e1
  variant carriers: 1509
genotype depth: GenotypeDepth
  all individuals: 5917
  bin: 2.75e1
  variant carriers: 431
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6232
  bin: 4.75e1
  variant carriers: 1627
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 8.75e1
  variant carriers: 374
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 2.25e1
  variant carriers: 174
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7322
  bin: 3.25e1
  variant carriers: 749
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 6.75e1
  variant carriers: 1268
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 352
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 7.25e1
  variant carriers: 966
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.75e1
  variant carriers: 741
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.25e1
  variant carriers: 1783
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 5.75e1
  variant carriers: 1808
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 9.75e1
  variant carriers: 1822
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 7.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2739
  bin: 7.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 6.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 1491
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

15-52702709-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702709
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702709
    reference: chr 15
allele count: 1
allele frequency: 8.315455104857889e-6
allele num: 120258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-36C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-36C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-36C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-36C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-36C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-36C>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4109
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6905
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3899
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3806
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/15-52702715-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702715
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702714
    reference: chr 15
allele count: 1
allele frequency: 8.327920185212944e-6
allele num: 120078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-43delT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-43delT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-43delT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-43delT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-43delT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-43delT
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7667
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3670
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5128
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3797
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: CA
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

15-52702718-AACATG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702718
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702713
    reference: chr 15
allele count: 1
allele frequency: 8.325701440346349e-6
allele num: 120110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-50_613-46delCATGT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-50_613-46delCATGT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-50_613-46delCATGT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-50_613-46delCATGT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-50_613-46delCATGT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-50_*297-46delCATGT
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3799
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3733
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: AACATG
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

15-52702720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702720
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702720
    reference: chr 15
allele count: 1
allele frequency: 8.329585020074299e-6
allele num: 120054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-47G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-47G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-47G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-47G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-47G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-47G>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7662
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31229
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3874
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

15-52702721-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52702721
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52702721
    reference: chr 15
allele count: 27
allele frequency: 2.248800639658849e-4
allele num: 120064
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.613-48T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.613-48T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*297-48T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.613-48T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.613-48T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.613-48T>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4722
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31240
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3797
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

15-52708291-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708291
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708291
    reference: chr 15
allele count: 1
allele frequency: 8.31282835672009e-6
allele num: 120296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+51A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+51A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+51A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+51A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.346A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+51A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+51A>G
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

15-52708292-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708292
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708292
    reference: chr 15
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+50C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+50C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.345C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+50C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+50C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+50C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+50C>T
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8050
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

15-52708311-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708311
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708311
    reference: chr 15
allele count: 2
allele frequency: 1.661267547138467e-5
allele num: 120390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.326A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+31A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+31A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+31A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+31A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+31A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+31A>G
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13953
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8028
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

15-52708312-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708312
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708311
    reference: chr 15
allele count: 10
allele frequency: 8.305647840531562e-5
allele num: 120400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+29delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+29delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.324delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+29delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+29delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+29delC
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+29delC
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10250
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22089
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: AG
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS

15-52708319-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708319
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708319
    reference: chr 15
allele count: 1
allele frequency: 8.302337938363443e-6
allele num: 120448
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+23T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+23T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+23T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+23T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+23T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.318T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+23T>C
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14029
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8037
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

15-52708321-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708321
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708321
    reference: chr 15
allele count: 1
allele frequency: 8.301235223801302e-6
allele num: 120464
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+21C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+21C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+21C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+21C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+21C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.316C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+21C>T
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-52708323-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708323
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708323
    reference: chr 15
allele count: 6
allele frequency: 4.979831681689159e-5
allele num: 120486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.314G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+19G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+19G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+19G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+19G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+19G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+19G>A
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22357
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37503
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

15-52708323-CGAAGACTCGCTGTCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708323
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708308
    reference: chr 15
allele count: 1
allele frequency: 8.299719469481931e-6
allele num: 120486
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10271
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
hgvs: c.612+4_612+18delAGACAGCGAGTCTTC
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: CGAAGACTCGCTGTCT
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD

15-52708324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708324
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708324
    reference: chr 15
allele count: 3
allele frequency: 2.48970920196521e-5
allele num: 120496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+18C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+18C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+18C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.313C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+18C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+18C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+18C>T
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-52708324-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708324
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708324
    reference: chr 15
allele count: 11
allele frequency: 9.128933740539105e-5
allele num: 120496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+18C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.313C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+18C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+18C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+18C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+18C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+18C>A
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22383
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14107
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10269
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

15-52708328-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708328
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708328
    reference: chr 15
allele count: 3
allele frequency: 2.489213408562894e-5
allele num: 120520
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+14T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+14T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+14T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+14T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.309T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+14T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+14T>C
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10288
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8053
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-52708333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708333
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708333
    reference: chr 15
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.612+9G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.612+9G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.304G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.612+9G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.612+9G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.612+9G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*296+9G>A
  variant of: http://identifiers.org/hgnc/7602
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7196
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

15-52708348-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708348
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708348
    reference: chr 15
allele count: 1
allele frequency: 8.293524416135881e-6
allele num: 120576
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.606C>T
  hgvsp: ENST00000399231.3:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.606C>T
  hgvsp: ENST00000356338.6:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.606C>T
  hgvsp: ENST00000358212.6:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.606C>T
  hgvsp: ENST00000553916.1:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.606C>T
  hgvsp: ENST00000399233.2:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.289C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*290C>T
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8075
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile202Ile
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

15-52708350-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708350
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708350
    reference: chr 15
allele count: 4
allele frequency: 3.317354741329264e-5
allele num: 120578
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.604A>G
  hgvsp: ENSP00000382177.3:p.Ile202Val
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*288A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.604A>G
  hgvsp: ENSP00000350945.6:p.Ile202Val
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.604A>G
  hgvsp: ENSP00000348693.6:p.Ile202Val
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.604A>G
  hgvsp: ENSP00000382179.2:p.Ile202Val
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.287A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.604A>G
  hgvsp: ENSP00000451109.1:p.Ile202Val
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7195
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 37944
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile202Val
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

15-52708360-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708360
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708360
    reference: chr 15
allele count: 1
allele frequency: 8.291048983517394e-6
allele num: 120612
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.594C>T
  hgvsp: ENST00000399231.3:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*278C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.277C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.594C>T
  hgvsp: ENST00000356338.6:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.594C>T
  hgvsp: ENST00000553916.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.594C>T
  hgvsp: ENST00000358212.6:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.594C>T
  hgvsp: ENST00000399233.2:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7191
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8076
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala198Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-52708362-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708362
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708362
    reference: chr 15
allele count: 1
allele frequency: 8.290911502810618e-6
allele num: 120614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.592G>T
  hgvsp: ENSP00000350945.6:p.Ala198Ser
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.592G>T
  hgvsp: ENSP00000348693.6:p.Ala198Ser
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*276G>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.275G>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.592G>T
  hgvsp: ENSP00000382177.3:p.Ala198Ser
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.592G>T
  hgvsp: ENSP00000382179.2:p.Ala198Ser
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.592G>T
  hgvsp: ENSP00000451109.1:p.Ala198Ser
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2042
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38005
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8076
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala198Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

15-52708365-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708365
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708365
    reference: chr 15
allele count: 2
allele frequency: 1.658072325114821e-5
allele num: 120622
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.589T>C
  hgvsp: ENST00000399231.3:c.589T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.589T>C
  hgvsp: ENST00000399233.2:c.589T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.589T>C
  hgvsp: ENST00000356338.6:c.589T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*273T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.589T>C
  hgvsp: ENST00000553916.1:c.589T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.589T>C
  hgvsp: ENST00000358212.6:c.589T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.272T>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu197Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

15-52708370-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708370
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708370
    reference: chr 15
allele count: 1
allele frequency: 8.290361625574107e-6
allele num: 120622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.267A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.584A>G
  hgvsp: ENSP00000382179.2:p.Lys195Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.584A>G
  hgvsp: ENSP00000348693.6:p.Lys195Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.584A>G
  hgvsp: ENSP00000382177.3:p.Lys195Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.584A>G
  hgvsp: ENSP00000350945.6:p.Lys195Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*268A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.584A>G
  hgvsp: ENSP00000451109.1:p.Lys195Arg
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7191
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys195Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-52708387-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708387
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708387
    reference: chr 15
allele count: 1
allele frequency: 8.287063893262618e-6
allele num: 120670
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*251G>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.567G>T
  hgvsp: ENSP00000348693.6:p.Glu189Asp
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.250G>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.567G>T
  hgvsp: ENSP00000382179.2:p.Glu189Asp
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.567G>T
  hgvsp: ENSP00000350945.6:p.Glu189Asp
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.567G>T
  hgvsp: ENSP00000451109.1:p.Glu189Asp
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.567G>T
  hgvsp: ENSP00000382177.3:p.Glu189Asp
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu189Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

15-52708390-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708390
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708390
    reference: chr 15
allele count: 1
allele frequency: 8.286926544683108e-6
allele num: 120672
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.564T>C
  hgvsp: ENST00000356338.6:c.564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.564T>C
  hgvsp: ENST00000358212.6:c.564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.564T>C
  hgvsp: ENST00000553916.1:c.564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.564T>C
  hgvsp: ENST00000399233.2:c.564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.564T>C
  hgvsp: ENST00000399231.3:c.564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.247T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*248T>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38098
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8064
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser188Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

15-52708413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708413
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708413
    reference: chr 15
allele count: 1
allele frequency: 8.287338604080686e-6
allele num: 120666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.541G>A
  hgvsp: ENSP00000451109.1:p.Ala181Thr
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.541G>A
  hgvsp: ENSP00000348693.6:p.Ala181Thr
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*225G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.541G>A
  hgvsp: ENSP00000350945.6:p.Ala181Thr
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.541G>A
  hgvsp: ENSP00000382179.2:p.Ala181Thr
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.541G>A
  hgvsp: ENSP00000382177.3:p.Ala181Thr
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.224G>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala181Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

15-52708420-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708420
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708420
    reference: chr 15
allele count: 2
allele frequency: 1.657440249279014e-5
allele num: 120668
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.534A>G
  hgvsp: ENST00000399231.3:c.534A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.217A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.534A>G
  hgvsp: ENST00000553916.1:c.534A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.534A>G
  hgvsp: ENST00000399233.2:c.534A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.534A>G
  hgvsp: ENST00000356338.6:c.534A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*218A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.534A>G
  hgvsp: ENST00000358212.6:c.534A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7191
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg178Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD

15-52708420-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708420
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708420
    reference: chr 15
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.534A>C
  hgvsp: ENST00000399233.2:c.534A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.534A>C
  hgvsp: ENST00000358212.6:c.534A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*218A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.534A>C
  hgvsp: ENST00000356338.6:c.534A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.534A>C
  hgvsp: ENST00000399231.3:c.534A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.534A>C
  hgvsp: ENST00000553916.1:c.534A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.217A>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8071
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg178Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

15-52708422-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708422
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708422
    reference: chr 15
allele count: 1
allele frequency: 8.287338604080686e-6
allele num: 120666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.215C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.532C>T
  hgvsp: ENSP00000382179.2:p.Arg178Ter
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.532C>T
  hgvsp: ENSP00000348693.6:p.Arg178Ter
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.532C>T
  hgvsp: ENSP00000382177.3:p.Arg178Ter
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.532C>T
  hgvsp: ENSP00000350945.6:p.Arg178Ter
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.532C>T
  hgvsp: ENSP00000451109.1:p.Arg178Ter
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*216C>T
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14279
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg178Ter
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP

15-52708441-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708441
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708441
    reference: chr 15
allele count: 2
allele frequency: 1.657440249279014e-5
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.513C>A
  hgvsp: ENST00000399233.2:c.513C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.196C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.513C>A
  hgvsp: ENST00000553916.1:c.513C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.513C>A
  hgvsp: ENST00000358212.6:c.513C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.513C>A
  hgvsp: ENST00000356338.6:c.513C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.513C>A
  hgvsp: ENST00000399231.3:c.513C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*197C>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val171Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

15-52708450-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708450
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708450
    reference: chr 15
allele count: 1
allele frequency: 8.287475966319697e-6
allele num: 120664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.187A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.504A>T
  hgvsp: ENST00000358212.6:c.504A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.504A>T
  hgvsp: ENST00000356338.6:c.504A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.504A>T
  hgvsp: ENST00000399231.3:c.504A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.504A>T
  hgvsp: ENST00000553916.1:c.504A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.504A>T
  hgvsp: ENST00000399233.2:c.504A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*188A>T
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38117
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1821
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly168Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

15-52708465-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708465
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708465
    reference: chr 15
allele count: 22
allele frequency: 1.823758600679764e-4
allele num: 120630
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.489A>C
  hgvsp: ENST00000399233.2:c.489A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.489A>C
  hgvsp: ENST00000399231.3:c.489A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.489A>C
  hgvsp: ENST00000358212.6:c.489A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.172A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.489A>C
  hgvsp: ENST00000553916.1:c.489A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.489A>C
  hgvsp: ENST00000356338.6:c.489A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*173A>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 22760
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2021
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly163Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

15-52708467-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708467
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708467
    reference: chr 15
allele count: 1
allele frequency: 8.290086714307032e-6
allele num: 120626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.487G>A
  hgvsp: ENSP00000451109.1:p.Gly163Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.487G>A
  hgvsp: ENSP00000382179.2:p.Gly163Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.487G>A
  hgvsp: ENSP00000348693.6:p.Gly163Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.487G>A
  hgvsp: ENSP00000382177.3:p.Gly163Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.170G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.487G>A
  hgvsp: ENSP00000350945.6:p.Gly163Arg
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*171G>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7178
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly163Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

15-52708473-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708473
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708473
    reference: chr 15
allele count: 1
allele frequency: 8.292011476143882e-6
allele num: 120598
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.481G>A
  hgvsp: ENSP00000451109.1:p.Val161Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.481G>A
  hgvsp: ENSP00000348693.6:p.Val161Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.164G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.481G>A
  hgvsp: ENSP00000350945.6:p.Val161Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*165G>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.481G>A
  hgvsp: ENSP00000382177.3:p.Val161Ile
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.481G>A
  hgvsp: ENSP00000382179.2:p.Val161Ile
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val161Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-52708474-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708474
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708474
    reference: chr 15
allele count: 3
allele frequency: 2.487809732311673e-5
allele num: 120588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.480C>T
  hgvsp: ENST00000553916.1:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.480C>T
  hgvsp: ENST00000399231.3:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.480C>T
  hgvsp: ENST00000358212.6:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*164C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.163C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.480C>T
  hgvsp: ENST00000356338.6:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.480C>T
  hgvsp: ENST00000399233.2:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38065
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile160Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-52708477-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708477
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708477
    reference: chr 15
allele count: 223
allele frequency: 1.84939459280146e-3
allele num: 120580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*161C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.477C>T
  hgvsp: ENST00000356338.6:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.477C>T
  hgvsp: ENST00000358212.6:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.160C>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.477C>T
  hgvsp: ENST00000399233.2:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.477C>T
  hgvsp: ENST00000553916.1:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.477C>T
  hgvsp: ENST00000399231.3:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9897
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22717
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14248
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile159Ile
num of homozygotes: 3
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

15-52708479-T-TATACAATGTAGTTTTAAGAGTGATACAAATGTAAGTAATGAAAACAATAGTAACACAGCCATACAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708479
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708545
    reference: chr 15
allele count: 1
allele frequency: 8.29476268683953e-6
allele num: 120558
alternate allele: TATACAATGTAGTTTTAAGAGTGATACAAATGTAAGTAATGAAAACAATAGTAACACAGCCATACAA
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7082
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

15-52708495-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708495
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708495
    reference: chr 15
allele count: 3
allele frequency: 2.518807092960774e-5
allele num: 119104
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.459T>C
  hgvsp: ENST00000399231.3:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.142T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.459T>C
  hgvsp: ENST00000356338.6:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.459T>C
  hgvsp: ENST00000358212.6:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*143T>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.459T>C
  hgvsp: ENST00000553916.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.459T>C
  hgvsp: ENST00000399233.2:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7468
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35776
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp153Asp
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

15-52708496-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708496
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708496
    reference: chr 15
allele count: 1
allele frequency: 8.396728634523989e-6
allele num: 119094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.458A>T
  hgvsp: ENSP00000348693.6:p.Asp153Val
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*142A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.458A>T
  hgvsp: ENSP00000382177.3:p.Asp153Val
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.458A>T
  hgvsp: ENSP00000451109.1:p.Asp153Val
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.141A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.458A>T
  hgvsp: ENSP00000382179.2:p.Asp153Val
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.458A>T
  hgvsp: ENSP00000350945.6:p.Asp153Val
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7068
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1682
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp153Val
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

15-52708502-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708502
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708502
    reference: chr 15
allele count: 7297
allele frequency: 6.21201028382681e-2
allele num: 117466
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-4A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-4A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-4A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-4A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-4A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-4A>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-4A>G
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12097
  bin: 3.25e1
  variant carriers: 706
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.75e1
  variant carriers: 838
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.75e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.25e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 5.75e1
  variant carriers: 500
genotype depth: GenotypeDepth
  all individuals: 19948
  bin: 2.75e1
  variant carriers: 494
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 3.75e1
  variant carriers: 865
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.25e1
  variant carriers: 885
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 5.25e1
  variant carriers: 705
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 9.75e1
  variant carriers: 466
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 2.25e1
  variant carriers: 258
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 6.25e1
  variant carriers: 353
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 31186
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 2
hgvs: c.456-4A>G
num of homozygotes: 316
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

15-52708512-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708512
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708512
    reference: chr 15
allele count: 1
allele frequency: 8.820208862545865e-6
allele num: 113376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-14T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-14T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-14T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-14T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-14T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-14T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-14T>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10899
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4473
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5362
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP

15-52708515-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708515
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708515
    reference: chr 15
allele count: 1
allele frequency: 8.925383791503035e-6
allele num: 112040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-17A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-17A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-17A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-17A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-17A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-17A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-17A>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23653
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

15-52708518-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708518
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708518
    reference: chr 15
allele count: 9
allele frequency: 8.237986270022883e-5
allele num: 109250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-20A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-20A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-20A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-20A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-20A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-20A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-20A>T
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13305
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15027
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7334
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13857
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5256
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

15-52708518-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708518
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708519
    reference: chr 15
allele count: 16
allele frequency: 1.464530892448513e-4
allele num: 109250
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-21dupT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-21dupT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-21dupT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-21dupT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-21dupT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-21dupT
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-21dupT
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7334
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13305
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13857
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3818
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5256
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3285
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 20233
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

15-52708519-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708519
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708519
    reference: chr 15
allele count: 1
allele frequency: 9.151810228063111e-6
allele num: 109268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-21T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-21T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-21T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-21T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-21T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-21T>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-21T>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7472
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14267
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4026
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5257
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

15-52708524-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708524
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708524
    reference: chr 15
allele count: 1
allele frequency: 9.27265309150254e-6
allele num: 107844
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-26C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-26C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-26C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-26C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-26C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-26C>A
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-26C>A
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10889
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4733
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5258
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

15-52708525-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708525
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708525
    reference: chr 15
allele count: 1
allele frequency: 9.378751500600239e-6
allele num: 106624
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-27A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-27A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-27A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-27A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-27A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-27A>T
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-27A>T
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18687
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9412
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5254
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7696
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-52708527-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708527
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708527
    reference: chr 15
allele count: 20
allele frequency: 1.928417155199013e-4
allele num: 103712
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-29T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-29T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-29T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-29T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-29T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-29T>G
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-29T>G
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12212
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18888
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5367
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7853
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

15-52708529-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 52708529
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 52708529
    reference: chr 15
allele count: 6
allele frequency: 5.833738454059309e-5
allele num: 102850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl transcript: ENST00000561810
  gene symbol: MYO5A
  hgvsc: ENST00000561810.1:n.139-31A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000350945
  ensembl transcript: ENST00000358212
  gene symbol: MYO5A
  hgvsc: ENST00000358212.6:c.456-31A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382179
  ensembl transcript: ENST00000399233
  gene symbol: MYO5A
  hgvsc: ENST00000399233.2:c.456-31A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000348693
  ensembl transcript: ENST00000356338
  gene symbol: MYO5A
  hgvsc: ENST00000356338.6:c.456-31A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000382177
  ensembl transcript: ENST00000399231
  gene symbol: MYO5A
  hgvsc: ENST00000399231.3:c.456-31A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451178
  ensembl transcript: ENST00000556196
  gene symbol: MYO5A
  hgvsc: ENST00000556196.1:c.*140-31A>C
  variant of: http://identifiers.org/hgnc/7602
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000197535
  ensembl protein: ENSP00000451109
  ensembl transcript: ENST00000553916
  gene symbol: MYO5A
  hgvsc: ENST00000553916.1:c.456-31A>C
  variant of: http://identifiers.org/hgnc/7602
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13330
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19037
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6452
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1630
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1951
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35710
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.643603436266543e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.015337e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 4.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.4e0

QD
type: SiteQuality
SIO_000300: 1.614e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35706
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3514
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6649
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.135e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.015427e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.93e-1

FS
type: SiteQuality
SIO_000300: 2.888e0

QD
type: SiteQuality
SIO_000300: 1.151e1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35707
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1938
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

MQ
type: SiteQuality
SIO_000300: 5.935e1

FS
type: SiteQuality
SIO_000300: 2.675e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.586e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 3.015472e6

QD
type: SiteQuality
SIO_000300: 1.406e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1940
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.64e0

FS
type: SiteQuality
SIO_000300: 1.267e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 1.596e1

DP
type: SiteQuality
SIO_000300: 3.015617e6

VQSLOD
type: SiteQuality
SIO_000300: 1.95e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.041232904674423e-4
allele num: 9798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.015679e6

VQSLOD
type: SiteQuality
SIO_000300: -3.145e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.02e0

QD
type: SiteQuality
SIO_000300: 1.454e1

MQ
type: SiteQuality
SIO_000300: 5.89e1

FS
type: SiteQuality
SIO_000300: 8.691000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.55e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1965
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variant carriers: 0

GenotypeQuality
all individuals: 6690
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.843e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

QD
type: SiteQuality
SIO_000300: 1.116e1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.78e0

DP
type: SiteQuality
SIO_000300: 3.015555e6

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6702
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.224739742804654e-3
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.457216940363008e-4
allele num: 11570
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

DP
type: SiteQuality
SIO_000300: 3.016405e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.165e1

FS
type: SiteQuality
SIO_000300: 1.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.182e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6702
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.093e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.402e0

VQSLOD
type: SiteQuality
SIO_000300: -5.515e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.936e1

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

QD
type: SiteQuality
SIO_000300: 1.054e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.95e0

DP
type: SiteQuality
SIO_000300: 3.0148e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35698
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1964
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

DP
type: SiteQuality
SIO_000300: 3.01495e6

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.243e1

FS
type: SiteQuality
SIO_000300: 1.294e0

VQSLOD
type: SiteQuality
SIO_000300: 9.55e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

DP
type: SiteQuality
SIO_000300: 3.014763e6

FS
type: SiteQuality
SIO_000300: 5.18e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.827e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.431e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.166e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3517
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.113e0

VQSLOD
type: SiteQuality
SIO_000300: 6.01e-1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.353e0

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3705
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.040816326530612e-4
allele num: 9800
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

QD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.53857791225416e-4
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.992536194958184e-5
allele num: 66722
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.014556e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.227e1

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 35

GenotypeQuality
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GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 3317
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 32
allele frequency: 3.26530612244898e-3
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.435e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e0

MQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 3.014791e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.698e0

MQRankSum
type: SiteQuality
SIO_000300: -1.077e0

MQ
type: SiteQuality
SIO_000300: 5.856e1

DP
type: SiteQuality
SIO_000300: 3.010915e6

FS
type: SiteQuality
SIO_000300: 1.909e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e0

QD
type: SiteQuality
SIO_000300: 1.363e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1966
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 3479
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 4.9e0

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

DP
type: SiteQuality
SIO_000300: 3.010494e6

MQ
type: SiteQuality
SIO_000300: 5.98e1

QD
type: SiteQuality
SIO_000300: 1.398e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.402e0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1965
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3695
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variant carriers: 0

GenotypeQuality
all individuals: 3518
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

DP
type: SiteQuality
SIO_000300: 3.009884e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.663e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

QD
type: SiteQuality
SIO_000300: 1.319e1

FS
type: SiteQuality
SIO_000300: 5.81e-1

GenotypeQuality
all individuals: 6521
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35672
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.006963e6

MQRankSum
type: SiteQuality
SIO_000300: -6.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.207e0

QD
type: SiteQuality
SIO_000300: 3.243e1

FS
type: SiteQuality
SIO_000300: 2.293e0

VQSLOD
type: SiteQuality
SIO_000300: -3.142e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3298
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
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variant carriers: 0

GenotypeQuality
all individuals: 35670
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 4.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e0

QD
type: SiteQuality
SIO_000300: 1.507e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

DP
type: SiteQuality
SIO_000300: 3.004613e6

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3292
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.933e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.26e-1

FS
type: SiteQuality
SIO_000300: 2.725e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

DP
type: SiteQuality
SIO_000300: 3.003619e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3631
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002732486562772e-5
allele num: 66606
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.426e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.2e-2

DP
type: SiteQuality
SIO_000300: 3.002547e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 3.228e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35667
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.027960526315789e-4
allele num: 9728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

MQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

DP
type: SiteQuality
SIO_000300: 2.996707e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
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SIO_000300: 4.72e-1

InbreedingCoeff
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VQSLOD
type: SiteQuality
SIO_000300: 4.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-1

QD
type: SiteQuality
SIO_000300: 1.646e1

GenotypeQuality
all individuals: 193
bin: 3.25e1
variant carriers: 3

GenotypeQuality
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bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2875
bin: 8.25e1
variant carriers: 19

GenotypeQuality
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variant carriers: 10

GenotypeQuality
all individuals: 1614
bin: 8.75e1
variant carriers: 19

GenotypeQuality
all individuals: 2750
bin: 9.25e1
variant carriers: 26

GenotypeQuality
all individuals: 5452
bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 39062
bin: 9.75e1
variant carriers: 16673

Latino
type: Population
allele count: 1553
allele frequency: 1.346687478321193e-1
allele num: 11532
num of homozygotes: 128

South Asian
type: Population
allele count: 2364
allele frequency: 1.432380029083858e-1
allele num: 16504
num of homozygotes: 187

Other
type: Population
allele count: 151
allele frequency: 1.677777777777778e-1
allele num: 900
num of homozygotes: 11

European (Non-Finnish)
type: Population
allele count: 11029
allele frequency: 1.659095011733558e-1
allele num: 66476
num of homozygotes: 933

African
type: Population
allele count: 948
allele frequency: 9.753086419753086e-2
allele num: 9720
num of homozygotes: 46

European (Finnish)
type: Population
allele count: 803
allele frequency: 1.218882817243473e-1
allele num: 6588
num of homozygotes: 55

East Asian
type: Population
allele count: 1479
allele frequency: 1.726996730499767e-1
allele num: 8564
num of homozygotes: 131

MQ
type: SiteQuality
SIO_000300: 5.927e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

DP
type: SiteQuality
SIO_000300: 3.024024e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

QD
type: SiteQuality
SIO_000300: 1.713e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.22e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

GenotypeQuality
all individuals: 2112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31240
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2160
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66466
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.133e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.82e-1

FS
type: SiteQuality
SIO_000300: 6.576e0

DP
type: SiteQuality
SIO_000300: 2.720441e6

VQSLOD
type: SiteQuality
SIO_000300: -1.22e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.45e-1

QD
type: SiteQuality
SIO_000300: 1.864e1

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3883
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31234
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3722
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506795648374167e-5
allele num: 66366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

QD
type: SiteQuality
SIO_000300: 4.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.42e-1

FS
type: SiteQuality
SIO_000300: 6.107e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.556e0

DP
type: SiteQuality
SIO_000300: 2.704066e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: -8.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3880
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3671
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31233
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506341698550899e-5
allele num: 66386
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.775e0

QD
type: SiteQuality
SIO_000300: 3.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 3.736e0

DP
type: SiteQuality
SIO_000300: 2.702703e6

MQ
type: SiteQuality
SIO_000300: 5.681e1

GenotypeQuality
all individuals: 211
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4945
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3798
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 2.699767e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

FS
type: SiteQuality
SIO_000300: 3.025e0

VQSLOD
type: SiteQuality
SIO_000300: -1.804e-1

QD
type: SiteQuality
SIO_000300: 1.006e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 442
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3670
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2146
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3874
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.170138076293003e-4
allele num: 8546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 23
allele frequency: 2.382432152475658e-3
allele num: 9654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.603714632876237e-4
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

MQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.143e0

DP
type: SiteQuality
SIO_000300: 2.69839e6

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

QD
type: SiteQuality
SIO_000300: 1.469e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
all individuals: 1931
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7228
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2290
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33095
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503036132988637e-5
allele num: 66532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.053e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.096e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQ
type: SiteQuality
SIO_000300: 5.848e1

DP
type: SiteQuality
SIO_000300: 1.881984e6

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2246
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1915
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7213
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 700
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

QD
type: SiteQuality
SIO_000300: 1.132e1

DP
type: SiteQuality
SIO_000300: 1.882371e6

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1824
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7193
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 36969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00390507659958e-5
allele num: 66580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.899009e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.26e-1

FS
type: SiteQuality
SIO_000300: 3.153e0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
all individuals: 672
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37040
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7200
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2064
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.02124183006536e-3
allele num: 9792
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.899989e6

QD
type: SiteQuality
SIO_000300: 1.609e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.13e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

MQ
type: SiteQuality
SIO_000300: 6.023e1

VQSLOD
type: SiteQuality
SIO_000300: 3.43e0

FS
type: SiteQuality
SIO_000300: 1.404e0

GenotypeQuality
all individuals: 1346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7193
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2048
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37449
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.713837574067619e-5
allele num: 11476
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.18e-1

DP
type: SiteQuality
SIO_000300: 1.903914e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-2

FS
type: SiteQuality
SIO_000300: 3.441e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -6.879999999999999e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.44e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.308e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: -1.048e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.719e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.75e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
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allele count: 5
allele frequency: 3.031037827352086e-4
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.38e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.91e0

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.097e1

DP
type: SiteQuality
SIO_000300: 1.906619e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.906619e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.097e1

VQSLOD
type: SiteQuality
SIO_000300: 4.91e0

GenotypeQuality
all individuals: 7200
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 140
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variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818402230573403e-4
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

QD
type: SiteQuality
SIO_000300: 1.28e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

DP
type: SiteQuality
SIO_000300: 1.90744e6

FS
type: SiteQuality
SIO_000300: 7.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-2

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8034
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.06134076857801e-4
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 1.90744e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.28e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.494060097833683e-4
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

DP
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SIO_000300: 1.908125e6

InbreedingCoeff
type: SiteQuality
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MQRankSum
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VQSLOD
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

QD
type: SiteQuality
SIO_000300: 1.097e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.909885e6

BaseQRankSum
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QD
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SIO_000300: 9.289999999999999e0

FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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DP
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MQ
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.999520038396928e-5
allele num: 66672
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.53e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.212e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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SIO_000300: -1.62e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.912249e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.47e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.830000000000001e-1

BaseQRankSum
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SIO_000300: -3.502e0

DP
type: SiteQuality
SIO_000300: 1.913238e6

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.891e0

DP
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SIO_000300: 1.913322e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.588e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

FS
type: SiteQuality
SIO_000300: 4.244e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.163e1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998500749625187e-5
allele num: 66700
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.17e-2

QD
type: SiteQuality
SIO_000300: 2.094e1

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.797e0

DP
type: SiteQuality
SIO_000300: 1.913472e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

FS
type: SiteQuality
SIO_000300: 3.129e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.18e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1824
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.285e1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 5.844e1

DP
type: SiteQuality
SIO_000300: 1.914231e6

VQSLOD
type: SiteQuality
SIO_000300: -1.252e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.304e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

FS
type: SiteQuality
SIO_000300: 7.488e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.914293e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.464e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.46e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.143e1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 1.914287e6

QD
type: SiteQuality
SIO_000300: 1.302e1

FS
type: SiteQuality
SIO_000300: 8.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
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allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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FS
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MQ
type: SiteQuality
SIO_000300: 5.923e1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997961386257345e-5
allele num: 66712
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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South Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.914651e6

MQRankSum
type: SiteQuality
SIO_000300: 8.92e-1

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.338e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.78e-1

FS
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

MQRankSum
type: SiteQuality
SIO_000300: 9.44e-1

DP
type: SiteQuality
SIO_000300: 1.914576e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 1334
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1820
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998231043684226e-5
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.422e0

DP
type: SiteQuality
SIO_000300: 1.91463e6

QD
type: SiteQuality
SIO_000300: 1.009e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.32e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

DP
type: SiteQuality
SIO_000300: 1.914379e6

MQ
type: SiteQuality
SIO_000300: 5.904e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.41e0

VQSLOD
type: SiteQuality
SIO_000300: -2.054e-1

QD
type: SiteQuality
SIO_000300: 1.476e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8062
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.949200827660659e-4
allele num: 66694
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.943239021003298e-4
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.351e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.28e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 1.287e0

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

DP
type: SiteQuality
SIO_000300: 1.914838e6

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

GenotypeQuality
all individuals: 1333
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38097
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.71e-1

FS
type: SiteQuality
SIO_000300: 5.139e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.114e0

DP
type: SiteQuality
SIO_000300: 1.913668e6

MQRankSum
type: SiteQuality
SIO_000300: -5.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.071e-1

QD
type: SiteQuality
SIO_000300: 1.33e1

MQ
type: SiteQuality
SIO_000300: 5.878e1

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1333
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variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.52e0

DP
type: SiteQuality
SIO_000300: 1.913133e6

FS
type: SiteQuality
SIO_000300: 2.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737921445950643e-4
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.251e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.201e1

DP
type: SiteQuality
SIO_000300: 1.913226e6

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

FS
type: SiteQuality
SIO_000300: 4.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.97e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 220

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 58
allele frequency: 8.697999460124171e-4
allele num: 66682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 161
allele frequency: 2.438654953044532e-2
allele num: 6602
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.454342984409799e-3
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.919788e6

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.46e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 2005
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.649e0

DP
type: SiteQuality
SIO_000300: 1.91109e6

QD
type: SiteQuality
SIO_000300: 6.899999999999999e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.762e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQ
type: SiteQuality
SIO_000300: 4.987e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7070
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.554010565304512e-5
allele num: 65876
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
SIO_000300: 6.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.869714e6

GenotypeQuality
all individuals: 1262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35874
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518003521768171e-5
allele num: 65876
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 9.127000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: -1.072e0

MQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

DP
type: SiteQuality
SIO_000300: 1.869372e6

QD
type: SiteQuality
SIO_000300: 1.225e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

GenotypeQuality
all individuals: 278
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 553
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 674
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1199
bin: 7.75e1
variant carriers: 13

GenotypeQuality
all individuals: 4474
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 11585
bin: 9.75e1
variant carriers: 6903

GenotypeQuality
all individuals: 335
bin: 8.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1271
bin: 7.25e1
variant carriers: 8

GenotypeQuality
all individuals: 6351
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 3207
allele frequency: 4.940078252564774e-2
allele num: 64918
num of homozygotes: 80

Latino
type: Population
allele count: 663
allele frequency: 5.88809946714032e-2
allele num: 11260
num of homozygotes: 26

African
type: Population
allele count: 294
allele frequency: 3.099304237824162e-2
allele num: 9486
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 419
allele frequency: 6.460067838421214e-2
allele num: 6486
num of homozygotes: 14

Other
type: Population
allele count: 63
allele frequency: 7.208237986270023e-2
allele num: 874
num of homozygotes: 2

East Asian
type: Population
allele count: 1478
allele frequency: 1.755344418052256e-1
allele num: 8420
num of homozygotes: 132

South Asian
type: Population
allele count: 1173
allele frequency: 7.321183372862314e-2
allele num: 16022
num of homozygotes: 56

DP
type: SiteQuality
SIO_000300: 1.906025e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

QD
type: SiteQuality
SIO_000300: 1.652e1

VQSLOD
type: SiteQuality
SIO_000300: 6.15e0

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.48e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.34e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 28022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2730
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8090
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.117432530999271e-5
allele num: 10968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.242e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.443e-1

QD
type: SiteQuality
SIO_000300: 1.041e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.580772e6

GenotypeQuality
all individuals: 723
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3201
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5355
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 366
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3814
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7988
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.219988936013277e-5
allele num: 10846
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.934e1

MQRankSum
type: SiteQuality
SIO_000300: -5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.504794e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.83e-1

QD
type: SiteQuality
SIO_000300: 1.753e1

VQSLOD
type: SiteQuality
SIO_000300: -6.137e-1

GenotypeQuality
all individuals: 20233
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4883
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3818
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 523
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 4.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.667222407469156e-4
allele num: 5998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.666355576294914e-4
allele num: 8572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.01018738100805e-5
allele num: 59878
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.485925541574782e-5
allele num: 15418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10712
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.443638e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: -1.937e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.661e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.588e0

FS
type: SiteQuality
SIO_000300: 4.571e0

MQ
type: SiteQuality
SIO_000300: 5.996e1

GenotypeQuality
all individuals: 517
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 299
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 648
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2491
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4883
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 556
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.333777925975325e-3
allele num: 5998
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10712
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.271294177472667e-4
allele num: 7866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.00203747620161e-4
allele num: 59878
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.588e0

MQ
type: SiteQuality
SIO_000300: 5.996e1

VQSLOD
type: SiteQuality
SIO_000300: -1.937e0

DP
type: SiteQuality
SIO_000300: 1.443638e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.661e0

FS
type: SiteQuality
SIO_000300: 4.571e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

QD
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19197
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5253
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 526
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10708
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.669281874937402e-5
allele num: 59906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 4.57e-1

FS
type: SiteQuality
SIO_000300: 3.596e0

DP
type: SiteQuality
SIO_000300: 1.420966e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1315
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.30718954248366e-4
allele num: 7650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

QD
type: SiteQuality
SIO_000300: 8.51e0

VQSLOD
type: SiteQuality
SIO_000300: -2.052e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.584e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.977e0

MQRankSum
type: SiteQuality
SIO_000300: -6.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.06e-1

DP
type: SiteQuality
SIO_000300: 1.294075e6

MQ
type: SiteQuality
SIO_000300: 5.812e1

GenotypeQuality
all individuals: 15075
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5362
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1663
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 525
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.717209877391215e-5
allele num: 58234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10502
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 7.508e0

VQSLOD
type: SiteQuality
SIO_000300: 3.96e-1

MQ
type: SiteQuality
SIO_000300: 5.854e1

MQRankSum
type: SiteQuality
SIO_000300: -2.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.564e0

DP
type: SiteQuality
SIO_000300: 1.262851e6

QD
type: SiteQuality
SIO_000300: 4.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
all individuals: 14769
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 8020
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 230
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2007
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5532
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5224
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1915
bin: 6.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.408450704225352e-3
allele num: 5680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14976
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.338688085676038e-4
allele num: 7470
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.257861635220126e-4
allele num: 7950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.771165426850868e-4
allele num: 56460
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.237374e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

FS
type: SiteQuality
SIO_000300: 4.827e0

VQSLOD
type: SiteQuality
SIO_000300: -2.966e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.85e0

GenotypeQuality
all individuals: 493
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8427
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5622
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5236
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 6232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5535
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7872
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.075533215595707e-4
allele num: 14722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0